RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 DTNBO60941 627 aa16.4■□□□□ 0.22
PGBD1-201ENST00000259883 ADGRB3O60242 1522 aa16.4■□□□□ 0.22
PGBD1-201ENST00000259883 GLI2P10070 1586 aa16.39■□□□□ 0.21
PGBD1-201ENST00000259883 VWDEQ8N2E2 1590 aa16.39■□□□□ 0.21
PGBD1-201ENST00000259883 ZGPATQ8N5A5 531 aaKnown RBP16.39■□□□□ 0.21
PGBD1-201ENST00000259883 RBM27Q9P2N5 1060 aaKnown RBP16.39■□□□□ 0.21
PGBD1-201ENST00000259883 KIAA1210Q9ULL0 1709 aa16.39■□□□□ 0.21
PGBD1-201ENST00000259883 F6X3S4 739 aa16.39■□□□□ 0.21
PGBD1-201ENST00000259883 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
PGBD1-201ENST00000259883 CDC45O75419 566 aa16.39■□□□□ 0.21
PGBD1-201ENST00000259883 RAB3GAP1Q15042 981 aa16.39■□□□□ 0.21
PGBD1-201ENST00000259883 KIDINS220Q9ULH0 1771 aa16.38■□□□□ 0.21
PGBD1-201ENST00000259883 GNAI1P63096 354 aa16.38■□□□□ 0.21
PGBD1-201ENST00000259883 NSD2O96028 1365 aa16.38■□□□□ 0.21
PGBD1-201ENST00000259883 ALDH1L2Q3SY69 923 aa16.38■□□□□ 0.21
PGBD1-201ENST00000259883 SULT6B1Q6IMI4 303 aa16.38■□□□□ 0.21
PGBD1-201ENST00000259883 UHRF1BP1LA0JNW5 1464 aa16.37■□□□□ 0.21
PGBD1-201ENST00000259883 NRXN1Q9ULB1 1477 aa16.37■□□□□ 0.21
PGBD1-201ENST00000259883 GCC1Q96CN9 775 aa16.37■□□□□ 0.21
PGBD1-201ENST00000259883 NASPP49321 788 aaPredicted RBP16.36■□□□□ 0.21
PGBD1-201ENST00000259883 PRPF40AO75400 957 aaKnown RBP16.36■□□□□ 0.21
PGBD1-201ENST00000259883 PLEKHM2Q8IWE5 1019 aa16.36■□□□□ 0.21
PGBD1-201ENST00000259883 BAG4O95429 457 aaKnown RBP16.36■□□□□ 0.21
PGBD1-201ENST00000259883 RNF214Q8ND24 703 aa16.36■□□□□ 0.21
PGBD1-201ENST00000259883 MEIS3Q99687 375 aa16.36■□□□□ 0.21
PGBD1-201ENST00000259883 CLCN1P35523 988 aa16.35■□□□□ 0.21
PGBD1-201ENST00000259883 ANP32BQ92688 251 aaKnown RBP16.35■□□□□ 0.21
PGBD1-201ENST00000259883 SNX21Q969T3 373 aa16.35■□□□□ 0.21
PGBD1-201ENST00000259883 IL16Q14005 1332 aa16.35■□□□□ 0.21
PGBD1-201ENST00000259883 CAMSAP1Q5T5Y3 1602 aa16.35■□□□□ 0.21
PGBD1-201ENST00000259883 ZNF428Q96B54 188 aa16.34■□□□□ 0.21
PGBD1-201ENST00000259883 COG3Q96JB2 828 aa16.34■□□□□ 0.21
PGBD1-201ENST00000259883 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
PGBD1-201ENST00000259883 HSP90AA2PQ14568 343 aaPredicted RBP16.34■□□□□ 0.21
PGBD1-201ENST00000259883 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
PGBD1-201ENST00000259883 FOXO3O43524 673 aa16.33■□□□□ 0.2
PGBD1-201ENST00000259883 CALD1Q05682 793 aaKnown RBP16.33■□□□□ 0.2
PGBD1-201ENST00000259883 UBE2Q2Q8WVN8 375 aa16.33■□□□□ 0.2
PGBD1-201ENST00000259883 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
PGBD1-201ENST00000259883 SDSP20132 328 aa16.32■□□□□ 0.2
PGBD1-201ENST00000259883 ABCA9Q8IUA7 1624 aa16.32■□□□□ 0.2
PGBD1-201ENST00000259883 SLC4A2P04920 1241 aa16.32■□□□□ 0.2
PGBD1-201ENST00000259883 DDIT3P35638 169 aa16.32■□□□□ 0.2
PGBD1-201ENST00000259883 RBM10P98175 930 aaKnown RBP16.32■□□□□ 0.2
PGBD1-201ENST00000259883 API5Q9BZZ5 524 aaKnown RBP16.32■□□□□ 0.2
PGBD1-201ENST00000259883 LRRC7Q96NW7 1537 aa16.31■□□□□ 0.2
PGBD1-201ENST00000259883 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
PGBD1-201ENST00000259883 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
PGBD1-201ENST00000259883 IL13P35225 146 aa16.31■□□□□ 0.2
PGBD1-201ENST00000259883 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
PGBD1-201ENST00000259883 SLC52A1Q9NWF4 448 aa16.31■□□□□ 0.2
PGBD1-201ENST00000259883 YEATS2Q9ULM3 1422 aa16.31■□□□□ 0.2
PGBD1-201ENST00000259883 IFT172Q9UG01 1749 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 PPLO60437 1756 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 SETBP1Q9Y6X0 1596 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 ABCC3O15438 1527 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 POGZQ7Z3K3 1410 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 TRIM6-TRIM34B2RNG4 842 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
PGBD1-201ENST00000259883 G2E3Q7L622 706 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.3■□□□□ 0.2
PGBD1-201ENST00000259883 GDPD2Q9HCC8 539 aa16.3■□□□□ 0.2
PGBD1-201ENST00000259883 MYO3AQ8NEV4 1616 aa16.29■□□□□ 0.2
PGBD1-201ENST00000259883 COL3A1P02461 1466 aaPredicted RBP16.29■□□□□ 0.2
PGBD1-201ENST00000259883 NEK4P51957 841 aa16.29■□□□□ 0.2
PGBD1-201ENST00000259883 HSP90AB2PQ58FF8 381 aa16.29■□□□□ 0.2
PGBD1-201ENST00000259883 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
PGBD1-201ENST00000259883 NUDT16Q96DE0 195 aaKnown RBP16.29■□□□□ 0.2
PGBD1-201ENST00000259883 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
PGBD1-201ENST00000259883 ZMYM3Q14202 1370 aa16.28■□□□□ 0.2
PGBD1-201ENST00000259883 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
PGBD1-201ENST00000259883 SKOR2Q2VWA4 1001 aaPredicted RBP16.28■□□□□ 0.2
PGBD1-201ENST00000259883 CYB5RLQ6IPT4 315 aa16.28■□□□□ 0.2
PGBD1-201ENST00000259883 LTV1Q96GA3 475 aaPredicted RBP16.28■□□□□ 0.2
PGBD1-201ENST00000259883 UPF3BQ9BZI7 483 aaKnown RBP16.28■□□□□ 0.2
PGBD1-201ENST00000259883 ADGRB2O60241 1585 aa16.27■□□□□ 0.2
PGBD1-201ENST00000259883 CD163L1Q9NR16 1453 aa16.27■□□□□ 0.2
PGBD1-201ENST00000259883 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
PGBD1-201ENST00000259883 NSFL1CQ9UNZ2 370 aaKnown RBP16.27■□□□□ 0.2
PGBD1-201ENST00000259883 ABCC4O15439 1325 aa16.27■□□□□ 0.2
PGBD1-201ENST00000259883 ZC3H13Q5T200 1668 aaKnown RBP16.27■□□□□ 0.19
PGBD1-201ENST00000259883 SYCE3A1L190 88 aa16.27■□□□□ 0.19
PGBD1-201ENST00000259883 KIAA1211Q6ZU35 1233 aa16.27■□□□□ 0.19
PGBD1-201ENST00000259883 USP26Q9BXU7 913 aa16.27■□□□□ 0.19
PGBD1-201ENST00000259883 FRMPD1Q5SYB0 1578 aa16.27■□□□□ 0.19
PGBD1-201ENST00000259883 MSH6P52701 1360 aa16.26■□□□□ 0.19
PGBD1-201ENST00000259883 ARHGEF28Q8N1W1 1705 aaKnown RBP16.26■□□□□ 0.19
PGBD1-201ENST00000259883 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
PGBD1-201ENST00000259883 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
PGBD1-201ENST00000259883 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
PGBD1-201ENST00000259883 XPCQ01831 940 aaPredicted RBP16.26■□□□□ 0.19
PGBD1-201ENST00000259883 RABEP1Q15276 862 aa16.26■□□□□ 0.19
PGBD1-201ENST00000259883 CEP85Q6P2H3 762 aa16.26■□□□□ 0.19
PGBD1-201ENST00000259883 ZSCAN23Q3MJ62 389 aa16.25■□□□□ 0.19
PGBD1-201ENST00000259883 DCTPP1Q9H773 170 aa16.25■□□□□ 0.19
PGBD1-201ENST00000259883 ANO2Q9NQ90 1003 aa16.25■□□□□ 0.19
PGBD1-201ENST00000259883 NEXMIFQ5QGS0 1516 aa16.25■□□□□ 0.19
PGBD1-201ENST00000259883 RBSNQ9H1K0 784 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms