RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 USP31Q70CQ4 1352 aa14.58□□□□□ -0.08
TNFAIP3-201ENST00000237289 IQSEC2Q5JU85 1478 aa14.58□□□□□ -0.08
TNFAIP3-201ENST00000237289 ITSN1Q15811 1721 aa14.58□□□□□ -0.08
TNFAIP3-201ENST00000237289 RUNDC1Q96C34 613 aa14.58□□□□□ -0.08
TNFAIP3-201ENST00000237289 FMN2Q9NZ56 1722 aa14.57□□□□□ -0.08
TNFAIP3-201ENST00000237289 EIF4A2Q14240 407 aaKnown RBP14.57□□□□□ -0.08
TNFAIP3-201ENST00000237289 SPG7Q9UQ90 795 aa14.57□□□□□ -0.08
TNFAIP3-201ENST00000237289 FCHSD2O94868 740 aa14.57□□□□□ -0.08
TNFAIP3-201ENST00000237289 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
TNFAIP3-201ENST00000237289 AATKQ6ZMQ8 1374 aa14.56□□□□□ -0.08
TNFAIP3-201ENST00000237289 CALD1Q05682 793 aaKnown RBP14.56□□□□□ -0.08
TNFAIP3-201ENST00000237289 GAS2L2Q8NHY3 880 aa14.56□□□□□ -0.08
TNFAIP3-201ENST00000237289 RRP7AQ9Y3A4 280 aaKnown RBP14.56□□□□□ -0.08
TNFAIP3-201ENST00000237289 DDX54Q8TDD1 881 aaKnown RBP14.55□□□□□ -0.08
TNFAIP3-201ENST00000237289 KIF1AQ12756 1690 aa14.55□□□□□ -0.08
TNFAIP3-201ENST00000237289 APAF1O14727 1248 aa14.55□□□□□ -0.08
TNFAIP3-201ENST00000237289 FAM83GA6ND36 823 aa14.54□□□□□ -0.08
TNFAIP3-201ENST00000237289 NPM2Q86SE8 214 aaKnown RBP14.54□□□□□ -0.08
TNFAIP3-201ENST00000237289 EXOC5O00471 708 aa14.54□□□□□ -0.08
TNFAIP3-201ENST00000237289 CCDC184Q52MB2 194 aa14.54□□□□□ -0.08
TNFAIP3-201ENST00000237289 PNPLA6Q8IY17 1366 aa14.53□□□□□ -0.08
TNFAIP3-201ENST00000237289 RIPK4P57078 832 aa14.53□□□□□ -0.08
TNFAIP3-201ENST00000237289 PNISRQ8TF01 805 aaKnown RBP14.53□□□□□ -0.08
TNFAIP3-201ENST00000237289 TEFQ10587 303 aa14.53□□□□□ -0.08
TNFAIP3-201ENST00000237289 ZNF530Q6P9A1 599 aaPredicted RBP14.53□□□□□ -0.08
TNFAIP3-201ENST00000237289 SYTL4Q96C24 671 aaPredicted RBP14.53□□□□□ -0.08
TNFAIP3-201ENST00000237289 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
TNFAIP3-201ENST00000237289 CD163L1Q9NR16 1453 aa14.53□□□□□ -0.08
TNFAIP3-201ENST00000237289 EYA1Q99502 592 aa14.52□□□□□ -0.08
TNFAIP3-201ENST00000237289 ZNF772Q68DY9 489 aaPredicted RBP14.52□□□□□ -0.08
TNFAIP3-201ENST00000237289 AMOTQ4VCS5 1084 aa14.52□□□□□ -0.09
TNFAIP3-201ENST00000237289 USP19O94966 1318 aa14.52□□□□□ -0.09
TNFAIP3-201ENST00000237289 TRPC5Q9UL62 973 aaPredicted RBP14.51□□□□□ -0.09
TNFAIP3-201ENST00000237289 INSRP06213 1382 aa14.51□□□□□ -0.09
TNFAIP3-201ENST00000237289 STRCP1A6NGW2 1772 aa14.51□□□□□ -0.09
TNFAIP3-201ENST00000237289 RTL1A6NKG5 1358 aa14.51□□□□□ -0.09
TNFAIP3-201ENST00000237289 KIF24Q5T7B8 1368 aa14.51□□□□□ -0.09
TNFAIP3-201ENST00000237289 IL2RBP14784 551 aa14.51□□□□□ -0.09
TNFAIP3-201ENST00000237289 UNC5CLQ8IV45 518 aa14.5□□□□□ -0.09
TNFAIP3-201ENST00000237289 TCP11L2Q8N4U5 519 aa14.5□□□□□ -0.09
TNFAIP3-201ENST00000237289 QTRT2Q9H974 415 aaKnown RBP14.5□□□□□ -0.09
TNFAIP3-201ENST00000237289 LARP1Q6PKG0 1096 aaKnown RBP14.5□□□□□ -0.09
TNFAIP3-201ENST00000237289 OVOS2A0A0J9YW53 1432 aa14.49□□□□□ -0.09
TNFAIP3-201ENST00000237289 OVOS2Q6IE36 1432 aa14.49□□□□□ -0.09
TNFAIP3-201ENST00000237289 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
TNFAIP3-201ENST00000237289 IL13P35225 146 aa14.49□□□□□ -0.09
TNFAIP3-201ENST00000237289 AFF2P51816 1311 aa14.49□□□□□ -0.09
TNFAIP3-201ENST00000237289 NGEFQ8N5V2 710 aa14.49□□□□□ -0.09
TNFAIP3-201ENST00000237289 CDCA7Q9BWT1 371 aaPredicted RBP14.49□□□□□ -0.09
TNFAIP3-201ENST00000237289 NEFLP07196 543 aa14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 DDB1Q16531 1140 aa14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 NBPF6Q5VWK0 638 aa14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 NBPF4Q96M43 638 aa14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 CANXP27824 592 aaKnown RBP14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 ROBO1Q9Y6N7 1651 aa14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 AEBP1Q8IUX7 1158 aa14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 WDR17Q8IZU2 1322 aa14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 ZCRB1Q8TBF4 217 aaKnown RBP14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 ERBB3P21860 1342 aa14.48□□□□□ -0.09
TNFAIP3-201ENST00000237289 AXIN2Q9Y2T1 843 aa14.47□□□□□ -0.09
TNFAIP3-201ENST00000237289 FAM98CQ17RN3 349 aaKnown RBP14.47□□□□□ -0.09
TNFAIP3-201ENST00000237289 CARD10Q9BWT7 1032 aa14.46□□□□□ -0.09
TNFAIP3-201ENST00000237289 SSH2Q76I76 1423 aa14.46□□□□□ -0.09
TNFAIP3-201ENST00000237289 PXDNQ92626 1479 aa14.46□□□□□ -0.09
TNFAIP3-201ENST00000237289 MYH16Q9H6N6 1097 aa14.46□□□□□ -0.1
TNFAIP3-201ENST00000237289 IFNL2Q8IZJ0 200 aa14.45□□□□□ -0.1
TNFAIP3-201ENST00000237289 TTC5Q8N0Z6 440 aa14.45□□□□□ -0.1
TNFAIP3-201ENST00000237289 BLMP54132 1417 aaPredicted RBP14.45□□□□□ -0.1
TNFAIP3-201ENST00000237289 NFE2L2Q16236 605 aa14.45□□□□□ -0.1
TNFAIP3-201ENST00000237289 RGPD8O14715 1765 aaPredicted RBP14.45□□□□□ -0.1
TNFAIP3-201ENST00000237289 GNAT3A8MTJ3 354 aa14.45□□□□□ -0.1
TNFAIP3-201ENST00000237289 GOLGA2Q08379 1002 aa14.45□□□□□ -0.1
TNFAIP3-201ENST00000237289 USP32Q8NFA0 1604 aa14.44□□□□□ -0.1
TNFAIP3-201ENST00000237289 CABP4P57796 275 aa14.44□□□□□ -0.1
TNFAIP3-201ENST00000237289 ARXQ96QS3 562 aa14.44□□□□□ -0.1
TNFAIP3-201ENST00000237289 CPDO75976 1380 aa14.44□□□□□ -0.1
TNFAIP3-201ENST00000237289 RXRBP28702 533 aa14.43□□□□□ -0.1
TNFAIP3-201ENST00000237289 TMPOP42166 694 aaKnown RBP14.43□□□□□ -0.1
TNFAIP3-201ENST00000237289 PHLPP1O60346 1717 aa14.43□□□□□ -0.1
TNFAIP3-201ENST00000237289 SF3B2Q13435 895 aaKnown RBP14.42□□□□□ -0.1
TNFAIP3-201ENST00000237289 CDK12Q9NYV4 1490 aaPredicted RBP14.42□□□□□ -0.1
TNFAIP3-201ENST00000237289 THRAP3Q9Y2W1 955 aaKnown RBP14.41□□□□□ -0.1
TNFAIP3-201ENST00000237289 MPRIPQ6WCQ1 1025 aa14.41□□□□□ -0.1
TNFAIP3-201ENST00000237289 CHMP4AQ9BY43 222 aa14.41□□□□□ -0.1
TNFAIP3-201ENST00000237289 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
TNFAIP3-201ENST00000237289 GNAI1P63096 354 aa14.4□□□□□ -0.1
TNFAIP3-201ENST00000237289 TSPYL4Q9UJ04 414 aa14.4□□□□□ -0.1
TNFAIP3-201ENST00000237289 MYOM1P52179 1685 aa14.39□□□□□ -0.11
TNFAIP3-201ENST00000237289 IGSF1Q8N6C5 1336 aa14.39□□□□□ -0.11
TNFAIP3-201ENST00000237289 PCDH11XQ9BZA7 1347 aa14.39□□□□□ -0.11
TNFAIP3-201ENST00000237289 PCDH11YQ9BZA8 1340 aa14.39□□□□□ -0.11
TNFAIP3-201ENST00000237289 VPS72Q15906 364 aa14.39□□□□□ -0.11
TNFAIP3-201ENST00000237289 GJD4Q96KN9 370 aaPredicted RBP14.39□□□□□ -0.11
TNFAIP3-201ENST00000237289 MTHFSDQ2M296 383 aaKnown RBP14.39□□□□□ -0.11
TNFAIP3-201ENST00000237289 ILDR1Q86SU0 546 aaPredicted RBP14.39□□□□□ -0.11
TNFAIP3-201ENST00000237289 RBM6P78332 1123 aaKnown RBP14.38□□□□□ -0.11
TNFAIP3-201ENST00000237289 AKAP4Q5JQC9 854 aa14.38□□□□□ -0.11
TNFAIP3-201ENST00000237289 TMOD3Q9NYL9 352 aa14.38□□□□□ -0.11
TNFAIP3-201ENST00000237289 AHDC1Q5TGY3 1603 aaPredicted RBP14.38□□□□□ -0.11
TNFAIP3-201ENST00000237289 MCM10Q7L590 875 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms