RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Kcnh5Q920E3 988 aa20.27■□□□□ 0.83
Ubp1-206ENSMUST00000216558 MpripP97434 1024 aa20.26■□□□□ 0.83
Ubp1-206ENSMUST00000216558 Stk31Q99MW1 1018 aa20.26■□□□□ 0.83
Ubp1-206ENSMUST00000216558 Mcm10Q0VBD2 885 aa20.25■□□□□ 0.83
Ubp1-206ENSMUST00000216558 1700123L14RikQ3V2K7 440 aa20.25■□□□□ 0.83
Ubp1-206ENSMUST00000216558 TnikP83510 1323 aa20.24■□□□□ 0.83
Ubp1-206ENSMUST00000216558 Cabp2Q9JLK4 216 aa20.24■□□□□ 0.83
Ubp1-206ENSMUST00000216558 DccP70211 1447 aa20.23■□□□□ 0.83
Ubp1-206ENSMUST00000216558 Gli3Q61602 1583 aa20.23■□□□□ 0.83
Ubp1-206ENSMUST00000216558 NeflP08551 543 aa20.23■□□□□ 0.83
Ubp1-206ENSMUST00000216558 Eya1P97767 591 aa20.23■□□□□ 0.83
Ubp1-206ENSMUST00000216558 Prkrip1Q9CWV6 186 aaKnown RBP20.22■□□□□ 0.83
Ubp1-206ENSMUST00000216558 NudcO35685 332 aaKnown RBP20.21■□□□□ 0.83
Ubp1-206ENSMUST00000216558 CastP51125 788 aa20.21■□□□□ 0.83
Ubp1-206ENSMUST00000216558 Ccne1Q61457 408 aa20.21■□□□□ 0.83
Ubp1-206ENSMUST00000216558 Trpm3Q5F4S9 1721 aa20.2■□□□□ 0.83
Ubp1-206ENSMUST00000216558 Tet3Q8BG87 1668 aa20.2■□□□□ 0.83
Ubp1-206ENSMUST00000216558 GnpatP98192 678 aa20.2■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Rbm25B2RY56 838 aaKnown RBP20.2■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Rab11fip3Q8CHD8 1047 aa20.2■□□□□ 0.82
Ubp1-206ENSMUST00000216558 TatQ8QZR1 454 aa20.2■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Fmnl2A2APV2 1086 aa20.18■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Gnai1B2RSH2 354 aa20.18■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Wdr43Q6ZQL4 677 aaKnown RBP20.18■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Gnai3Q9DC51 354 aa20.18■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Kcnh8P59111 1102 aa20.17■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Tmem132eQ6IEE6 982 aa20.17■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Ccdc171E9Q1U1 1324 aa20.17■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Gm38655A0A286YDK6 273 aa20.16■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Brinp3Q499E0 766 aa20.16■□□□□ 0.82
Ubp1-206ENSMUST00000216558 TmpoQ61033 693 aaKnown RBP20.16■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Zmym3Q9JLM4 1370 aa20.16■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Dzip1Q8BMD2 852 aa20.16■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Cdc37l1Q9CZP7 335 aa20.16■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Kdm6aO70546 1401 aa20.16■□□□□ 0.82
Ubp1-206ENSMUST00000216558 TnrQ8BYI9 1358 aa20.15■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Trim58Q5NCC9 485 aa20.15■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Dixdc1Q80Y83 711 aa20.15■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Dnajc10Q9DC23 793 aa20.15■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Apbb1Q9QXJ1 710 aa20.15■□□□□ 0.82
Ubp1-206ENSMUST00000216558 Plin1Q8CGN5 517 aa20.14■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Arfgef2A2A5R2 1792 aa20.14■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Sos1Q62245 1319 aa20.14■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Bcl9lQ67FY2 1494 aa20.12■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Ecm2Q5FW85 670 aa20.12■□□□□ 0.81
Ubp1-206ENSMUST00000216558 HypkQ9CR41 129 aa20.12■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Abca15E9PWH4 1668 aa20.12■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Znf521Q6KAS7 1311 aa20.11■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Cyb5rlB1AS42 316 aa20.11■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Gsdma3Q5Y4Y6 464 aa20.11■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Ppp4r2Q0VGB7 417 aa20.1■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Ddx17Q501J6 650 aaKnown RBP20.1■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Ahnak2E9PYB0 1738 aaKnown RBP20.1■□□□□ 0.81
Ubp1-206ENSMUST00000216558 AampJ3QN89 436 aa20.09■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Polr3glQ8R0C0 218 aa20.09■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Anp32aO35381 247 aa20.09■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Trim26Q99PN3 545 aa20.09■□□□□ 0.81
Ubp1-206ENSMUST00000216558 Vamp4O70480 141 aa20.08■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Ccdc60Q8C4J0 545 aa20.08■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Nid2O88322 1403 aa20.08■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Nol11Q8BJW5 723 aaKnown RBP20.07■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Pank1Q8K4K6 548 aa20.07■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Atp10bB1AWN4 1474 aa20.07■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Usp16Q99LG0 825 aa20.05■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Rtf1A2AQ19 715 aaKnown RBP20.05■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Card10P58660 1021 aa20.05■□□□□ 0.8
Ubp1-206ENSMUST00000216558 G3bp1P97855 465 aaKnown RBP20.05■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Amotl1Q9D4H4 968 aa20.05■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Myo5bP21271 1818 aa20.04■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Kdm2bQ6P1G2 1309 aa20.04■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Kif24Q6NWW5 1356 aa20.04■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Nup153E9Q3G8 1462 aaKnown RBP20.03■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Adgrb1Q3UHD1 1582 aa20.03■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Cavin2Q63918 418 aaKnown RBP20.03■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Amotl2Q8K371 772 aa20.03■□□□□ 0.8
Ubp1-206ENSMUST00000216558 CenpbP27790 599 aa20.02■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Cadps2Q8BYR5 1297 aa20.02■□□□□ 0.8
Ubp1-206ENSMUST00000216558 Gm21698A0A087WQP8 267 aa20.02■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Gm21671G3UY31 267 aa20.02■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Tspyl2Q7TQI8 677 aa20.02■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Plekhm2Q80TQ5 1018 aa20.02■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Ppp1r37Q8BKR5 712 aa20.02■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Simc1E9Q6E9 1354 aa20.02■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.01■□□□□ 0.79
Ubp1-206ENSMUST00000216558 KarsQ99MN1 595 aaKnown RBP20.01■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Col15a1O35206 1367 aa20■□□□□ 0.79
Ubp1-206ENSMUST00000216558 TkfcQ8VC30 578 aa20■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Klhdc4Q921I2 584 aa20■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Nolc1E9Q5C9 702 aaKnown RBP19.99■□□□□ 0.79
Ubp1-206ENSMUST00000216558 U2surpQ6NV83 1029 aaKnown RBP19.99■□□□□ 0.79
Ubp1-206ENSMUST00000216558 FocadA2AKG8 1798 aa19.99■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Igsf1Q7TQA1 1317 aa19.99■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Gm6268A2A3U9 297 aa19.98■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Nsd3Q6P2L6 1439 aa19.98■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Snap23O09044 210 aa19.97■□□□□ 0.79
Ubp1-206ENSMUST00000216558 OptnQ8K3K8 584 aa19.97■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Abcc12Q80WJ6 1366 aa19.96■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Marf1Q8BJ34 1730 aaKnown RBP19.96■□□□□ 0.79
Ubp1-206ENSMUST00000216558 ZgpatQ8VDM1 511 aa19.96■□□□□ 0.79
Ubp1-206ENSMUST00000216558 Supt16hQ920B9 1047 aa19.96■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms