RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 LRRC37A3O60309 1634 aa16.8■□□□□ 0.28
SNU13-201ENST00000215956 OVOS2A0A0G2JMS6 1433 aa16.8■□□□□ 0.28
SNU13-201ENST00000215956 OVOS2A0A0J9YW53 1432 aa16.8■□□□□ 0.28
SNU13-201ENST00000215956 OVOS2Q6IE36 1432 aa16.8■□□□□ 0.28
SNU13-201ENST00000215956 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
SNU13-201ENST00000215956 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
SNU13-201ENST00000215956 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
SNU13-201ENST00000215956 NBPF1Q3BBV0 1214 aa16.79■□□□□ 0.28
SNU13-201ENST00000215956 CCDC61Q9Y6R9 512 aa16.79■□□□□ 0.28
SNU13-201ENST00000215956 WNK3Q9BYP7 1800 aa16.78■□□□□ 0.28
SNU13-201ENST00000215956 PLEKHG3A1L390 1219 aa16.78■□□□□ 0.28
SNU13-201ENST00000215956 CRB1P82279 1406 aa16.77■□□□□ 0.28
SNU13-201ENST00000215956 AKAP12Q02952 1782 aa16.76■□□□□ 0.27
SNU13-201ENST00000215956 GCP02774 474 aa16.75■□□□□ 0.27
SNU13-201ENST00000215956 TMF1P82094 1093 aa16.75■□□□□ 0.27
SNU13-201ENST00000215956 CDCA8Q53HL2 280 aa16.75■□□□□ 0.27
SNU13-201ENST00000215956 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
SNU13-201ENST00000215956 MYOM1P52179 1685 aa16.75■□□□□ 0.27
SNU13-201ENST00000215956 PLSCR1O15162 318 aa16.74■□□□□ 0.27
SNU13-201ENST00000215956 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
SNU13-201ENST00000215956 PPIP5K1Q6PFW1 1433 aa16.73■□□□□ 0.27
SNU13-201ENST00000215956 SLIT3O75094 1523 aa16.71■□□□□ 0.27
SNU13-201ENST00000215956 DDB1Q16531 1140 aa16.71■□□□□ 0.27
SNU13-201ENST00000215956 COL18A1P39060 1754 aa16.71■□□□□ 0.27
SNU13-201ENST00000215956 BRD4O60885 1362 aaPredicted RBP16.7■□□□□ 0.26
SNU13-201ENST00000215956 AATKQ6ZMQ8 1374 aa16.7■□□□□ 0.26
SNU13-201ENST00000215956 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
SNU13-201ENST00000215956 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
SNU13-201ENST00000215956 CHD4Q14839 1912 aa16.7■□□□□ 0.26
SNU13-201ENST00000215956 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
SNU13-201ENST00000215956 PDGFDQ9GZP0 370 aaPredicted RBP16.7■□□□□ 0.26
SNU13-201ENST00000215956 ZBTB7AO95365 584 aa16.69■□□□□ 0.26
SNU13-201ENST00000215956 SRPK2P78362 688 aaKnown RBP16.69■□□□□ 0.26
SNU13-201ENST00000215956 TESK2Q96S53 571 aa16.69■□□□□ 0.26
SNU13-201ENST00000215956 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
SNU13-201ENST00000215956 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
SNU13-201ENST00000215956 PIK3C2AO00443 1686 aa16.68■□□□□ 0.26
SNU13-201ENST00000215956 QRICH2Q9H0J4 1663 aa16.68■□□□□ 0.26
SNU13-201ENST00000215956 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
SNU13-201ENST00000215956 BCL9O00512 1426 aa16.68■□□□□ 0.26
SNU13-201ENST00000215956 USP6P35125 1406 aa16.68■□□□□ 0.26
SNU13-201ENST00000215956 PELP1Q8IZL8 1130 aaKnown RBP16.67■□□□□ 0.26
SNU13-201ENST00000215956 PTGER2P43116 358 aa16.67■□□□□ 0.26
SNU13-201ENST00000215956 NLRP6P59044 892 aa16.67■□□□□ 0.26
SNU13-201ENST00000215956 PROM2Q8N271 834 aa16.67■□□□□ 0.26
SNU13-201ENST00000215956 ZNF784Q8NCA9 323 aaPredicted RBP16.67■□□□□ 0.26
SNU13-201ENST00000215956 MARCH10Q8NA82 808 aaPredicted RBP16.66■□□□□ 0.26
SNU13-201ENST00000215956 CABP2Q9NPB3 220 aa16.66■□□□□ 0.26
SNU13-201ENST00000215956 WDR17Q8IZU2 1322 aa16.66■□□□□ 0.26
SNU13-201ENST00000215956 KTN1Q86UP2 1357 aaKnown RBP16.65■□□□□ 0.26
SNU13-201ENST00000215956 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
SNU13-201ENST00000215956 CDCA7Q9BWT1 371 aaPredicted RBP16.64■□□□□ 0.25
SNU13-201ENST00000215956 STK32BQ9NY57 414 aa16.64■□□□□ 0.25
SNU13-201ENST00000215956 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
SNU13-201ENST00000215956 CENPJQ9HC77 1338 aaPredicted RBP16.64■□□□□ 0.25
SNU13-201ENST00000215956 CPSF1Q10570 1443 aaKnown RBP16.64■□□□□ 0.25
SNU13-201ENST00000215956 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
SNU13-201ENST00000215956 FHDC1Q9C0D6 1143 aaPredicted RBP16.63■□□□□ 0.25
SNU13-201ENST00000215956 AXIN2Q9Y2T1 843 aa16.63■□□□□ 0.25
SNU13-201ENST00000215956 SLC15A2Q16348 729 aa16.62■□□□□ 0.25
SNU13-201ENST00000215956 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
SNU13-201ENST00000215956 PRKRIP1Q9H875 184 aaPredicted RBP16.62■□□□□ 0.25
SNU13-201ENST00000215956 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
SNU13-201ENST00000215956 SYT17Q9BSW7 474 aa16.61■□□□□ 0.25
SNU13-201ENST00000215956 NHSQ6T4R5 1651 aa16.61■□□□□ 0.25
SNU13-201ENST00000215956 MTFR1LQ9H019 292 aa16.6■□□□□ 0.25
SNU13-201ENST00000215956 GOLGB1Q14789 3259 aaKnown RBP16.59■□□□□ 0.25
SNU13-201ENST00000215956 TNS2Q63HR2 1409 aa16.59■□□□□ 0.25
SNU13-201ENST00000215956 SGIP1Q9BQI5 828 aa16.59■□□□□ 0.25
SNU13-201ENST00000215956 CARD10Q9BWT7 1032 aa16.59■□□□□ 0.25
SNU13-201ENST00000215956 PAPPAQ13219 1627 aa16.58■□□□□ 0.25
SNU13-201ENST00000215956 KAT6BQ8WYB5 2073 aa16.58■□□□□ 0.24
SNU13-201ENST00000215956 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
SNU13-201ENST00000215956 ARHGEF25Q86VW2 580 aa16.58■□□□□ 0.24
SNU13-201ENST00000215956 SENP3-EIF4A1A0A087X0R7 540 aa16.57■□□□□ 0.24
SNU13-201ENST00000215956 RALBP1Q15311 655 aa16.57■□□□□ 0.24
SNU13-201ENST00000215956 KCNH5Q8NCM2 988 aa16.57■□□□□ 0.24
SNU13-201ENST00000215956 PUS7Q96PZ0 661 aaKnown RBP16.57■□□□□ 0.24
SNU13-201ENST00000215956 NFAT5O94916 1531 aa16.56■□□□□ 0.24
SNU13-201ENST00000215956 ABCC6O95255 1503 aa16.56■□□□□ 0.24
SNU13-201ENST00000215956 EXOC5O00471 708 aa16.56■□□□□ 0.24
SNU13-201ENST00000215956 BTAF1O14981 1849 aa16.56■□□□□ 0.24
SNU13-201ENST00000215956 SOX12O15370 315 aa16.56■□□□□ 0.24
SNU13-201ENST00000215956 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
SNU13-201ENST00000215956 TTC21BQ7Z4L5 1316 aa16.54■□□□□ 0.24
SNU13-201ENST00000215956 C1QTNF8P60827 252 aa16.54■□□□□ 0.24
SNU13-201ENST00000215956 ARXQ96QS3 562 aa16.54■□□□□ 0.24
SNU13-201ENST00000215956 EVC2Q86UK5 1308 aa16.53■□□□□ 0.24
SNU13-201ENST00000215956 TTC21AQ8NDW8 1320 aa16.52■□□□□ 0.24
SNU13-201ENST00000215956 QSER1Q2KHR3 1735 aa16.52■□□□□ 0.23
SNU13-201ENST00000215956 ACSBG1Q96GR2 724 aa16.52■□□□□ 0.23
SNU13-201ENST00000215956 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.23
SNU13-201ENST00000215956 MON2Q7Z3U7 1717 aa16.51■□□□□ 0.23
SNU13-201ENST00000215956 CEP350Q5VT06 3117 aa16.51■□□□□ 0.23
SNU13-201ENST00000215956 PANK3Q9H999 370 aa16.51■□□□□ 0.23
SNU13-201ENST00000215956 LTN1O94822 1766 aa16.51■□□□□ 0.23
SNU13-201ENST00000215956 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
SNU13-201ENST00000215956 MRS2Q9HD23 443 aa16.49■□□□□ 0.23
SNU13-201ENST00000215956 KNSTRNQ9Y448 316 aa16.49■□□□□ 0.23
SNU13-201ENST00000215956 USP54Q70EL1 1684 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms