RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 MST1RQ04912 1400 aa29.24■■■□□ 2.27
SIX3-201ENST00000260653 TRIM35Q9UPQ4 493 aa29.24■■■□□ 2.27
SIX3-201ENST00000260653 FLT4P35916 1363 aa29.24■■■□□ 2.27
SIX3-201ENST00000260653 PHACTR3Q96KR7 559 aa29.23■■■□□ 2.27
SIX3-201ENST00000260653 KIF1AQ12756 1690 aa29.23■■■□□ 2.27
SIX3-201ENST00000260653 RIPK4P57078 832 aa29.22■■■□□ 2.27
SIX3-201ENST00000260653 BCL11AQ9H165 835 aa29.22■■■□□ 2.27
SIX3-201ENST00000260653 XIRP1Q702N8 1843 aaKnown RBP29.21■■■□□ 2.27
SIX3-201ENST00000260653 NEFMP07197 916 aa29.21■■■□□ 2.27
SIX3-201ENST00000260653 PPP4R2Q9NY27 417 aa29.21■■■□□ 2.27
SIX3-201ENST00000260653 AMPHP49418 695 aa29.2■■■□□ 2.27
SIX3-201ENST00000260653 RGPD1P0DJD0 1748 aa29.19■■■□□ 2.26
SIX3-201ENST00000260653 PLIN1O60240 522 aa29.19■■■□□ 2.26
SIX3-201ENST00000260653 AEBP1Q8IUX7 1158 aa29.19■■■□□ 2.26
SIX3-201ENST00000260653 ZNF335Q9H4Z2 1342 aaPredicted RBP29.18■■■□□ 2.26
SIX3-201ENST00000260653 TRPM3Q9HCF6 1732 aaPredicted RBP29.17■■■□□ 2.26
SIX3-201ENST00000260653 MSH6P52701 1360 aa29.17■■■□□ 2.26
SIX3-201ENST00000260653 SULT6B1Q6IMI4 303 aa29.16■■■□□ 2.26
SIX3-201ENST00000260653 CADPS2Q86UW7 1296 aa29.16■■■□□ 2.26
SIX3-201ENST00000260653 NFE2L2Q16236 605 aa29.15■■■□□ 2.26
SIX3-201ENST00000260653 KRT28Q7Z3Y7 464 aa29.15■■■□□ 2.26
SIX3-201ENST00000260653 NFAT5O94916 1531 aa29.15■■■□□ 2.26
SIX3-201ENST00000260653 HOXC9P31274 260 aa29.14■■■□□ 2.26
SIX3-201ENST00000260653 LTN1O94822 1766 aa29.14■■■□□ 2.25
SIX3-201ENST00000260653 KIF24Q5T7B8 1368 aa29.13■■■□□ 2.25
SIX3-201ENST00000260653 MYH16Q9H6N6 1097 aa29.13■■■□□ 2.25
SIX3-201ENST00000260653 LMOD2Q6P5Q4 547 aa29.11■■■□□ 2.25
SIX3-201ENST00000260653 ARHGEF10O15013 1369 aa29.11■■■□□ 2.25
SIX3-201ENST00000260653 DLG5Q8TDM6 1919 aa29.1■■■□□ 2.25
SIX3-201ENST00000260653 DDX17Q92841 729 aaKnown RBP29.1■■■□□ 2.25
SIX3-201ENST00000260653 B4GALNT3Q6L9W6 998 aa29.1■■■□□ 2.25
SIX3-201ENST00000260653 TSR2Q969E8 191 aaKnown RBP29.09■■■□□ 2.25
SIX3-201ENST00000260653 FANCIQ9NVI1 1328 aa29.09■■■□□ 2.25
SIX3-201ENST00000260653 IL16Q14005 1332 aa29.08■■■□□ 2.25
SIX3-201ENST00000260653 PLEKHG5O94827 1062 aa29.08■■■□□ 2.25
SIX3-201ENST00000260653 RTL1A6NKG5 1358 aa29.08■■■□□ 2.25
SIX3-201ENST00000260653 KCNH5Q8NCM2 988 aa29.08■■■□□ 2.24
SIX3-201ENST00000260653 EXOC6Q8TAG9 804 aa29.08■■■□□ 2.24
SIX3-201ENST00000260653 BCAR3O75815 825 aa29.07■■■□□ 2.24
SIX3-201ENST00000260653 EYA1Q99502 592 aa29.07■■■□□ 2.24
SIX3-201ENST00000260653 SLIT3O75094 1523 aa29.06■■■□□ 2.24
SIX3-201ENST00000260653 IGSF1Q8N6C5 1336 aa29.06■■■□□ 2.24
SIX3-201ENST00000260653 ALS2Q96Q42 1657 aa29.05■■■□□ 2.24
SIX3-201ENST00000260653 C20orf194Q5TEA3 1177 aa29.04■■■□□ 2.24
SIX3-201ENST00000260653 THUMPD2Q9BTF0 503 aaKnown RBP29.04■■■□□ 2.24
SIX3-201ENST00000260653 KDRP35968 1356 aa29.04■■■□□ 2.24
SIX3-201ENST00000260653 USP19O94966 1318 aa29.04■■■□□ 2.24
SIX3-201ENST00000260653 GCP02774 474 aa29.03■■■□□ 2.24
SIX3-201ENST00000260653 LTV1Q96GA3 475 aaPredicted RBP29.03■■■□□ 2.24
SIX3-201ENST00000260653 ZBTB7CA1YPR0 619 aa29.02■■■□□ 2.24
SIX3-201ENST00000260653 IP6K1Q92551 441 aa29.02■■■□□ 2.24
SIX3-201ENST00000260653 NPHP3Q7Z494 1330 aa29.01■■■□□ 2.24
SIX3-201ENST00000260653 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.01■■■□□ 2.23
SIX3-201ENST00000260653 PHRF1Q9P1Y6 1649 aaKnown RBP29.01■■■□□ 2.23
SIX3-201ENST00000260653 FAM83GA6ND36 823 aa28.99■■■□□ 2.23
SIX3-201ENST00000260653 RARSP54136 660 aaKnown RBP28.99■■■□□ 2.23
SIX3-201ENST00000260653 LMOD3Q0VAK6 560 aa28.99■■■□□ 2.23
SIX3-201ENST00000260653 CRBNQ96SW2 442 aa28.99■■■□□ 2.23
SIX3-201ENST00000260653 EXOSC9Q06265 439 aaKnown RBP28.98■■■□□ 2.23
SIX3-201ENST00000260653 BRINP3Q76B58 766 aa28.97■■■□□ 2.23
SIX3-201ENST00000260653 PXDNQ92626 1479 aa28.97■■■□□ 2.23
SIX3-201ENST00000260653 ARHGEF25Q86VW2 580 aa28.97■■■□□ 2.23
SIX3-201ENST00000260653 MED1Q15648 1581 aaPredicted RBP28.97■■■□□ 2.23
SIX3-201ENST00000260653 CCDC136Q96JN2 1154 aa28.96■■■□□ 2.23
SIX3-201ENST00000260653 LAS1LQ9Y4W2 734 aaKnown RBP28.96■■■□□ 2.23
SIX3-201ENST00000260653 DCTN1Q14203 1278 aa28.96■■■□□ 2.23
SIX3-201ENST00000260653 CALD1Q05682 793 aaKnown RBP28.95■■■□□ 2.22
SIX3-201ENST00000260653 TNS3Q68CZ2 1445 aa28.94■■■□□ 2.22
SIX3-201ENST00000260653 BCL2L13Q9BXK5 485 aa28.93■■■□□ 2.22
SIX3-201ENST00000260653 SLAIN2Q9P270 581 aa28.93■■■□□ 2.22
SIX3-201ENST00000260653 CT47B1P0C2W7 299 aaPredicted RBP28.92■■■□□ 2.22
SIX3-201ENST00000260653 MTHFSDQ2M296 383 aaKnown RBP28.92■■■□□ 2.22
SIX3-201ENST00000260653 USHBP1Q8N6Y0 703 aa28.92■■■□□ 2.22
SIX3-201ENST00000260653 IFT57Q9NWB7 429 aa28.91■■■□□ 2.22
SIX3-201ENST00000260653 ZNF853P0CG23 659 aa28.9■■■□□ 2.22
SIX3-201ENST00000260653 GNAI1P63096 354 aa28.9■■■□□ 2.22
SIX3-201ENST00000260653 RGPD2P0DJD1 1756 aa28.89■■■□□ 2.22
SIX3-201ENST00000260653 SPATA31A3Q5VYP0 1347 aa28.89■■■□□ 2.21
SIX3-201ENST00000260653 NBPF6Q5VWK0 638 aa28.88■■■□□ 2.21
SIX3-201ENST00000260653 MCM10Q7L590 875 aa28.88■■■□□ 2.21
SIX3-201ENST00000260653 FRAT1Q92837 279 aaPredicted RBP28.88■■■□□ 2.21
SIX3-201ENST00000260653 NBPF4Q96M43 638 aa28.88■■■□□ 2.21
SIX3-201ENST00000260653 CANXP27824 592 aaKnown RBP28.88■■■□□ 2.21
SIX3-201ENST00000260653 ZC3H6P61129 1189 aaKnown RBP28.88■■■□□ 2.21
SIX3-201ENST00000260653 MBIPQ9NS73 344 aa28.88■■■□□ 2.21
SIX3-201ENST00000260653 CFAP44Q96MT7 982 aa28.87■■■□□ 2.21
SIX3-201ENST00000260653 CABLES1Q8TDN4 633 aa28.86■■■□□ 2.21
SIX3-201ENST00000260653 LRRC59Q96AG4 307 aaKnown RBP28.86■■■□□ 2.21
SIX3-201ENST00000260653 AXIN2Q9Y2T1 843 aa28.86■■■□□ 2.21
SIX3-201ENST00000260653 GAS2L2Q8NHY3 880 aa28.85■■■□□ 2.21
SIX3-201ENST00000260653 RGPD5Q99666 1765 aa28.84■■■□□ 2.21
SIX3-201ENST00000260653 CRYBG1Q9Y4K1 1723 aa28.83■■■□□ 2.21
SIX3-201ENST00000260653 ANKRD24Q8TF21 1146 aa28.83■■■□□ 2.21
SIX3-201ENST00000260653 PDE3AQ14432 1141 aa28.82■■■□□ 2.2
SIX3-201ENST00000260653 SSH1Q8WYL5 1049 aa28.82■■■□□ 2.2
SIX3-201ENST00000260653 SMC4Q9NTJ3 1288 aa28.82■■■□□ 2.2
SIX3-201ENST00000260653 PANK1Q8TE04 598 aa28.8■■■□□ 2.2
SIX3-201ENST00000260653 SOS2Q07890 1332 aaPredicted RBP28.8■■■□□ 2.2
SIX3-201ENST00000260653 RTF1Q92541 710 aaKnown RBP28.8■■■□□ 2.2
SIX3-201ENST00000260653 TSPYL6Q8N831 410 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms