RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 NUTM2AQ8IVF1 878 aaPredicted RBP17.56■□□□□ 0.4
UBR5-201ENST00000220959 DDX54Q8TDD1 881 aaKnown RBP17.56■□□□□ 0.4
UBR5-201ENST00000220959 DNAI2Q9GZS0 605 aa17.56■□□□□ 0.4
UBR5-201ENST00000220959 ME1P48163 572 aa17.56■□□□□ 0.4
UBR5-201ENST00000220959 PPM1FP49593 454 aaPredicted RBP17.56■□□□□ 0.4
UBR5-201ENST00000220959 STAC3Q96MF2 364 aa17.56■□□□□ 0.4
UBR5-201ENST00000220959 MTHFSP49914 203 aa17.55■□□□□ 0.4
UBR5-201ENST00000220959 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
UBR5-201ENST00000220959 PROSER2Q86WR7 435 aaPredicted RBP17.54■□□□□ 0.4
UBR5-201ENST00000220959 TNMDQ9H2S6 317 aa17.54■□□□□ 0.4
UBR5-201ENST00000220959 CCDC112Q8NEF3 446 aa17.54■□□□□ 0.4
UBR5-201ENST00000220959 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
UBR5-201ENST00000220959 SIL1Q9H173 461 aa17.54■□□□□ 0.4
UBR5-201ENST00000220959 SSR1P43307 286 aaKnown RBP17.54■□□□□ 0.4
UBR5-201ENST00000220959 CBFA2T2O43439 604 aa17.54■□□□□ 0.4
UBR5-201ENST00000220959 FKBP4Q02790 459 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBR5-201ENST00000220959 NFKBIBQ15653 356 aa17.53■□□□□ 0.4
UBR5-201ENST00000220959 HDGFL1Q5TGJ6 251 aa17.53■□□□□ 0.4
UBR5-201ENST00000220959 FAM177A1Q8N128 213 aaPredicted RBP17.53■□□□□ 0.4
UBR5-201ENST00000220959 POTEJP0CG39 1038 aa17.53■□□□□ 0.4
UBR5-201ENST00000220959 MYL6BP14649 208 aa17.53■□□□□ 0.4
UBR5-201ENST00000220959 TDO2P48775 406 aa17.53■□□□□ 0.4
UBR5-201ENST00000220959 FANCIQ9NVI1 1328 aa17.53■□□□□ 0.4
UBR5-201ENST00000220959 EIF3JO75822 258 aaKnown RBP17.52■□□□□ 0.4
UBR5-201ENST00000220959 TWISTNBQ3B726 338 aaPredicted RBP17.52■□□□□ 0.4
UBR5-201ENST00000220959 GCC1Q96CN9 775 aa17.52■□□□□ 0.4
UBR5-201ENST00000220959 IQCEQ6IPM2 695 aa17.52■□□□□ 0.4
UBR5-201ENST00000220959 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.4
UBR5-201ENST00000220959 CDKL5O76039 1030 aa17.52■□□□□ 0.4
UBR5-201ENST00000220959 JAKMIP3Q5VZ66 844 aa17.52■□□□□ 0.4
UBR5-201ENST00000220959 TMEM132EQ6IEE7 984 aa17.52■□□□□ 0.39
UBR5-201ENST00000220959 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
UBR5-201ENST00000220959 UBAC1Q9BSL1 405 aa17.51■□□□□ 0.39
UBR5-201ENST00000220959 LRRCC1Q9C099 1032 aa17.51■□□□□ 0.39
UBR5-201ENST00000220959 USP5P45974 858 aa17.51■□□□□ 0.39
UBR5-201ENST00000220959 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
UBR5-201ENST00000220959 CNTLNQ9NXG0 1405 aa17.51■□□□□ 0.39
UBR5-201ENST00000220959 ERLIN1O75477 346 aa17.51■□□□□ 0.39
UBR5-201ENST00000220959 KRT85P78386 507 aa17.5■□□□□ 0.39
UBR5-201ENST00000220959 C1orf115Q9H7X2 142 aa17.5■□□□□ 0.39
UBR5-201ENST00000220959 HMGN5P82970 282 aaKnown RBP17.5■□□□□ 0.39
UBR5-201ENST00000220959 CEP57L1Q8IYX8 460 aa17.5■□□□□ 0.39
UBR5-201ENST00000220959 CCT4P50991 539 aaKnown RBP17.5■□□□□ 0.39
UBR5-201ENST00000220959 TXNDC2Q86VQ3 553 aa17.5■□□□□ 0.39
UBR5-201ENST00000220959 CETN2P41208 172 aa17.5■□□□□ 0.39
UBR5-201ENST00000220959 PRKAR2BP31323 418 aa17.49■□□□□ 0.39
UBR5-201ENST00000220959 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
UBR5-201ENST00000220959 ANAPC15P60006 121 aa17.49■□□□□ 0.39
UBR5-201ENST00000220959 ZNF428Q96B54 188 aa17.49■□□□□ 0.39
UBR5-201ENST00000220959 KIAA1328Q86T90 577 aa17.49■□□□□ 0.39
UBR5-201ENST00000220959 TMOD2Q9NZR1 351 aa17.49■□□□□ 0.39
UBR5-201ENST00000220959 MAP4K4O95819 1239 aaPredicted RBP17.49■□□□□ 0.39
UBR5-201ENST00000220959 CCDC91Q7Z6B0 441 aa17.49■□□□□ 0.39
UBR5-201ENST00000220959 TNIP1Q15025 636 aa17.48■□□□□ 0.39
UBR5-201ENST00000220959 WDHD1O75717 1129 aaPredicted RBP17.48■□□□□ 0.39
UBR5-201ENST00000220959 FAM193AP78312 1265 aa17.48■□□□□ 0.39
UBR5-201ENST00000220959 LARP1BQ659C4 914 aaKnown RBP17.48■□□□□ 0.39
UBR5-201ENST00000220959 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
UBR5-201ENST00000220959 WDR33Q9C0J8 1336 aaKnown RBP17.48■□□□□ 0.39
UBR5-201ENST00000220959 LRP2BPQ9P2M1 347 aa17.48■□□□□ 0.39
UBR5-201ENST00000220959 ZNF397Q8NF99 534 aaPredicted RBP17.48■□□□□ 0.39
UBR5-201ENST00000220959 TAF4BQ92750 862 aa17.47■□□□□ 0.39
UBR5-201ENST00000220959 CTNNA3Q9UI47 895 aa17.47■□□□□ 0.39
UBR5-201ENST00000220959 CFAP45Q9UL16 551 aa17.47■□□□□ 0.39
UBR5-201ENST00000220959 DHX37Q8IY37 1157 aaKnown RBP17.47■□□□□ 0.39
UBR5-201ENST00000220959 RAI14Q9P0K7 980 aa17.47■□□□□ 0.39
UBR5-201ENST00000220959 NOB1Q9ULX3 412 aaKnown RBP17.47■□□□□ 0.39
UBR5-201ENST00000220959 BLOC1S2Q6QNY1 142 aa17.47■□□□□ 0.39
UBR5-201ENST00000220959 EIF5P55010 431 aaKnown RBP17.46■□□□□ 0.39
UBR5-201ENST00000220959 TCP11L2Q8N4U5 519 aa17.46■□□□□ 0.39
UBR5-201ENST00000220959 EXOSC9Q06265 439 aaKnown RBP17.46■□□□□ 0.39
UBR5-201ENST00000220959 PPP1R12BO60237 982 aaPredicted RBP17.46■□□□□ 0.39
UBR5-201ENST00000220959 PIBF1Q8WXW3 757 aa17.46■□□□□ 0.39
UBR5-201ENST00000220959 HMGB2P26583 209 aaKnown RBP17.46■□□□□ 0.39
UBR5-201ENST00000220959 TMEM87AQ8NBN3 555 aa17.46■□□□□ 0.38
UBR5-201ENST00000220959 PPP4R3AQ6IN85 833 aa17.45■□□□□ 0.38
UBR5-201ENST00000220959 WASF1Q92558 559 aa17.45■□□□□ 0.38
UBR5-201ENST00000220959 CEP131Q9UPN4 1083 aa17.45■□□□□ 0.38
UBR5-201ENST00000220959 PDZRN3Q9UPQ7 1066 aa17.45■□□□□ 0.38
UBR5-201ENST00000220959 SRCIN1Q9C0H9 1055 aa17.45■□□□□ 0.38
UBR5-201ENST00000220959 CEP126Q9P2H0 1117 aa17.45■□□□□ 0.38
UBR5-201ENST00000220959 SCLT1Q96NL6 688 aa17.45■□□□□ 0.38
UBR5-201ENST00000220959 ZNF287Q9HBT7 754 aa17.45■□□□□ 0.38
UBR5-201ENST00000220959 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
UBR5-201ENST00000220959 CHMP4BP1P59074 171 aa17.44■□□□□ 0.38
UBR5-201ENST00000220959 EPB41L2O43491 1005 aaKnown RBP17.44■□□□□ 0.38
UBR5-201ENST00000220959 SMTNL1A8MU46 457 aa17.44■□□□□ 0.38
UBR5-201ENST00000220959 SULT6B1Q6IMI4 303 aa17.44■□□□□ 0.38
UBR5-201ENST00000220959 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
UBR5-201ENST00000220959 MYOM3Q5VTT5 1437 aa17.43■□□□□ 0.38
UBR5-201ENST00000220959 RRBP1Q9P2E9 1410 aaKnown RBP17.43■□□□□ 0.38
UBR5-201ENST00000220959 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
UBR5-201ENST00000220959 AACSQ86V21 672 aa17.43■□□□□ 0.38
UBR5-201ENST00000220959 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
UBR5-201ENST00000220959 SPATA32Q96LK8 384 aa17.42■□□□□ 0.38
UBR5-201ENST00000220959 STAMBPO95630 424 aa17.42■□□□□ 0.38
UBR5-201ENST00000220959 SEC63Q9UGP8 760 aaKnown RBP17.42■□□□□ 0.38
UBR5-201ENST00000220959 MAP2K1Q02750 393 aaPredicted RBP17.42■□□□□ 0.38
UBR5-201ENST00000220959 TAF3Q5VWG9 929 aa17.42■□□□□ 0.38
UBR5-201ENST00000220959 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms