RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 MRPL50Q8N5N7 158 aaKnown RBP20.99■□□□□ 0.95
PTPN18-201ENST00000175756 RBM25P49756 843 aaKnown RBP20.99■□□□□ 0.95
PTPN18-201ENST00000175756 SNX21Q969T3 373 aa20.98■□□□□ 0.95
PTPN18-201ENST00000175756 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
PTPN18-201ENST00000175756 ABCC11Q96J66 1382 aa20.98■□□□□ 0.95
PTPN18-201ENST00000175756 IQGAP3Q86VI3 1631 aa20.98■□□□□ 0.95
PTPN18-201ENST00000175756 FSD2A1L4K1 749 aa20.98■□□□□ 0.95
PTPN18-201ENST00000175756 FKBP5Q13451 457 aaPredicted RBP20.98■□□□□ 0.95
PTPN18-201ENST00000175756 NCKAP5LQ9HCH0 1330 aa20.98■□□□□ 0.95
PTPN18-201ENST00000175756 SYCE3A1L190 88 aa20.97■□□□□ 0.95
PTPN18-201ENST00000175756 ZGPATQ8N5A5 531 aaKnown RBP20.97■□□□□ 0.95
PTPN18-201ENST00000175756 PLEKHF1Q96S99 279 aa20.97■□□□□ 0.95
PTPN18-201ENST00000175756 TSPYL4Q9UJ04 414 aa20.97■□□□□ 0.95
PTPN18-201ENST00000175756 KCNJ4P48050 445 aa20.96■□□□□ 0.95
PTPN18-201ENST00000175756 UPF3BQ9BZI7 483 aaKnown RBP20.96■□□□□ 0.95
PTPN18-201ENST00000175756 XPCQ01831 940 aaPredicted RBP20.96■□□□□ 0.95
PTPN18-201ENST00000175756 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
PTPN18-201ENST00000175756 IL16Q14005 1332 aa20.95■□□□□ 0.94
PTPN18-201ENST00000175756 ZNF428Q96B54 188 aa20.95■□□□□ 0.94
PTPN18-201ENST00000175756 ISY1Q9ULR0 285 aaKnown RBP20.95■□□□□ 0.94
PTPN18-201ENST00000175756 CHMP3Q9Y3E7 222 aa20.95■□□□□ 0.94
PTPN18-201ENST00000175756 UNC13BO14795 1591 aa20.95■□□□□ 0.94
PTPN18-201ENST00000175756 MAP4K4O95819 1239 aaPredicted RBP20.95■□□□□ 0.94
PTPN18-201ENST00000175756 MYO5CQ9NQX4 1742 aa20.95■□□□□ 0.94
PTPN18-201ENST00000175756 GDPD2Q9HCC8 539 aa20.94■□□□□ 0.94
PTPN18-201ENST00000175756 PKP1Q13835 747 aa20.94■□□□□ 0.94
PTPN18-201ENST00000175756 ZSCAN30Q86W11 494 aa20.94■□□□□ 0.94
PTPN18-201ENST00000175756 SDSP20132 328 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 AMPHP49418 695 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 AEBP1Q8IUX7 1158 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 MEIS3Q99687 375 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 IFT57Q9NWB7 429 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 SLC52A1Q9NWF4 448 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 CLTCL1P53675 1640 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 MADDQ8WXG6 1647 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 TRPM2O94759 1503 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 ZNF518AQ6AHZ1 1483 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 RTEL1-TNFRSF6BF6WH68 1400 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 NUTM2GQ5VZR2 741 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 LARP6Q9BRS8 491 aaKnown RBP20.93■□□□□ 0.94
PTPN18-201ENST00000175756 NSD2O96028 1365 aa20.93■□□□□ 0.94
PTPN18-201ENST00000175756 PLEKHM2Q8IWE5 1019 aa20.92■□□□□ 0.94
PTPN18-201ENST00000175756 ERC2O15083 957 aa20.92■□□□□ 0.94
PTPN18-201ENST00000175756 EIF2S2P20042 333 aaKnown RBP20.91■□□□□ 0.94
PTPN18-201ENST00000175756 TTC22Q5TAA0 569 aa20.91■□□□□ 0.94
PTPN18-201ENST00000175756 IL1RAPL2Q9NP60 686 aa20.91■□□□□ 0.94
PTPN18-201ENST00000175756 KLHL40Q2TBA0 621 aa20.9■□□□□ 0.94
PTPN18-201ENST00000175756 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.9■□□□□ 0.94
PTPN18-201ENST00000175756 TAOK2Q9UL54 1235 aa20.9■□□□□ 0.94
PTPN18-201ENST00000175756 ZSCAN23Q3MJ62 389 aa20.89■□□□□ 0.94
PTPN18-201ENST00000175756 ERBB4Q15303 1308 aa20.89■□□□□ 0.94
PTPN18-201ENST00000175756 ATP7AQ04656 1500 aa20.89■□□□□ 0.93
PTPN18-201ENST00000175756 SYAP1Q96A49 352 aaPredicted RBP20.89■□□□□ 0.93
PTPN18-201ENST00000175756 PRIM1P49642 420 aaKnown RBP20.89■□□□□ 0.93
PTPN18-201ENST00000175756 KIAA2012Q0VF49 1180 aa20.89■□□□□ 0.93
PTPN18-201ENST00000175756 DTNBO60941 627 aa20.88■□□□□ 0.93
PTPN18-201ENST00000175756 GSPT1P15170 499 aaKnown RBP20.88■□□□□ 0.93
PTPN18-201ENST00000175756 SIRT2Q8IXJ6 389 aa20.88■□□□□ 0.93
PTPN18-201ENST00000175756 NGDNQ8NEJ9 315 aaKnown RBP20.88■□□□□ 0.93
PTPN18-201ENST00000175756 RRP9O43818 475 aaKnown RBP20.88■□□□□ 0.93
PTPN18-201ENST00000175756 CD109Q6YHK3 1445 aa20.87■□□□□ 0.93
PTPN18-201ENST00000175756 NUDT16Q96DE0 195 aaKnown RBP20.87■□□□□ 0.93
PTPN18-201ENST00000175756 LMOD2Q6P5Q4 547 aa20.86■□□□□ 0.93
PTPN18-201ENST00000175756 RPAP2Q8IXW5 612 aaPredicted RBP20.86■□□□□ 0.93
PTPN18-201ENST00000175756 SBNO2Q9Y2G9 1366 aa20.86■□□□□ 0.93
PTPN18-201ENST00000175756 NPATQ14207 1427 aa20.85■□□□□ 0.93
PTPN18-201ENST00000175756 BCL11BQ9C0K0 894 aaPredicted RBP20.85■□□□□ 0.93
PTPN18-201ENST00000175756 CWC22Q9HCG8 908 aaKnown RBP20.85■□□□□ 0.93
PTPN18-201ENST00000175756 ABCC1P33527 1531 aa20.85■□□□□ 0.93
PTPN18-201ENST00000175756 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
PTPN18-201ENST00000175756 PPIP5K1Q6PFW1 1433 aa20.84■□□□□ 0.93
PTPN18-201ENST00000175756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.84■□□□□ 0.93
PTPN18-201ENST00000175756 CLASP1Q7Z460 1538 aa20.84■□□□□ 0.93
PTPN18-201ENST00000175756 TPM2P07951 284 aa20.84■□□□□ 0.93
PTPN18-201ENST00000175756 PKNOX2Q96KN3 472 aa20.84■□□□□ 0.93
PTPN18-201ENST00000175756 USP26Q9BXU7 913 aa20.84■□□□□ 0.93
PTPN18-201ENST00000175756 PLXNC1O60486 1568 aa20.84■□□□□ 0.93
PTPN18-201ENST00000175756 DCTPP1Q9H773 170 aa20.83■□□□□ 0.93
PTPN18-201ENST00000175756 RBSNQ9H1K0 784 aa20.83■□□□□ 0.93
PTPN18-201ENST00000175756 ASXL2Q76L83 1435 aa20.83■□□□□ 0.92
PTPN18-201ENST00000175756 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.92
PTPN18-201ENST00000175756 ZMYND15Q9H091 742 aa20.83■□□□□ 0.92
PTPN18-201ENST00000175756 LAMC1P11047 1609 aa20.82■□□□□ 0.92
PTPN18-201ENST00000175756 SURF6O75683 361 aaKnown RBP20.82■□□□□ 0.92
PTPN18-201ENST00000175756 GOLGA6L4A6NEF3 574 aa20.82■□□□□ 0.92
PTPN18-201ENST00000175756 GNAI2P04899 355 aa20.82■□□□□ 0.92
PTPN18-201ENST00000175756 DRC7Q8IY82 874 aa20.82■□□□□ 0.92
PTPN18-201ENST00000175756 ZNF692Q9BU19 519 aaPredicted RBP20.82■□□□□ 0.92
PTPN18-201ENST00000175756 FIBPO43427 364 aa20.82■□□□□ 0.92
PTPN18-201ENST00000175756 NUTM1Q86Y26 1132 aa20.82■□□□□ 0.92
PTPN18-201ENST00000175756 HSP90AB2PQ58FF8 381 aa20.81■□□□□ 0.92
PTPN18-201ENST00000175756 CCDC61Q9Y6R9 512 aa20.81■□□□□ 0.92
PTPN18-201ENST00000175756 ANKRD44Q8N8A2 993 aa20.81■□□□□ 0.92
PTPN18-201ENST00000175756 UQCRHLA0A096LP55 91 aa20.8■□□□□ 0.92
PTPN18-201ENST00000175756 UQCRHP07919 91 aa20.8■□□□□ 0.92
PTPN18-201ENST00000175756 LRRCC1Q9C099 1032 aa20.8■□□□□ 0.92
PTPN18-201ENST00000175756 FOXO3O43524 673 aa20.8■□□□□ 0.92
PTPN18-201ENST00000175756 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
PTPN18-201ENST00000175756 VPS37CA5D8V6 355 aaPredicted RBP20.8■□□□□ 0.92
PTPN18-201ENST00000175756 CEP85Q6P2H3 762 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms