RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CCDC61Q9Y6R9 512 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 ZFYVE9O95405 1425 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 METP08581 1390 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 USP32Q8NFA0 1604 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 RIMS2Q9UQ26 1411 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 PNPLA6Q8IY17 1366 aa10.37□□□□□ -0.75
CDC27-201ENST00000066544 C16orf71Q8IYS4 520 aaPredicted RBP10.36□□□□□ -0.75
CDC27-201ENST00000066544 NCBP3Q53F19 620 aaKnown RBP10.36□□□□□ -0.75
CDC27-201ENST00000066544 ALKQ9UM73 1620 aa10.36□□□□□ -0.75
CDC27-201ENST00000066544 PLEKHG5O94827 1062 aa10.36□□□□□ -0.75
CDC27-201ENST00000066544 ARHGEF40Q8TER5 1519 aa10.36□□□□□ -0.75
CDC27-201ENST00000066544 CALD1Q05682 793 aaKnown RBP10.36□□□□□ -0.75
CDC27-201ENST00000066544 SLC26A8Q96RN1 970 aa10.36□□□□□ -0.75
CDC27-201ENST00000066544 PANK2Q9BZ23 570 aa10.36□□□□□ -0.75
CDC27-201ENST00000066544 CD2BP2O95400 341 aaKnown RBP10.35□□□□□ -0.75
CDC27-201ENST00000066544 HSP90AB2PQ58FF8 381 aa10.35□□□□□ -0.75
CDC27-201ENST00000066544 TRAK2O60296 914 aa10.35□□□□□ -0.75
CDC27-201ENST00000066544 SLC4A10Q6U841 1118 aa10.35□□□□□ -0.75
CDC27-201ENST00000066544 TBC1D9Q6ZT07 1266 aa10.35□□□□□ -0.75
CDC27-201ENST00000066544 IFT57Q9NWB7 429 aa10.35□□□□□ -0.75
CDC27-201ENST00000066544 FAM135BQ49AJ0 1406 aa10.35□□□□□ -0.75
CDC27-201ENST00000066544 TMEM131LA2VDJ0 1609 aa10.35□□□□□ -0.75
CDC27-201ENST00000066544 SMARCA5O60264 1052 aaPredicted RBP10.34□□□□□ -0.75
CDC27-201ENST00000066544 OTUD7AQ8TE49 926 aaPredicted RBP10.34□□□□□ -0.75
CDC27-201ENST00000066544 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
CDC27-201ENST00000066544 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
CDC27-201ENST00000066544 PRR36Q9H6K5 1346 aa10.33□□□□□ -0.76
CDC27-201ENST00000066544 GOLGA6L3A6NEY3 463 aa10.33□□□□□ -0.76
CDC27-201ENST00000066544 FOXO3O43524 673 aa10.33□□□□□ -0.76
CDC27-201ENST00000066544 EIF4A2Q14240 407 aaKnown RBP10.33□□□□□ -0.76
CDC27-201ENST00000066544 BMP2KLQ5H9B9 411 aa10.33□□□□□ -0.76
CDC27-201ENST00000066544 API5Q9BZZ5 524 aaKnown RBP10.33□□□□□ -0.76
CDC27-201ENST00000066544 TSPOAP1O95153 1857 aa10.33□□□□□ -0.76
CDC27-201ENST00000066544 NUTM2GQ5VZR2 741 aa10.33□□□□□ -0.76
CDC27-201ENST00000066544 GCC1Q96CN9 775 aa10.33□□□□□ -0.76
CDC27-201ENST00000066544 PREX1Q8TCU6 1659 aa10.33□□□□□ -0.76
CDC27-201ENST00000066544 VIRMAQ69YN4 1812 aaKnown RBP10.33□□□□□ -0.76
CDC27-201ENST00000066544 LMOD3Q0VAK6 560 aa10.32□□□□□ -0.76
CDC27-201ENST00000066544 CEBPAP49715 358 aaPredicted RBP10.32□□□□□ -0.76
CDC27-201ENST00000066544 F6X3S4 739 aa10.32□□□□□ -0.76
CDC27-201ENST00000066544 XRCC6P12956 609 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDC27-201ENST00000066544 A2ML1A8K2U0 1454 aa10.32□□□□□ -0.76
CDC27-201ENST00000066544 ZNF853P0CG23 659 aa10.31□□□□□ -0.76
CDC27-201ENST00000066544 TNPO1Q92973 898 aaKnown RBP10.31□□□□□ -0.76
CDC27-201ENST00000066544 ZNF428Q96B54 188 aa10.31□□□□□ -0.76
CDC27-201ENST00000066544 MEIS3Q99687 375 aa10.31□□□□□ -0.76
CDC27-201ENST00000066544 LTV1Q96GA3 475 aaPredicted RBP10.31□□□□□ -0.76
CDC27-201ENST00000066544 RICTORQ6R327 1708 aa10.31□□□□□ -0.76
CDC27-201ENST00000066544 L1TD1Q5T7N2 865 aaKnown RBP10.31□□□□□ -0.76
CDC27-201ENST00000066544 ACEP12821 1306 aa10.3□□□□□ -0.76
CDC27-201ENST00000066544 SLC4A2P04920 1241 aa10.3□□□□□ -0.76
CDC27-201ENST00000066544 GSPT1P15170 499 aaKnown RBP10.3□□□□□ -0.76
CDC27-201ENST00000066544 CHMP4BQ9H444 224 aaKnown RBP10.3□□□□□ -0.76
CDC27-201ENST00000066544 ABCC4O15439 1325 aa10.3□□□□□ -0.76
CDC27-201ENST00000066544 RBM25P49756 843 aaKnown RBP10.3□□□□□ -0.76
CDC27-201ENST00000066544 ARHGAP45Q92619 1136 aa10.3□□□□□ -0.76
CDC27-201ENST00000066544 MAP2P11137 1827 aaKnown RBP10.3□□□□□ -0.76
CDC27-201ENST00000066544 MED14O60244 1454 aa10.3□□□□□ -0.76
CDC27-201ENST00000066544 EDC4Q6P2E9 1401 aaKnown RBP10.3□□□□□ -0.76
CDC27-201ENST00000066544 CPS1P31327 1500 aa10.3□□□□□ -0.76
CDC27-201ENST00000066544 ZMYM3Q14202 1370 aa10.3□□□□□ -0.76
CDC27-201ENST00000066544 TSHZ3Q63HK5 1081 aa10.3□□□□□ -0.76
CDC27-201ENST00000066544 KIF2CQ99661 725 aa10.29□□□□□ -0.76
CDC27-201ENST00000066544 CDC45O75419 566 aa10.29□□□□□ -0.76
CDC27-201ENST00000066544 C14orf37Q86TY3 774 aa10.29□□□□□ -0.76
CDC27-201ENST00000066544 PLEKHM2Q8IWE5 1019 aa10.29□□□□□ -0.76
CDC27-201ENST00000066544 GAS2L2Q8NHY3 880 aa10.29□□□□□ -0.76
CDC27-201ENST00000066544 TTC21BQ7Z4L5 1316 aa10.29□□□□□ -0.76
CDC27-201ENST00000066544 G2E3Q7L622 706 aa10.29□□□□□ -0.76
CDC27-201ENST00000066544 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDC27-201ENST00000066544 ZNF692Q9BU19 519 aaPredicted RBP10.29□□□□□ -0.76
CDC27-201ENST00000066544 SSFA2P28290 1259 aa10.29□□□□□ -0.76
CDC27-201ENST00000066544 RRAGDQ9NQL2 400 aaPredicted RBP10.28□□□□□ -0.76
CDC27-201ENST00000066544 ZBTB7CA1YPR0 619 aa10.28□□□□□ -0.76
CDC27-201ENST00000066544 NGDNQ8NEJ9 315 aaKnown RBP10.28□□□□□ -0.76
CDC27-201ENST00000066544 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
CDC27-201ENST00000066544 ATP7BP35670 1465 aa10.28□□□□□ -0.76
CDC27-201ENST00000066544 FOXD4L5Q5VV16 416 aaPredicted RBP10.27□□□□□ -0.76
CDC27-201ENST00000066544 FOXD4L4Q8WXT5 416 aaPredicted RBP10.27□□□□□ -0.76
CDC27-201ENST00000066544 RTF1Q92541 710 aaKnown RBP10.27□□□□□ -0.76
CDC27-201ENST00000066544 NCLP19338 710 aaKnown RBP10.27□□□□□ -0.77
CDC27-201ENST00000066544 AMPHP49418 695 aa10.27□□□□□ -0.77
CDC27-201ENST00000066544 ROBO2Q9HCK4 1378 aa10.27□□□□□ -0.77
CDC27-201ENST00000066544 CPSF1Q10570 1443 aaKnown RBP10.27□□□□□ -0.77
CDC27-201ENST00000066544 K7ELQ4 463 aaPredicted RBP10.27□□□□□ -0.77
CDC27-201ENST00000066544 EXOC6BQ9Y2D4 811 aa10.27□□□□□ -0.77
CDC27-201ENST00000066544 LTKP29376 864 aa10.27□□□□□ -0.77
CDC27-201ENST00000066544 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.77
CDC27-201ENST00000066544 NOL8Q76FK4 1167 aaKnown RBP10.27□□□□□ -0.77
CDC27-201ENST00000066544 DCTPP1Q9H773 170 aa10.27□□□□□ -0.77
CDC27-201ENST00000066544 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
CDC27-201ENST00000066544 PTCH1Q13635 1447 aa10.26□□□□□ -0.77
CDC27-201ENST00000066544 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
CDC27-201ENST00000066544 CEP85Q6P2H3 762 aa10.26□□□□□ -0.77
CDC27-201ENST00000066544 GBP4Q96PP9 640 aa10.26□□□□□ -0.77
CDC27-201ENST00000066544 MSH6P52701 1360 aa10.26□□□□□ -0.77
CDC27-201ENST00000066544 SDSP20132 328 aa10.25□□□□□ -0.77
CDC27-201ENST00000066544 MTHFSDQ2M296 383 aaKnown RBP10.25□□□□□ -0.77
CDC27-201ENST00000066544 SNX21Q969T3 373 aa10.25□□□□□ -0.77
CDC27-201ENST00000066544 RBM33Q96EV2 1170 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms