RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-201ENST00000261897 EFCAB2Q5VUJ9 269 aa19.25■□□□□ 0.67
PRPF40B-201ENST00000261897 BCL2L12Q9HB09 334 aa19.25■□□□□ 0.67
PRPF40B-201ENST00000261897 DIAPH3Q9NSV4 1193 aa19.25■□□□□ 0.67
PRPF40B-201ENST00000261897 FERMT3Q86UX7 667 aa19.24■□□□□ 0.67
PRPF40B-201ENST00000261897 ERC2O15083 957 aa19.24■□□□□ 0.67
PRPF40B-201ENST00000261897 KRT24Q2M2I5 525 aa19.24■□□□□ 0.67
PRPF40B-201ENST00000261897 USP48Q86UV5 1035 aa19.24■□□□□ 0.67
PRPF40B-201ENST00000261897 PLEKHM2Q8IWE5 1019 aa19.23■□□□□ 0.67
PRPF40B-201ENST00000261897 MYRIPQ8NFW9 859 aa19.23■□□□□ 0.67
PRPF40B-201ENST00000261897 USP26Q9BXU7 913 aa19.23■□□□□ 0.67
PRPF40B-201ENST00000261897 NUTM2FA1L443 756 aa19.23■□□□□ 0.67
PRPF40B-201ENST00000261897 HS1BP3Q53T59 392 aa19.23■□□□□ 0.67
PRPF40B-201ENST00000261897 CNPY2Q9Y2B0 182 aa19.23■□□□□ 0.67
PRPF40B-201ENST00000261897 FOSBP53539 338 aa19.22■□□□□ 0.67
PRPF40B-201ENST00000261897 RIOK3O14730 519 aaKnown RBP19.22■□□□□ 0.67
PRPF40B-201ENST00000261897 TRIM35Q9UPQ4 493 aa19.22■□□□□ 0.67
PRPF40B-201ENST00000261897 TRIM5Q9C035 493 aa19.21■□□□□ 0.67
PRPF40B-201ENST00000261897 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
PRPF40B-201ENST00000261897 NAP1L2Q9ULW6 460 aaPredicted RBP19.21■□□□□ 0.67
PRPF40B-201ENST00000261897 SCAF11Q99590 1463 aaKnown RBP19.21■□□□□ 0.67
PRPF40B-201ENST00000261897 GOLGA6L6A8MZA4 724 aa19.21■□□□□ 0.67
PRPF40B-201ENST00000261897 DMTNQ08495 405 aa19.21■□□□□ 0.67
PRPF40B-201ENST00000261897 TTC22Q5TAA0 569 aa19.21■□□□□ 0.67
PRPF40B-201ENST00000261897 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-201ENST00000261897 FGD1P98174 961 aa19.2■□□□□ 0.66
PRPF40B-201ENST00000261897 KANK1Q14678 1352 aa19.2■□□□□ 0.66
PRPF40B-201ENST00000261897 MCM5P33992 734 aa19.2■□□□□ 0.66
PRPF40B-201ENST00000261897 OS9Q13438 667 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-201ENST00000261897 TPD52L1Q16890 204 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-201ENST00000261897 CKAP2LQ8IYA6 745 aa19.2■□□□□ 0.66
PRPF40B-201ENST00000261897 IL1RAPL2Q9NP60 686 aa19.2■□□□□ 0.66
PRPF40B-201ENST00000261897 DDIT3P35638 169 aa19.19■□□□□ 0.66
PRPF40B-201ENST00000261897 EVC2Q86UK5 1308 aa19.19■□□□□ 0.66
PRPF40B-201ENST00000261897 API5Q9BZZ5 524 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-201ENST00000261897 POLR3AO14802 1390 aaPredicted RBP19.19■□□□□ 0.66
PRPF40B-201ENST00000261897 F6X3S4 739 aa19.19■□□□□ 0.66
PRPF40B-201ENST00000261897 RTF1Q92541 710 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-201ENST00000261897 TNNT3P45378 269 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-201ENST00000261897 SMC3Q9UQE7 1217 aa19.18■□□□□ 0.66
PRPF40B-201ENST00000261897 TERF1P54274 439 aa19.18■□□□□ 0.66
PRPF40B-201ENST00000261897 AEBP1Q8IUX7 1158 aa19.18■□□□□ 0.66
PRPF40B-201ENST00000261897 NAA30Q147X3 362 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-201ENST00000261897 ARHGAP5Q13017 1502 aa19.17■□□□□ 0.66
PRPF40B-201ENST00000261897 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-201ENST00000261897 ZSCAN20P17040 1043 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-201ENST00000261897 SIRT2Q8IXJ6 389 aa19.17■□□□□ 0.66
PRPF40B-201ENST00000261897 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-201ENST00000261897 ZDHHC9Q9Y397 364 aa19.17■□□□□ 0.66
PRPF40B-201ENST00000261897 PLA2R1Q13018 1463 aa19.16■□□□□ 0.66
PRPF40B-201ENST00000261897 GORABQ5T7V8 394 aa19.16■□□□□ 0.66
PRPF40B-201ENST00000261897 C8orf58Q8NAV2 365 aa19.16■□□□□ 0.66
PRPF40B-201ENST00000261897 PTPRGP23470 1445 aa19.16■□□□□ 0.66
PRPF40B-201ENST00000261897 CEBPZQ03701 1054 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-201ENST00000261897 ZFP91Q96JP5 570 aaPredicted RBP19.16■□□□□ 0.66
PRPF40B-201ENST00000261897 PHACTR3Q96KR7 559 aa19.16■□□□□ 0.66
PRPF40B-201ENST00000261897 PRIMPOLQ96LW4 560 aa19.16■□□□□ 0.66
PRPF40B-201ENST00000261897 TERF2IPQ9NYB0 399 aa19.16■□□□□ 0.66
PRPF40B-201ENST00000261897 HMMRO75330 724 aa19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 PTGS1P23219 599 aa19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 TRMT1Q9NXH9 659 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 CT47B1P0C2W7 299 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 CFAP44Q96MT7 982 aa19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 CCDC141Q6ZP82 1450 aa19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 CPA1P15085 419 aa19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 PDLIM2Q96JY6 352 aa19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 MEIS3Q99687 375 aa19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 KDM5DQ9BY66 1539 aa19.15■□□□□ 0.66
PRPF40B-201ENST00000261897 PYCARDQ9ULZ3 195 aa19.14■□□□□ 0.66
PRPF40B-201ENST00000261897 GNAI1P63096 354 aa19.14■□□□□ 0.65
PRPF40B-201ENST00000261897 PIBF1Q8WXW3 757 aa19.14■□□□□ 0.65
PRPF40B-201ENST00000261897 CCDC112Q8NEF3 446 aa19.14■□□□□ 0.65
PRPF40B-201ENST00000261897 RTEL1-TNFRSF6BF6WH68 1400 aa19.14■□□□□ 0.65
PRPF40B-201ENST00000261897 FILIP1Q7Z7B0 1213 aa19.13■□□□□ 0.65
PRPF40B-201ENST00000261897 MBIPQ9NS73 344 aa19.13■□□□□ 0.65
PRPF40B-201ENST00000261897 ZNF710Q8N1W2 664 aa19.13■□□□□ 0.65
PRPF40B-201ENST00000261897 PALD1Q9ULE6 856 aa19.13■□□□□ 0.65
PRPF40B-201ENST00000261897 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
PRPF40B-201ENST00000261897 TNNT1P13805 278 aa19.12■□□□□ 0.65
PRPF40B-201ENST00000261897 ADGRL2O95490 1459 aa19.12■□□□□ 0.65
PRPF40B-201ENST00000261897 FAM173BQ6P4H8 233 aa19.12■□□□□ 0.65
PRPF40B-201ENST00000261897 CCDC186Q7Z3E2 898 aa19.12■□□□□ 0.65
PRPF40B-201ENST00000261897 BICD2Q8TD16 824 aa19.12■□□□□ 0.65
PRPF40B-201ENST00000261897 SYTL4Q96C24 671 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-201ENST00000261897 WDR33Q9C0J8 1336 aaKnown RBP19.12■□□□□ 0.65
PRPF40B-201ENST00000261897 LRMPQ12912 555 aa19.11■□□□□ 0.65
PRPF40B-201ENST00000261897 CCDC183Q5T5S1 534 aa19.11■□□□□ 0.65
PRPF40B-201ENST00000261897 VAMP4O75379 141 aa19.11■□□□□ 0.65
PRPF40B-201ENST00000261897 RRS1Q15050 365 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-201ENST00000261897 NUTM1Q86Y26 1132 aa19.11■□□□□ 0.65
PRPF40B-201ENST00000261897 CCDC83Q8IWF9 413 aa19.11■□□□□ 0.65
PRPF40B-201ENST00000261897 PPIP5K1Q6PFW1 1433 aa19.11■□□□□ 0.65
PRPF40B-201ENST00000261897 RAPGEF6Q8TEU7 1601 aa19.11■□□□□ 0.65
PRPF40B-201ENST00000261897 TFIP11Q9UBB9 837 aaKnown RBP19.1■□□□□ 0.65
PRPF40B-201ENST00000261897 MRPL50Q8N5N7 158 aaKnown RBP19.1■□□□□ 0.65
PRPF40B-201ENST00000261897 CABP1Q9NZU7 370 aa19.1■□□□□ 0.65
PRPF40B-201ENST00000261897 PPFIA3O75145 1194 aa19.1■□□□□ 0.65
PRPF40B-201ENST00000261897 LETM1O95202 739 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-201ENST00000261897 SCAPERQ9BY12 1400 aa19.09■□□□□ 0.65
PRPF40B-201ENST00000261897 MCM10Q7L590 875 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms