RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 DZIP1LQ8IYY4 767 aaKnown RBP19.37■□□□□ 0.69
DDX49-201ENST00000247003 NPM2Q86SE8 214 aaKnown RBP19.37■□□□□ 0.69
DDX49-201ENST00000247003 SKAP1Q86WV1 359 aa19.37■□□□□ 0.69
DDX49-201ENST00000247003 MVPQ14764 893 aaKnown RBP19.36■□□□□ 0.69
DDX49-201ENST00000247003 ANKARQ7Z5J8 1434 aa19.35■□□□□ 0.69
DDX49-201ENST00000247003 RLBP1P12271 317 aa19.35■□□□□ 0.69
DDX49-201ENST00000247003 ZNF428Q96B54 188 aa19.35■□□□□ 0.69
DDX49-201ENST00000247003 ZNF142P52746 1687 aaPredicted RBP19.35■□□□□ 0.69
DDX49-201ENST00000247003 RGS3P49796 1198 aa19.35■□□□□ 0.69
DDX49-201ENST00000247003 GNAI1P63096 354 aa19.35■□□□□ 0.69
DDX49-201ENST00000247003 NGDNQ8NEJ9 315 aaKnown RBP19.35■□□□□ 0.69
DDX49-201ENST00000247003 PHACTR3Q96KR7 559 aa19.35■□□□□ 0.69
DDX49-201ENST00000247003 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
DDX49-201ENST00000247003 IPO8O15397 1037 aaKnown RBP19.34■□□□□ 0.69
DDX49-201ENST00000247003 FAM161AQ3B820 660 aa19.34■□□□□ 0.69
DDX49-201ENST00000247003 ALDH1L2Q3SY69 923 aa19.34■□□□□ 0.69
DDX49-201ENST00000247003 SSH1Q8WYL5 1049 aa19.34■□□□□ 0.69
DDX49-201ENST00000247003 ZBTB47Q9UFB7 747 aaPredicted RBP19.34■□□□□ 0.69
DDX49-201ENST00000247003 IGHDP01880 384 aa19.33■□□□□ 0.69
DDX49-201ENST00000247003 IFT57Q9NWB7 429 aa19.33■□□□□ 0.69
DDX49-201ENST00000247003 USP31Q70CQ4 1352 aa19.33■□□□□ 0.69
DDX49-201ENST00000247003 DLG5Q8TDM6 1919 aa19.33■□□□□ 0.68
DDX49-201ENST00000247003 SSH2Q76I76 1423 aa19.33■□□□□ 0.68
DDX49-201ENST00000247003 RGPD8O14715 1765 aaPredicted RBP19.33■□□□□ 0.68
DDX49-201ENST00000247003 ATF7IPQ6VMQ6 1270 aa19.32■□□□□ 0.68
DDX49-201ENST00000247003 TNNQ9UQP3 1299 aa19.32■□□□□ 0.68
DDX49-201ENST00000247003 FMN2Q9NZ56 1722 aa19.32■□□□□ 0.68
DDX49-201ENST00000247003 DDX19BQ9UMR2 479 aa19.32■□□□□ 0.68
DDX49-201ENST00000247003 RWDD1Q9H446 243 aaPredicted RBP19.31■□□□□ 0.68
DDX49-201ENST00000247003 EIF4A2Q14240 407 aaKnown RBP19.3■□□□□ 0.68
DDX49-201ENST00000247003 PEAK1Q9H792 1746 aa19.3■□□□□ 0.68
DDX49-201ENST00000247003 TRIM27P14373 513 aa19.3■□□□□ 0.68
DDX49-201ENST00000247003 ANKLE2Q86XL3 938 aa19.29■□□□□ 0.68
DDX49-201ENST00000247003 ITPRIPQ8IWB1 547 aa19.29■□□□□ 0.68
DDX49-201ENST00000247003 NOB1Q9ULX3 412 aaKnown RBP19.29■□□□□ 0.68
DDX49-201ENST00000247003 VIRMAQ69YN4 1812 aaKnown RBP19.28■□□□□ 0.68
DDX49-201ENST00000247003 KCNA6P17658 529 aa19.28■□□□□ 0.68
DDX49-201ENST00000247003 DDRGK1Q96HY6 314 aa19.28■□□□□ 0.68
DDX49-201ENST00000247003 RGPD1P0DJD0 1748 aa19.28■□□□□ 0.68
DDX49-201ENST00000247003 SULT6B1Q6IMI4 303 aa19.28■□□□□ 0.68
DDX49-201ENST00000247003 PIK3C2AO00443 1686 aa19.27■□□□□ 0.68
DDX49-201ENST00000247003 FLT4P35916 1363 aa19.27■□□□□ 0.67
DDX49-201ENST00000247003 SOX12O15370 315 aa19.26■□□□□ 0.67
DDX49-201ENST00000247003 CFAP44Q96MT7 982 aa19.26■□□□□ 0.67
DDX49-201ENST00000247003 THUMPD2Q9BTF0 503 aaKnown RBP19.26■□□□□ 0.67
DDX49-201ENST00000247003 PCDHB15Q9Y5E8 787 aa19.26■□□□□ 0.67
DDX49-201ENST00000247003 CHD2O14647 1828 aaKnown RBP19.26■□□□□ 0.67
DDX49-201ENST00000247003 SBNO1A3KN83 1393 aa19.26■□□□□ 0.67
DDX49-201ENST00000247003 ARHGEF10O15013 1369 aa19.25■□□□□ 0.67
DDX49-201ENST00000247003 BRPF1P55201 1214 aaPredicted RBP19.25■□□□□ 0.67
DDX49-201ENST00000247003 C8orf34Q49A92 452 aa19.25■□□□□ 0.67
DDX49-201ENST00000247003 ZNF853P0CG23 659 aa19.24■□□□□ 0.67
DDX49-201ENST00000247003 CHMP4BQ9H444 224 aaKnown RBP19.24■□□□□ 0.67
DDX49-201ENST00000247003 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
DDX49-201ENST00000247003 HAP1P54257 671 aaPredicted RBP19.23■□□□□ 0.67
DDX49-201ENST00000247003 HSP90AB2PQ58FF8 381 aa19.23■□□□□ 0.67
DDX49-201ENST00000247003 USP54Q70EL1 1684 aa19.23■□□□□ 0.67
DDX49-201ENST00000247003 MAP3K19Q56UN5 1328 aa19.23■□□□□ 0.67
DDX49-201ENST00000247003 AMPHP49418 695 aa19.22■□□□□ 0.67
DDX49-201ENST00000247003 AEBP1Q8IUX7 1158 aa19.22■□□□□ 0.67
DDX49-201ENST00000247003 TMEM57Q8N5G2 664 aa19.22■□□□□ 0.67
DDX49-201ENST00000247003 TWISTNBQ3B726 338 aaPredicted RBP19.21■□□□□ 0.67
DDX49-201ENST00000247003 KDM4FA0A1W2PPD8 638 aa19.21■□□□□ 0.67
DDX49-201ENST00000247003 VAMP4O75379 141 aa19.21■□□□□ 0.67
DDX49-201ENST00000247003 PAK3O75914 559 aaPredicted RBP19.21■□□□□ 0.67
DDX49-201ENST00000247003 NLRP6P59044 892 aa19.21■□□□□ 0.67
DDX49-201ENST00000247003 ARHGAP45Q92619 1136 aa19.21■□□□□ 0.67
DDX49-201ENST00000247003 KIF24Q5T7B8 1368 aa19.2■□□□□ 0.66
DDX49-201ENST00000247003 FAM83GA6ND36 823 aa19.2■□□□□ 0.66
DDX49-201ENST00000247003 HDAC1Q13547 482 aaPredicted RBP19.18■□□□□ 0.66
DDX49-201ENST00000247003 MRPL50Q8N5N7 158 aaKnown RBP19.18■□□□□ 0.66
DDX49-201ENST00000247003 PDZRN3Q9UPQ7 1066 aa19.18■□□□□ 0.66
DDX49-201ENST00000247003 DCTN1Q14203 1278 aa19.17■□□□□ 0.66
DDX49-201ENST00000247003 TSPYL6Q8N831 410 aa19.16■□□□□ 0.66
DDX49-201ENST00000247003 ADGRL3Q9HAR2 1447 aa19.16■□□□□ 0.66
DDX49-201ENST00000247003 MARF1Q9Y4F3 1742 aaKnown RBP19.16■□□□□ 0.66
DDX49-201ENST00000247003 ELL2O00472 640 aaPredicted RBP19.16■□□□□ 0.66
DDX49-201ENST00000247003 ABTB2Q8N961 1025 aa19.16■□□□□ 0.66
DDX49-201ENST00000247003 RTF1Q92541 710 aaKnown RBP19.16■□□□□ 0.66
DDX49-201ENST00000247003 ZBTB40Q9NUA8 1239 aa19.16■□□□□ 0.66
DDX49-201ENST00000247003 DAXXQ9UER7 740 aaPredicted RBP19.16■□□□□ 0.66
DDX49-201ENST00000247003 PHF8Q9UPP1 1060 aa19.16■□□□□ 0.66
DDX49-201ENST00000247003 KDRP35968 1356 aa19.15■□□□□ 0.66
DDX49-201ENST00000247003 API5Q9BZZ5 524 aaKnown RBP19.15■□□□□ 0.66
DDX49-201ENST00000247003 NPHP4O75161 1426 aaPredicted RBP19.15■□□□□ 0.66
DDX49-201ENST00000247003 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
DDX49-201ENST00000247003 IGSF1Q8N6C5 1336 aa19.14■□□□□ 0.65
DDX49-201ENST00000247003 GAS2L2Q8NHY3 880 aa19.14■□□□□ 0.65
DDX49-201ENST00000247003 RTL1A6NKG5 1358 aa19.13■□□□□ 0.65
DDX49-201ENST00000247003 C8orf58Q8NAV2 365 aa19.13■□□□□ 0.65
DDX49-201ENST00000247003 KIAA0232Q92628 1395 aa19.12■□□□□ 0.65
DDX49-201ENST00000247003 MCM10Q7L590 875 aa19.12■□□□□ 0.65
DDX49-201ENST00000247003 ABCC4O15439 1325 aa19.12■□□□□ 0.65
DDX49-201ENST00000247003 HOXC9P31274 260 aa19.11■□□□□ 0.65
DDX49-201ENST00000247003 NUTM2GQ5VZR2 741 aa19.11■□□□□ 0.65
DDX49-201ENST00000247003 UPF2Q9HAU5 1272 aaKnown RBP19.11■□□□□ 0.65
DDX49-201ENST00000247003 CHL1O00533 1208 aa19.1■□□□□ 0.65
DDX49-201ENST00000247003 EYA1Q99502 592 aa19.1■□□□□ 0.65
DDX49-201ENST00000247003 LTN1O94822 1766 aa19.1■□□□□ 0.65
DDX49-201ENST00000247003 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms