RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-201ENST00000258947 KRT28Q7Z3Y7 464 aa11.12□□□□□ -0.63
CALCOCO2-201ENST00000258947 C19orf44Q9H6X5 657 aa11.12□□□□□ -0.63
CALCOCO2-201ENST00000258947 PTCH1Q13635 1447 aa11.12□□□□□ -0.63
CALCOCO2-201ENST00000258947 IPO8O15397 1037 aaKnown RBP11.12□□□□□ -0.63
CALCOCO2-201ENST00000258947 MIS18AQ9NYP9 233 aa11.12□□□□□ -0.63
CALCOCO2-201ENST00000258947 MS4A1P11836 297 aa11.12□□□□□ -0.63
CALCOCO2-201ENST00000258947 SSH1Q8WYL5 1049 aa11.12□□□□□ -0.63
CALCOCO2-201ENST00000258947 DZIP1LQ8IYY4 767 aaKnown RBP11.11□□□□□ -0.63
CALCOCO2-201ENST00000258947 TNNQ9UQP3 1299 aa11.11□□□□□ -0.63
CALCOCO2-201ENST00000258947 CDC42BPGQ6DT37 1551 aa11.11□□□□□ -0.63
CALCOCO2-201ENST00000258947 MED14O60244 1454 aa11.1□□□□□ -0.63
CALCOCO2-201ENST00000258947 FLT4P35916 1363 aa11.1□□□□□ -0.63
CALCOCO2-201ENST00000258947 AATKQ6ZMQ8 1374 aa11.1□□□□□ -0.63
CALCOCO2-201ENST00000258947 TRMT2AQ8IZ69 625 aaKnown RBP11.1□□□□□ -0.63
CALCOCO2-201ENST00000258947 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
CALCOCO2-201ENST00000258947 NOB1Q9ULX3 412 aaKnown RBP11.1□□□□□ -0.63
CALCOCO2-201ENST00000258947 TWISTNBQ3B726 338 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO2-201ENST00000258947 EYA1Q99502 592 aa11.1□□□□□ -0.63
CALCOCO2-201ENST00000258947 TSPYL4Q9UJ04 414 aa11.1□□□□□ -0.63
CALCOCO2-201ENST00000258947 PDE3AQ14432 1141 aa11.09□□□□□ -0.63
CALCOCO2-201ENST00000258947 HOXC9P31274 260 aa11.09□□□□□ -0.63
CALCOCO2-201ENST00000258947 ANP32AP39687 249 aaKnown RBP11.09□□□□□ -0.63
CALCOCO2-201ENST00000258947 KCNH5Q8NCM2 988 aa11.09□□□□□ -0.63
CALCOCO2-201ENST00000258947 PNPLA6Q8IY17 1366 aa11.09□□□□□ -0.63
CALCOCO2-201ENST00000258947 DIP2AQ14689 1571 aa11.09□□□□□ -0.63
CALCOCO2-201ENST00000258947 MBIPQ9NS73 344 aa11.08□□□□□ -0.63
CALCOCO2-201ENST00000258947 NLRP2Q9NX02 1062 aa11.08□□□□□ -0.63
CALCOCO2-201ENST00000258947 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.08□□□□□ -0.64
CALCOCO2-201ENST00000258947 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
CALCOCO2-201ENST00000258947 USP32Q8NFA0 1604 aa11.08□□□□□ -0.64
CALCOCO2-201ENST00000258947 CENPQQ7L2Z9 268 aaPredicted RBP11.08□□□□□ -0.64
CALCOCO2-201ENST00000258947 GAS2L2Q8NHY3 880 aa11.08□□□□□ -0.64
CALCOCO2-201ENST00000258947 CADPS2Q86UW7 1296 aa11.08□□□□□ -0.64
CALCOCO2-201ENST00000258947 CABLES1Q8TDN4 633 aa11.08□□□□□ -0.64
CALCOCO2-201ENST00000258947 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
CALCOCO2-201ENST00000258947 LRRC59Q96AG4 307 aaKnown RBP11.07□□□□□ -0.64
CALCOCO2-201ENST00000258947 KIF16BQ96L93 1317 aa11.07□□□□□ -0.64
CALCOCO2-201ENST00000258947 SETD1AO15047 1707 aaKnown RBP11.07□□□□□ -0.64
CALCOCO2-201ENST00000258947 SBNO1A3KN83 1393 aa11.07□□□□□ -0.64
CALCOCO2-201ENST00000258947 GCP02774 474 aa11.07□□□□□ -0.64
CALCOCO2-201ENST00000258947 MTHFSDQ2M296 383 aaKnown RBP11.07□□□□□ -0.64
CALCOCO2-201ENST00000258947 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
CALCOCO2-201ENST00000258947 IFT57Q9NWB7 429 aa11.07□□□□□ -0.64
CALCOCO2-201ENST00000258947 RLBP1P12271 317 aa11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 ATF7IPQ6VMQ6 1270 aa11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 IL16Q14005 1332 aa11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 ADGRL3Q9HAR2 1447 aa11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 MSH6P52701 1360 aa11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 CT47B1P0C2W7 299 aaPredicted RBP11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 KRT24Q2M2I5 525 aa11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 SLC4A10Q6U841 1118 aa11.06□□□□□ -0.64
CALCOCO2-201ENST00000258947 ANKARQ7Z5J8 1434 aa11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 TRIM27P14373 513 aa11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 PHF23Q9BUL5 403 aaPredicted RBP11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 TEFQ10587 303 aa11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 CHRNA2Q15822 529 aa11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 STK31Q9BXU1 1019 aa11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 RWDD1Q9H446 243 aaPredicted RBP11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 DAXXQ9UER7 740 aaPredicted RBP11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
CALCOCO2-201ENST00000258947 C8orf58Q8NAV2 365 aa11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 DDX19BQ9UMR2 479 aa11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 ITSN1Q15811 1721 aa11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 GNAT3A8MTJ3 354 aa11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 OVOS2A0A0J9YW53 1432 aa11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 OVOS2Q6IE36 1432 aa11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 MVPQ14764 893 aaKnown RBP11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 TMEM57Q8N5G2 664 aa11.04□□□□□ -0.64
CALCOCO2-201ENST00000258947 COL3A1P02461 1466 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO2-201ENST00000258947 A0A0G2JS52 829 aa11.03□□□□□ -0.64
CALCOCO2-201ENST00000258947 EIF2S2P20042 333 aaKnown RBP11.03□□□□□ -0.64
CALCOCO2-201ENST00000258947 KNDC1Q76NI1 1749 aa11.03□□□□□ -0.64
CALCOCO2-201ENST00000258947 RAPGEF4Q8WZA2 1011 aa11.03□□□□□ -0.64
CALCOCO2-201ENST00000258947 ANKRD24Q8TF21 1146 aa11.03□□□□□ -0.64
CALCOCO2-201ENST00000258947 IP6K1Q92551 441 aa11.03□□□□□ -0.64
CALCOCO2-201ENST00000258947 C1orf115Q9H7X2 142 aa11.03□□□□□ -0.64
CALCOCO2-201ENST00000258947 SHPRHQ149N8 1683 aa11.02□□□□□ -0.64
CALCOCO2-201ENST00000258947 IQSEC2Q5JU85 1478 aa11.02□□□□□ -0.65
CALCOCO2-201ENST00000258947 NPHP3Q7Z494 1330 aa11.02□□□□□ -0.65
CALCOCO2-201ENST00000258947 ZNF335Q9H4Z2 1342 aaPredicted RBP11.02□□□□□ -0.65
CALCOCO2-201ENST00000258947 APBB1O00213 710 aa11.02□□□□□ -0.65
CALCOCO2-201ENST00000258947 NBPF6Q5VWK0 638 aa11.02□□□□□ -0.65
CALCOCO2-201ENST00000258947 NBPF4Q96M43 638 aa11.02□□□□□ -0.65
CALCOCO2-201ENST00000258947 USP35Q9P2H5 1018 aa11.02□□□□□ -0.65
CALCOCO2-201ENST00000258947 VAMP4O75379 141 aa11.01□□□□□ -0.65
CALCOCO2-201ENST00000258947 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
CALCOCO2-201ENST00000258947 PDE4AP27815 886 aa11.01□□□□□ -0.65
CALCOCO2-201ENST00000258947 PLEKHO1Q53GL0 409 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO2-201ENST00000258947 MPRIPQ6WCQ1 1025 aa11.01□□□□□ -0.65
CALCOCO2-201ENST00000258947 PRDM11Q9NQV5 511 aa11.01□□□□□ -0.65
CALCOCO2-201ENST00000258947 USP31Q70CQ4 1352 aa11.01□□□□□ -0.65
CALCOCO2-201ENST00000258947 IGHDP01880 384 aa11□□□□□ -0.65
CALCOCO2-201ENST00000258947 ADAMTSL3P82987 1691 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms