RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 ZNF428Q96B54 188 aa6.23□□□□□ -1.41
CDH17-201ENST00000027335 ZNF692Q9BU19 519 aaPredicted RBP6.23□□□□□ -1.41
CDH17-201ENST00000027335 RALGAPBQ86X10 1494 aa6.22□□□□□ -1.41
CDH17-201ENST00000027335 ZNF772Q68DY9 489 aaPredicted RBP6.22□□□□□ -1.41
CDH17-201ENST00000027335 SKAP1Q86WV1 359 aa6.22□□□□□ -1.41
CDH17-201ENST00000027335 COL22A1Q8NFW1 1626 aaPredicted RBP6.22□□□□□ -1.41
CDH17-201ENST00000027335 BBXQ8WY36 941 aaPredicted RBP6.22□□□□□ -1.41
CDH17-201ENST00000027335 SLKQ9H2G2 1235 aaPredicted RBP6.22□□□□□ -1.41
CDH17-201ENST00000027335 PRDM16Q9HAZ2 1276 aa6.22□□□□□ -1.41
CDH17-201ENST00000027335 SCAF11Q99590 1463 aaKnown RBP6.22□□□□□ -1.41
CDH17-201ENST00000027335 CCDC125Q86Z20 511 aa6.21□□□□□ -1.41
CDH17-201ENST00000027335 IPO9Q96P70 1041 aaKnown RBP6.21□□□□□ -1.41
CDH17-201ENST00000027335 PNNQ9H307 717 aaKnown RBP6.21□□□□□ -1.41
CDH17-201ENST00000027335 E9PSI1 815 aa6.21□□□□□ -1.42
CDH17-201ENST00000027335 HMOX1P09601 288 aa6.21□□□□□ -1.42
CDH17-201ENST00000027335 CHRM1P11229 460 aaPredicted RBP6.21□□□□□ -1.42
CDH17-201ENST00000027335 XPCQ01831 940 aaPredicted RBP6.21□□□□□ -1.42
CDH17-201ENST00000027335 FAM177A1Q8N128 213 aaPredicted RBP6.21□□□□□ -1.42
CDH17-201ENST00000027335 PANK1Q8TE04 598 aa6.21□□□□□ -1.42
CDH17-201ENST00000027335 CHD2O14647 1828 aaKnown RBP6.21□□□□□ -1.42
CDH17-201ENST00000027335 DCCP43146 1447 aa6.21□□□□□ -1.42
CDH17-201ENST00000027335 MCCP23508 829 aa6.2□□□□□ -1.42
CDH17-201ENST00000027335 ANKLE2Q86XL3 938 aa6.2□□□□□ -1.42
CDH17-201ENST00000027335 TCP11L2Q8N4U5 519 aa6.2□□□□□ -1.42
CDH17-201ENST00000027335 AMOTL2Q9Y2J4 779 aa6.2□□□□□ -1.42
CDH17-201ENST00000027335 CROCC2H7BZ55 1655 aa6.2□□□□□ -1.42
CDH17-201ENST00000027335 BCAR3O75815 825 aa6.2□□□□□ -1.42
CDH17-201ENST00000027335 MS4A1P11836 297 aa6.2□□□□□ -1.42
CDH17-201ENST00000027335 POTEAQ6S8J7 498 aa6.2□□□□□ -1.42
CDH17-201ENST00000027335 RTF1Q92541 710 aaKnown RBP6.2□□□□□ -1.42
CDH17-201ENST00000027335 LMTK2Q8IWU2 1503 aa6.2□□□□□ -1.42
CDH17-201ENST00000027335 RIPK4P57078 832 aa6.19□□□□□ -1.42
CDH17-201ENST00000027335 ANAPC15P60006 121 aa6.19□□□□□ -1.42
CDH17-201ENST00000027335 CARD14Q9BXL6 1004 aa6.19□□□□□ -1.42
CDH17-201ENST00000027335 RWDD1Q9H446 243 aaPredicted RBP6.19□□□□□ -1.42
CDH17-201ENST00000027335 SPATA31E1Q6ZUB1 1445 aa6.19□□□□□ -1.42
CDH17-201ENST00000027335 NSD3Q9BZ95 1437 aa6.19□□□□□ -1.42
CDH17-201ENST00000027335 IPO8O15397 1037 aaKnown RBP6.19□□□□□ -1.42
CDH17-201ENST00000027335 LTKP29376 864 aa6.19□□□□□ -1.42
CDH17-201ENST00000027335 NUDT16Q96DE0 195 aaKnown RBP6.19□□□□□ -1.42
CDH17-201ENST00000027335 COG3Q96JB2 828 aa6.19□□□□□ -1.42
CDH17-201ENST00000027335 ERVK-7P63135 1459 aa6.19□□□□□ -1.42
CDH17-201ENST00000027335 MFAP1P55081 439 aaKnown RBP6.19□□□□□ -1.42
CDH17-201ENST00000027335 RRS1Q15050 365 aaKnown RBP6.19□□□□□ -1.42
CDH17-201ENST00000027335 DIAPH1O60610 1272 aaKnown RBP6.18□□□□□ -1.42
CDH17-201ENST00000027335 SLC4A10Q6U841 1118 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 RUNDC1Q96C34 613 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 ZRANB1Q9UGI0 708 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 MTMR7Q9Y216 660 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 RIMS2Q9UQ26 1411 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 PER1O15534 1290 aaPredicted RBP6.18□□□□□ -1.42
CDH17-201ENST00000027335 AMPHP49418 695 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 OS9Q13438 667 aaPredicted RBP6.18□□□□□ -1.42
CDH17-201ENST00000027335 GRIPAP1Q4V328 841 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 ESCO1Q5FWF5 840 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 PROSER2Q86WR7 435 aaPredicted RBP6.18□□□□□ -1.42
CDH17-201ENST00000027335 NME9Q86XW9 330 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 DSG3P32926 999 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 C20orf194Q5TEA3 1177 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 FOXD4L5Q5VV16 416 aaPredicted RBP6.18□□□□□ -1.42
CDH17-201ENST00000027335 CENPQQ7L2Z9 268 aaPredicted RBP6.18□□□□□ -1.42
CDH17-201ENST00000027335 GPATCH11Q8N954 259 aa6.18□□□□□ -1.42
CDH17-201ENST00000027335 FOXD4L4Q8WXT5 416 aaPredicted RBP6.18□□□□□ -1.42
CDH17-201ENST00000027335 TSR2Q969E8 191 aaKnown RBP6.18□□□□□ -1.42
CDH17-201ENST00000027335 MARF1Q9Y4F3 1742 aaKnown RBP6.17□□□□□ -1.42
CDH17-201ENST00000027335 PATL2C9JE40 543 aaKnown RBP6.17□□□□□ -1.42
CDH17-201ENST00000027335 NLRP6P59044 892 aa6.17□□□□□ -1.42
CDH17-201ENST00000027335 PSME1Q06323 249 aa6.17□□□□□ -1.42
CDH17-201ENST00000027335 CCDC27Q2M243 656 aa6.17□□□□□ -1.42
CDH17-201ENST00000027335 LRP6O75581 1613 aa6.17□□□□□ -1.42
CDH17-201ENST00000027335 FAM193AP78312 1265 aa6.17□□□□□ -1.42
CDH17-201ENST00000027335 ZKSCAN2Q63HK3 967 aa6.17□□□□□ -1.42
CDH17-201ENST00000027335 CCDC61Q9Y6R9 512 aa6.17□□□□□ -1.42
CDH17-201ENST00000027335 WASLO00401 505 aaPredicted RBP6.16□□□□□ -1.42
CDH17-201ENST00000027335 ATAD2Q6PL18 1390 aa6.16□□□□□ -1.42
CDH17-201ENST00000027335 FANCIQ9NVI1 1328 aa6.16□□□□□ -1.42
CDH17-201ENST00000027335 HSP90AB1P08238 724 aaKnown RBP6.16□□□□□ -1.42
CDH17-201ENST00000027335 PIK3R4Q99570 1358 aa6.16□□□□□ -1.42
CDH17-201ENST00000027335 KCNA6P17658 529 aa6.15□□□□□ -1.42
CDH17-201ENST00000027335 DNAJC2Q99543 621 aaKnown RBP6.15□□□□□ -1.42
CDH17-201ENST00000027335 FOXD4L1Q9NU39 408 aa6.15□□□□□ -1.42
CDH17-201ENST00000027335 PLEKHH1Q9ULM0 1364 aa6.15□□□□□ -1.42
CDH17-201ENST00000027335 SMG6Q86US8 1419 aaKnown RBP6.15□□□□□ -1.42
CDH17-201ENST00000027335 FAM161AQ3B820 660 aa6.15□□□□□ -1.42
CDH17-201ENST00000027335 ABTB2Q8N961 1025 aa6.15□□□□□ -1.42
CDH17-201ENST00000027335 GZF1Q9H116 711 aaPredicted RBP6.15□□□□□ -1.42
CDH17-201ENST00000027335 EMILIN1Q9Y6C2 1016 aa6.15□□□□□ -1.42
CDH17-201ENST00000027335 IQGAP3Q86VI3 1631 aa6.15□□□□□ -1.43
CDH17-201ENST00000027335 FOXO3O43524 673 aa6.15□□□□□ -1.43
CDH17-201ENST00000027335 EXOSC9Q06265 439 aaKnown RBP6.15□□□□□ -1.43
CDH17-201ENST00000027335 FAM43BQ6ZT52 329 aaPredicted RBP6.15□□□□□ -1.43
CDH17-201ENST00000027335 CLTCL1P53675 1640 aa6.15□□□□□ -1.43
CDH17-201ENST00000027335 CALD1Q05682 793 aaKnown RBP6.14□□□□□ -1.43
CDH17-201ENST00000027335 DZIP1LQ8IYY4 767 aaKnown RBP6.14□□□□□ -1.43
CDH17-201ENST00000027335 E9PCH4 1651 aa6.14□□□□□ -1.43
CDH17-201ENST00000027335 PRKAR2BP31323 418 aa6.14□□□□□ -1.43
CDH17-201ENST00000027335 ANKRD45Q5TZF3 282 aa6.14□□□□□ -1.43
CDH17-201ENST00000027335 ANP32BQ92688 251 aaKnown RBP6.14□□□□□ -1.43
CDH17-201ENST00000027335 TRPM2O94759 1503 aa6.14□□□□□ -1.43
CDH17-201ENST00000027335 PTCH1Q13635 1447 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms