RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 HSP90B2PQ58FF3 399 aa23.69■■□□□ 1.38
SOX4-201ENST00000244745 HDGFL1Q5TGJ6 251 aa23.69■■□□□ 1.38
SOX4-201ENST00000244745 RRS1Q15050 365 aaKnown RBP23.69■■□□□ 1.38
SOX4-201ENST00000244745 DHX16O60231 1041 aaKnown RBP23.68■■□□□ 1.38
SOX4-201ENST00000244745 FMNL2Q96PY5 1086 aa23.68■■□□□ 1.38
SOX4-201ENST00000244745 MAPKBP1O60336 1514 aa23.68■■□□□ 1.38
SOX4-201ENST00000244745 AEBP1Q8IUX7 1158 aa23.68■■□□□ 1.38
SOX4-201ENST00000244745 CCDC192P0DO97 292 aa23.67■■□□□ 1.38
SOX4-201ENST00000244745 AK7Q96M32 723 aa23.67■■□□□ 1.38
SOX4-201ENST00000244745 FYB1O15117 783 aa23.67■■□□□ 1.38
SOX4-201ENST00000244745 ABCA10Q8WWZ4 1543 aa23.67■■□□□ 1.38
SOX4-201ENST00000244745 ZSCAN30Q86W11 494 aa23.66■■□□□ 1.38
SOX4-201ENST00000244745 TNMDQ9H2S6 317 aa23.66■■□□□ 1.38
SOX4-201ENST00000244745 GPRASP1Q5JY77 1395 aa23.66■■□□□ 1.38
SOX4-201ENST00000244745 SIL1Q9H173 461 aa23.66■■□□□ 1.38
SOX4-201ENST00000244745 CCDC141Q6ZP82 1450 aa23.66■■□□□ 1.38
SOX4-201ENST00000244745 ZNF396Q96N95 335 aaPredicted RBP23.66■■□□□ 1.38
SOX4-201ENST00000244745 RTEL1-TNFRSF6BF6WH68 1400 aa23.65■■□□□ 1.38
SOX4-201ENST00000244745 FCHSD2O94868 740 aa23.65■■□□□ 1.38
SOX4-201ENST00000244745 RUFY1Q96T51 708 aa23.65■■□□□ 1.38
SOX4-201ENST00000244745 RPRD2Q5VT52 1461 aaKnown RBP23.65■■□□□ 1.38
SOX4-201ENST00000244745 NFE2L2Q16236 605 aa23.64■■□□□ 1.38
SOX4-201ENST00000244745 LRPPRCP42704 1394 aaKnown RBP23.64■■□□□ 1.38
SOX4-201ENST00000244745 PLEKHO1Q53GL0 409 aaPredicted RBP23.64■■□□□ 1.37
SOX4-201ENST00000244745 TTLL5Q6EMB2 1281 aa23.64■■□□□ 1.37
SOX4-201ENST00000244745 UBE2Q2Q8WVN8 375 aa23.64■■□□□ 1.37
SOX4-201ENST00000244745 DUSP27Q5VZP5 1158 aa23.63■■□□□ 1.37
SOX4-201ENST00000244745 THUMPD2Q9BTF0 503 aaKnown RBP23.63■■□□□ 1.37
SOX4-201ENST00000244745 SRCIN1Q9C0H9 1055 aa23.63■■□□□ 1.37
SOX4-201ENST00000244745 NAP1L1P55209 391 aaKnown RBP23.62■■□□□ 1.37
SOX4-201ENST00000244745 SSH1Q8WYL5 1049 aa23.62■■□□□ 1.37
SOX4-201ENST00000244745 SMARCA5O60264 1052 aaPredicted RBP23.62■■□□□ 1.37
SOX4-201ENST00000244745 TBC1D2Q9BYX2 928 aa23.62■■□□□ 1.37
SOX4-201ENST00000244745 SYCE3A1L190 88 aa23.62■■□□□ 1.37
SOX4-201ENST00000244745 IL1RAPL2Q9NP60 686 aa23.62■■□□□ 1.37
SOX4-201ENST00000244745 CWC27Q6UX04 472 aaKnown RBP23.62■■□□□ 1.37
SOX4-201ENST00000244745 PDRG1Q9NUG6 133 aa23.62■■□□□ 1.37
SOX4-201ENST00000244745 STK38Q15208 465 aa23.61■■□□□ 1.37
SOX4-201ENST00000244745 PRDM10Q9NQV6 1147 aa23.61■■□□□ 1.37
SOX4-201ENST00000244745 LARP1BQ659C4 914 aaKnown RBP23.61■■□□□ 1.37
SOX4-201ENST00000244745 ATAD2Q6PL18 1390 aa23.61■■□□□ 1.37
SOX4-201ENST00000244745 BRMS1Q9HCU9 246 aa23.6■■□□□ 1.37
SOX4-201ENST00000244745 ANKRD1Q15327 319 aa23.6■■□□□ 1.37
SOX4-201ENST00000244745 CCDC112Q8NEF3 446 aa23.6■■□□□ 1.37
SOX4-201ENST00000244745 MAGI1Q96QZ7 1491 aaPredicted RBP23.6■■□□□ 1.37
SOX4-201ENST00000244745 KRT85P78386 507 aa23.6■■□□□ 1.37
SOX4-201ENST00000244745 KIF14Q15058 1648 aa23.6■■□□□ 1.37
SOX4-201ENST00000244745 JAKMIP1Q96N16 626 aaKnown RBP23.6■■□□□ 1.37
SOX4-201ENST00000244745 ZNF692Q9BU19 519 aaPredicted RBP23.6■■□□□ 1.37
SOX4-201ENST00000244745 RPAP2Q8IXW5 612 aaPredicted RBP23.59■■□□□ 1.37
SOX4-201ENST00000244745 ATP2B1P20020 1258 aa23.59■■□□□ 1.37
SOX4-201ENST00000244745 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
SOX4-201ENST00000244745 DISP3Q9P2K9 1392 aa23.59■■□□□ 1.37
SOX4-201ENST00000244745 KIAA0586Q9BVV6 1533 aa23.58■■□□□ 1.37
SOX4-201ENST00000244745 AACSQ86V21 672 aa23.58■■□□□ 1.37
SOX4-201ENST00000244745 NUTM1Q86Y26 1132 aa23.58■■□□□ 1.37
SOX4-201ENST00000244745 TTC39AQ5SRH9 613 aa23.58■■□□□ 1.37
SOX4-201ENST00000244745 SRGAP3O43295 1099 aa23.58■■□□□ 1.36
SOX4-201ENST00000244745 MIS18AQ9NYP9 233 aa23.57■■□□□ 1.36
SOX4-201ENST00000244745 IGHDP01880 384 aa23.57■■□□□ 1.36
SOX4-201ENST00000244745 XBP1P17861 261 aa23.57■■□□□ 1.36
SOX4-201ENST00000244745 ESCO1Q5FWF5 840 aa23.57■■□□□ 1.36
SOX4-201ENST00000244745 LEKR1Q6ZMV7 388 aa23.57■■□□□ 1.36
SOX4-201ENST00000244745 EXOC6BQ9Y2D4 811 aa23.56■■□□□ 1.36
SOX4-201ENST00000244745 CCP110O43303 1012 aa23.56■■□□□ 1.36
SOX4-201ENST00000244745 TRIM34Q9BYJ4 488 aa23.56■■□□□ 1.36
SOX4-201ENST00000244745 CAGE1Q8TC20 777 aa23.56■■□□□ 1.36
SOX4-201ENST00000244745 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
SOX4-201ENST00000244745 ME1P48163 572 aa23.56■■□□□ 1.36
SOX4-201ENST00000244745 SPATA32Q96LK8 384 aa23.56■■□□□ 1.36
SOX4-201ENST00000244745 TBC1D2BQ9UPU7 963 aa23.56■■□□□ 1.36
SOX4-201ENST00000244745 SSFA2P28290 1259 aa23.55■■□□□ 1.36
SOX4-201ENST00000244745 MTMR7Q9Y216 660 aa23.55■■□□□ 1.36
SOX4-201ENST00000244745 ALDH1L2Q3SY69 923 aa23.55■■□□□ 1.36
SOX4-201ENST00000244745 PDCL2Q8N4E4 241 aa23.54■■□□□ 1.36
SOX4-201ENST00000244745 ERCC4Q92889 916 aaPredicted RBP23.54■■□□□ 1.36
SOX4-201ENST00000244745 TNPO1Q92973 898 aaKnown RBP23.54■■□□□ 1.36
SOX4-201ENST00000244745 DCTN1Q14203 1278 aa23.54■■□□□ 1.36
SOX4-201ENST00000244745 PLB1Q6P1J6 1458 aa23.54■■□□□ 1.36
SOX4-201ENST00000244745 FAM135AQ9P2D6 1515 aa23.54■■□□□ 1.36
SOX4-201ENST00000244745 RRP12Q5JTH9 1297 aaKnown RBP23.54■■□□□ 1.36
SOX4-201ENST00000244745 SERPINC1P01008 464 aa23.53■■□□□ 1.36
SOX4-201ENST00000244745 CASTP20810 708 aaKnown RBP23.53■■□□□ 1.36
SOX4-201ENST00000244745 BRPF1P55201 1214 aaPredicted RBP23.53■■□□□ 1.36
SOX4-201ENST00000244745 SART3Q15020 963 aaKnown RBP23.53■■□□□ 1.36
SOX4-201ENST00000244745 MCM10Q7L590 875 aa23.53■■□□□ 1.36
SOX4-201ENST00000244745 MYL6BP14649 208 aa23.53■■□□□ 1.36
SOX4-201ENST00000244745 ATF3P18847 181 aa23.53■■□□□ 1.36
SOX4-201ENST00000244745 NUP62CLQ9H1M0 184 aa23.53■■□□□ 1.36
SOX4-201ENST00000244745 BLOC1S2Q6QNY1 142 aa23.53■■□□□ 1.36
SOX4-201ENST00000244745 ZSCAN31Q96LW9 406 aaPredicted RBP23.53■■□□□ 1.36
SOX4-201ENST00000244745 SLC52A1Q9NWF4 448 aa23.52■■□□□ 1.36
SOX4-201ENST00000244745 H0YHG0 523 aa23.52■■□□□ 1.36
SOX4-201ENST00000244745 CBX1P83916 185 aa23.52■■□□□ 1.36
SOX4-201ENST00000244745 CCDC158Q5M9N0 1113 aa23.52■■□□□ 1.36
SOX4-201ENST00000244745 PDCL3Q9H2J4 239 aa23.52■■□□□ 1.36
SOX4-201ENST00000244745 ZNF530Q6P9A1 599 aaPredicted RBP23.51■■□□□ 1.35
SOX4-201ENST00000244745 ERICH4A6NGS2 130 aa23.51■■□□□ 1.35
SOX4-201ENST00000244745 FAM177BA6PVY3 158 aa23.51■■□□□ 1.35
SOX4-201ENST00000244745 TRIM27P14373 513 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms