RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NRKQ7Z2Y5 1582 aa21.72■■□□□ 1.07
FOXA1-201ENST00000250448 DIAPH1O60610 1272 aaKnown RBP21.71■■□□□ 1.07
FOXA1-201ENST00000250448 FRAT2O75474 233 aaPredicted RBP21.7■■□□□ 1.06
FOXA1-201ENST00000250448 TCP11L2Q8N4U5 519 aa21.7■■□□□ 1.06
FOXA1-201ENST00000250448 PHF8Q9UPP1 1060 aa21.7■■□□□ 1.06
FOXA1-201ENST00000250448 ORAI2Q96SN7 254 aa21.7■■□□□ 1.06
FOXA1-201ENST00000250448 MAPK8IP3Q9UPT6 1336 aa21.69■■□□□ 1.06
FOXA1-201ENST00000250448 RUNDC1Q96C34 613 aa21.69■■□□□ 1.06
FOXA1-201ENST00000250448 ANKARQ7Z5J8 1434 aa21.69■■□□□ 1.06
FOXA1-201ENST00000250448 USP19O94966 1318 aa21.69■■□□□ 1.06
FOXA1-201ENST00000250448 XPCQ01831 940 aaPredicted RBP21.69■■□□□ 1.06
FOXA1-201ENST00000250448 CLUAP1Q96AJ1 413 aa21.69■■□□□ 1.06
FOXA1-201ENST00000250448 LMTK3Q96Q04 1460 aa21.69■■□□□ 1.06
FOXA1-201ENST00000250448 SSH2Q76I76 1423 aa21.68■■□□□ 1.06
FOXA1-201ENST00000250448 CANXP27824 592 aaKnown RBP21.68■■□□□ 1.06
FOXA1-201ENST00000250448 PNPLA6Q8IY17 1366 aa21.67■■□□□ 1.06
FOXA1-201ENST00000250448 HMOX1P09601 288 aa21.66■■□□□ 1.06
FOXA1-201ENST00000250448 WWC1Q8IX03 1113 aa21.66■■□□□ 1.06
FOXA1-201ENST00000250448 STRCP1A6NGW2 1772 aa21.66■■□□□ 1.06
FOXA1-201ENST00000250448 NWD1Q149M9 1564 aa21.66■■□□□ 1.06
FOXA1-201ENST00000250448 PANK1Q8TE04 598 aa21.66■■□□□ 1.06
FOXA1-201ENST00000250448 COG6Q9Y2V7 657 aa21.66■■□□□ 1.06
FOXA1-201ENST00000250448 OVOS2A0A0J9YW53 1432 aa21.65■■□□□ 1.06
FOXA1-201ENST00000250448 OVOS2Q6IE36 1432 aa21.65■■□□□ 1.06
FOXA1-201ENST00000250448 NLRP6P59044 892 aa21.65■■□□□ 1.06
FOXA1-201ENST00000250448 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.65■■□□□ 1.06
FOXA1-201ENST00000250448 TMEM94Q12767 1356 aa21.64■■□□□ 1.05
FOXA1-201ENST00000250448 FOXO3O43524 673 aa21.64■■□□□ 1.05
FOXA1-201ENST00000250448 ABTB2Q8N961 1025 aa21.63■■□□□ 1.05
FOXA1-201ENST00000250448 TTC21AQ8NDW8 1320 aa21.62■■□□□ 1.05
FOXA1-201ENST00000250448 AATKQ6ZMQ8 1374 aa21.62■■□□□ 1.05
FOXA1-201ENST00000250448 IQSEC2Q5JU85 1478 aa21.62■■□□□ 1.05
FOXA1-201ENST00000250448 PSME1Q06323 249 aa21.61■■□□□ 1.05
FOXA1-201ENST00000250448 PLEKHF1Q96S99 279 aa21.61■■□□□ 1.05
FOXA1-201ENST00000250448 PIK3C2AO00443 1686 aa21.61■■□□□ 1.05
FOXA1-201ENST00000250448 SEC24BO95487 1268 aa21.6■■□□□ 1.05
FOXA1-201ENST00000250448 IL13P35225 146 aa21.6■■□□□ 1.05
FOXA1-201ENST00000250448 HSP90AB2PQ58FF8 381 aa21.6■■□□□ 1.05
FOXA1-201ENST00000250448 C19orf44Q9H6X5 657 aa21.6■■□□□ 1.05
FOXA1-201ENST00000250448 BECN1Q14457 450 aa21.59■■□□□ 1.05
FOXA1-201ENST00000250448 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
FOXA1-201ENST00000250448 PRKAR2BP31323 418 aa21.59■■□□□ 1.05
FOXA1-201ENST00000250448 CDK12Q9NYV4 1490 aaPredicted RBP21.58■■□□□ 1.05
FOXA1-201ENST00000250448 MAP3K19Q56UN5 1328 aa21.58■■□□□ 1.05
FOXA1-201ENST00000250448 DDX17Q92841 729 aaKnown RBP21.58■■□□□ 1.05
FOXA1-201ENST00000250448 RARSP54136 660 aaKnown RBP21.57■■□□□ 1.04
FOXA1-201ENST00000250448 AAMPQ13685 434 aa21.57■■□□□ 1.04
FOXA1-201ENST00000250448 LMOD2Q6P5Q4 547 aa21.57■■□□□ 1.04
FOXA1-201ENST00000250448 ZNF335Q9H4Z2 1342 aaPredicted RBP21.57■■□□□ 1.04
FOXA1-201ENST00000250448 USP31Q70CQ4 1352 aa21.56■■□□□ 1.04
FOXA1-201ENST00000250448 ATF3P18847 181 aa21.56■■□□□ 1.04
FOXA1-201ENST00000250448 EIF4A2Q14240 407 aaKnown RBP21.56■■□□□ 1.04
FOXA1-201ENST00000250448 PHACTR3Q96KR7 559 aa21.56■■□□□ 1.04
FOXA1-201ENST00000250448 RSPH6AQ9H0K4 717 aa21.56■■□□□ 1.04
FOXA1-201ENST00000250448 PEAK1Q9H792 1746 aa21.55■■□□□ 1.04
FOXA1-201ENST00000250448 TMPOP42166 694 aaKnown RBP21.55■■□□□ 1.04
FOXA1-201ENST00000250448 LRRC7Q96NW7 1537 aa21.55■■□□□ 1.04
FOXA1-201ENST00000250448 AEBP1Q8IUX7 1158 aa21.54■■□□□ 1.04
FOXA1-201ENST00000250448 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
FOXA1-201ENST00000250448 ZBTB7CA1YPR0 619 aa21.53■■□□□ 1.04
FOXA1-201ENST00000250448 C1orf167Q5SNV9 1468 aa21.53■■□□□ 1.04
FOXA1-201ENST00000250448 FCHSD2O94868 740 aa21.52■■□□□ 1.04
FOXA1-201ENST00000250448 AMPHP49418 695 aa21.52■■□□□ 1.04
FOXA1-201ENST00000250448 WDR63Q8IWG1 891 aa21.52■■□□□ 1.04
FOXA1-201ENST00000250448 PCDHB15Q9Y5E8 787 aa21.52■■□□□ 1.04
FOXA1-201ENST00000250448 RLBP1P12271 317 aa21.52■■□□□ 1.04
FOXA1-201ENST00000250448 RIPK4P57078 832 aa21.52■■□□□ 1.04
FOXA1-201ENST00000250448 TNNQ9UQP3 1299 aa21.51■■□□□ 1.03
FOXA1-201ENST00000250448 TRIM35Q9UPQ4 493 aa21.5■■□□□ 1.03
FOXA1-201ENST00000250448 SLKQ9H2G2 1235 aaPredicted RBP21.5■■□□□ 1.03
FOXA1-201ENST00000250448 UPF2Q9HAU5 1272 aaKnown RBP21.5■■□□□ 1.03
FOXA1-201ENST00000250448 MARF1Q9Y4F3 1742 aaKnown RBP21.5■■□□□ 1.03
FOXA1-201ENST00000250448 SULT6B1Q6IMI4 303 aa21.5■■□□□ 1.03
FOXA1-201ENST00000250448 PDZRN3Q9UPQ7 1066 aa21.5■■□□□ 1.03
FOXA1-201ENST00000250448 LTV1Q96GA3 475 aaPredicted RBP21.49■■□□□ 1.03
FOXA1-201ENST00000250448 KRT28Q7Z3Y7 464 aa21.49■■□□□ 1.03
FOXA1-201ENST00000250448 TBC1D32Q96NH3 1257 aa21.48■■□□□ 1.03
FOXA1-201ENST00000250448 MST1RQ04912 1400 aa21.48■■□□□ 1.03
FOXA1-201ENST00000250448 CCDC27Q2M243 656 aa21.48■■□□□ 1.03
FOXA1-201ENST00000250448 BCL2L13Q9BXK5 485 aa21.48■■□□□ 1.03
FOXA1-201ENST00000250448 THUMPD2Q9BTF0 503 aaKnown RBP21.47■■□□□ 1.03
FOXA1-201ENST00000250448 TSR2Q969E8 191 aaKnown RBP21.46■■□□□ 1.03
FOXA1-201ENST00000250448 ANTXR1Q9H6X2 564 aa21.46■■□□□ 1.03
FOXA1-201ENST00000250448 RWDD1Q9H446 243 aaPredicted RBP21.46■■□□□ 1.03
FOXA1-201ENST00000250448 SBNO1A3KN83 1393 aa21.45■■□□□ 1.02
FOXA1-201ENST00000250448 FLT4P35916 1363 aa21.45■■□□□ 1.02
FOXA1-201ENST00000250448 MSH6P52701 1360 aa21.45■■□□□ 1.02
FOXA1-201ENST00000250448 PNNQ9H307 717 aaKnown RBP21.45■■□□□ 1.02
FOXA1-201ENST00000250448 MYH16Q9H6N6 1097 aa21.44■■□□□ 1.02
FOXA1-201ENST00000250448 HOXC9P31274 260 aa21.44■■□□□ 1.02
FOXA1-201ENST00000250448 CADPS2Q86UW7 1296 aa21.44■■□□□ 1.02
FOXA1-201ENST00000250448 FAM43AQ8N2R8 423 aa21.44■■□□□ 1.02
FOXA1-201ENST00000250448 XIRP1Q702N8 1843 aaKnown RBP21.44■■□□□ 1.02
FOXA1-201ENST00000250448 TBC1D2Q9BYX2 928 aa21.42■■□□□ 1.02
FOXA1-201ENST00000250448 NCBP3Q53F19 620 aaKnown RBP21.42■■□□□ 1.02
FOXA1-201ENST00000250448 MVPQ14764 893 aaKnown RBP21.42■■□□□ 1.02
FOXA1-201ENST00000250448 NFE2L2Q16236 605 aa21.42■■□□□ 1.02
FOXA1-201ENST00000250448 FAM83GA6ND36 823 aa21.41■■□□□ 1.02
FOXA1-201ENST00000250448 EYA1Q99502 592 aa21.41■■□□□ 1.02
FOXA1-201ENST00000250448 DCTN1Q14203 1278 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms