RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 SKOR2Q2VWA4 1001 aaPredicted RBP16.68■□□□□ 0.26
H3F3B-201ENST00000254810 TERF2IPQ9NYB0 399 aa16.68■□□□□ 0.26
H3F3B-201ENST00000254810 BAG4O95429 457 aaKnown RBP16.67■□□□□ 0.26
H3F3B-201ENST00000254810 CABP1Q9NZU7 370 aa16.67■□□□□ 0.26
H3F3B-201ENST00000254810 KNDC1Q76NI1 1749 aa16.67■□□□□ 0.26
H3F3B-201ENST00000254810 PKP1Q13835 747 aa16.67■□□□□ 0.26
H3F3B-201ENST00000254810 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
H3F3B-201ENST00000254810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.26
H3F3B-201ENST00000254810 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
H3F3B-201ENST00000254810 POLKQ9UBT6 870 aa16.67■□□□□ 0.26
H3F3B-201ENST00000254810 ABCC4O15439 1325 aa16.66■□□□□ 0.26
H3F3B-201ENST00000254810 MBIPQ9NS73 344 aa16.66■□□□□ 0.26
H3F3B-201ENST00000254810 CDC42BPGQ6DT37 1551 aa16.65■□□□□ 0.26
H3F3B-201ENST00000254810 MYO5BQ9ULV0 1848 aa16.65■□□□□ 0.26
H3F3B-201ENST00000254810 PLEKHM2Q8IWE5 1019 aa16.65■□□□□ 0.26
H3F3B-201ENST00000254810 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
H3F3B-201ENST00000254810 OTUD7AQ8TE49 926 aaPredicted RBP16.65■□□□□ 0.26
H3F3B-201ENST00000254810 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
H3F3B-201ENST00000254810 CDC45O75419 566 aa16.64■□□□□ 0.25
H3F3B-201ENST00000254810 NASPP49321 788 aaPredicted RBP16.64■□□□□ 0.25
H3F3B-201ENST00000254810 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
H3F3B-201ENST00000254810 CLEC17AQ6ZS10 378 aa16.64■□□□□ 0.25
H3F3B-201ENST00000254810 ARHGAP45Q92619 1136 aa16.64■□□□□ 0.25
H3F3B-201ENST00000254810 CDK19Q9BWU1 502 aa16.64■□□□□ 0.25
H3F3B-201ENST00000254810 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
H3F3B-201ENST00000254810 CHAMP1Q96JM3 812 aa16.63■□□□□ 0.25
H3F3B-201ENST00000254810 PPP1R9BQ96SB3 815 aa16.63■□□□□ 0.25
H3F3B-201ENST00000254810 RRP9O43818 475 aaKnown RBP16.63■□□□□ 0.25
H3F3B-201ENST00000254810 KLHL40Q2TBA0 621 aa16.63■□□□□ 0.25
H3F3B-201ENST00000254810 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
H3F3B-201ENST00000254810 ZNF853P0CG23 659 aa16.62■□□□□ 0.25
H3F3B-201ENST00000254810 YTHDC2Q9H6S0 1430 aaKnown RBP16.62■□□□□ 0.25
H3F3B-201ENST00000254810 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
H3F3B-201ENST00000254810 CLTCQ00610 1675 aaKnown RBP16.62■□□□□ 0.25
H3F3B-201ENST00000254810 FAM83GA6ND36 823 aa16.62■□□□□ 0.25
H3F3B-201ENST00000254810 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
H3F3B-201ENST00000254810 MCTP1Q6DN14 999 aa16.62■□□□□ 0.25
H3F3B-201ENST00000254810 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
H3F3B-201ENST00000254810 CCDC173Q0VFZ6 552 aa16.61■□□□□ 0.25
H3F3B-201ENST00000254810 TWISTNBQ3B726 338 aaPredicted RBP16.61■□□□□ 0.25
H3F3B-201ENST00000254810 HDGFL2Q7Z4V5 671 aaPredicted RBP16.61■□□□□ 0.25
H3F3B-201ENST00000254810 ZNF428Q96B54 188 aa16.61■□□□□ 0.25
H3F3B-201ENST00000254810 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
H3F3B-201ENST00000254810 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
H3F3B-201ENST00000254810 CYP2E1P05181 493 aaPredicted RBP16.6■□□□□ 0.25
H3F3B-201ENST00000254810 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
H3F3B-201ENST00000254810 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
H3F3B-201ENST00000254810 USP26Q9BXU7 913 aa16.6■□□□□ 0.25
H3F3B-201ENST00000254810 LMBRD1Q9NUN5 540 aa16.6■□□□□ 0.25
H3F3B-201ENST00000254810 IFT57Q9NWB7 429 aa16.6■□□□□ 0.25
H3F3B-201ENST00000254810 TTC22Q5TAA0 569 aa16.59■□□□□ 0.25
H3F3B-201ENST00000254810 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
H3F3B-201ENST00000254810 ZGPATQ8N5A5 531 aaKnown RBP16.59■□□□□ 0.25
H3F3B-201ENST00000254810 PTMSP20962 102 aa16.59■□□□□ 0.25
H3F3B-201ENST00000254810 ARHGAP31Q2M1Z3 1444 aa16.58■□□□□ 0.25
H3F3B-201ENST00000254810 GNAI1P63096 354 aa16.58■□□□□ 0.25
H3F3B-201ENST00000254810 KIAA1211Q6ZU35 1233 aa16.58■□□□□ 0.25
H3F3B-201ENST00000254810 DCTPP1Q9H773 170 aa16.58■□□□□ 0.25
H3F3B-201ENST00000254810 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.24
H3F3B-201ENST00000254810 IBTKQ9P2D0 1353 aaPredicted RBP16.58■□□□□ 0.24
H3F3B-201ENST00000254810 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.24
H3F3B-201ENST00000254810 NCLP19338 710 aaKnown RBP16.58■□□□□ 0.24
H3F3B-201ENST00000254810 IL13P35225 146 aa16.58■□□□□ 0.24
H3F3B-201ENST00000254810 KRT24Q2M2I5 525 aa16.58■□□□□ 0.24
H3F3B-201ENST00000254810 ZSCAN23Q3MJ62 389 aa16.58■□□□□ 0.24
H3F3B-201ENST00000254810 RBSNQ9H1K0 784 aa16.58■□□□□ 0.24
H3F3B-201ENST00000254810 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
H3F3B-201ENST00000254810 RABEP1Q15276 862 aa16.57■□□□□ 0.24
H3F3B-201ENST00000254810 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
H3F3B-201ENST00000254810 ZDHHC9Q9Y397 364 aa16.57■□□□□ 0.24
H3F3B-201ENST00000254810 GOLGA6L22H0YM25 854 aa16.57■□□□□ 0.24
H3F3B-201ENST00000254810 APBB1O00213 710 aa16.56■□□□□ 0.24
H3F3B-201ENST00000254810 ZNF445P59923 1031 aa16.56■□□□□ 0.24
H3F3B-201ENST00000254810 WAPLQ7Z5K2 1190 aa16.56■□□□□ 0.24
H3F3B-201ENST00000254810 ATP10DQ9P241 1426 aa16.56■□□□□ 0.24
H3F3B-201ENST00000254810 DLG5Q8TDM6 1919 aa16.56■□□□□ 0.24
H3F3B-201ENST00000254810 GPT2Q8TD30 523 aa16.56■□□□□ 0.24
H3F3B-201ENST00000254810 ZMYND15Q9H091 742 aa16.56■□□□□ 0.24
H3F3B-201ENST00000254810 TMEM131LA2VDJ0 1609 aa16.55■□□□□ 0.24
H3F3B-201ENST00000254810 YEATS2Q9ULM3 1422 aa16.55■□□□□ 0.24
H3F3B-201ENST00000254810 SDSP20132 328 aa16.55■□□□□ 0.24
H3F3B-201ENST00000254810 PRIM1P49642 420 aaKnown RBP16.55■□□□□ 0.24
H3F3B-201ENST00000254810 NME9Q86XW9 330 aa16.55■□□□□ 0.24
H3F3B-201ENST00000254810 CHMP4BQ9H444 224 aaKnown RBP16.55■□□□□ 0.24
H3F3B-201ENST00000254810 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.55■□□□□ 0.24
H3F3B-201ENST00000254810 REREQ9P2R6 1566 aa16.55■□□□□ 0.24
H3F3B-201ENST00000254810 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
H3F3B-201ENST00000254810 NSFL1CQ9UNZ2 370 aaKnown RBP16.54■□□□□ 0.24
H3F3B-201ENST00000254810 RGS12O14924 1447 aa16.54■□□□□ 0.24
H3F3B-201ENST00000254810 API5Q9BZZ5 524 aaKnown RBP16.54■□□□□ 0.24
H3F3B-201ENST00000254810 PRPF40AO75400 957 aaKnown RBP16.53■□□□□ 0.24
H3F3B-201ENST00000254810 TPM2P07951 284 aa16.53■□□□□ 0.24
H3F3B-201ENST00000254810 GLIPR1L2Q4G1C9 344 aa16.53■□□□□ 0.24
H3F3B-201ENST00000254810 FBXO31Q5XUX0 539 aaPredicted RBP16.53■□□□□ 0.24
H3F3B-201ENST00000254810 DIP2CQ9Y2E4 1556 aa16.53■□□□□ 0.24
H3F3B-201ENST00000254810 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
H3F3B-201ENST00000254810 ALKQ9UM73 1620 aa16.53■□□□□ 0.24
H3F3B-201ENST00000254810 OFD1O75665 1012 aa16.53■□□□□ 0.24
H3F3B-201ENST00000254810 RRS1Q15050 365 aaKnown RBP16.53■□□□□ 0.24
H3F3B-201ENST00000254810 NUCB2P80303 420 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms