RNA–Protein interactions for RNA: ENSMUST00000200038.1

Chfr-212, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

TSL 1 (best) BASIC

Gene Chfr, Length 606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-212ENSMUST00000200038 Cacna1sQ02789 1880 aa17.9■□□□□ 0.46
Chfr-212ENSMUST00000200038 Hoxb7P09024 217 aa17.89■□□□□ 0.45
Chfr-212ENSMUST00000200038 Cc2d1aQ8K1A6 943 aa17.89■□□□□ 0.45
Chfr-212ENSMUST00000200038 Sik1Q60670 779 aa17.88■□□□□ 0.45
Chfr-212ENSMUST00000200038 Adamtsl1Q8BLI0 1745 aa17.88■□□□□ 0.45
Chfr-212ENSMUST00000200038 FancaQ9JL70 1439 aa17.88■□□□□ 0.45
Chfr-212ENSMUST00000200038 Ppfibp2O35711 882 aa17.87■□□□□ 0.45
Chfr-212ENSMUST00000200038 Hoxc9P09633 260 aa17.87■□□□□ 0.45
Chfr-212ENSMUST00000200038 Sin3aQ60520 1274 aaKnown RBP17.87■□□□□ 0.45
Chfr-212ENSMUST00000200038 Rad17Q6NXW6 688 aa17.87■□□□□ 0.45
Chfr-212ENSMUST00000200038 Mst1rQ62190 1378 aa17.87■□□□□ 0.45
Chfr-212ENSMUST00000200038 Pank3Q8R2W9 370 aa17.86■□□□□ 0.45
Chfr-212ENSMUST00000200038 Robo1O89026 1612 aa17.86■□□□□ 0.45
Chfr-212ENSMUST00000200038 Vars2Q3U2A8 1060 aa17.85■□□□□ 0.45
Chfr-212ENSMUST00000200038 Lrit1Q8K099 624 aa17.85■□□□□ 0.45
Chfr-212ENSMUST00000200038 Dcaf11Q91VU6 549 aa17.85■□□□□ 0.45
Chfr-212ENSMUST00000200038 GakQ99KY4 1305 aa17.85■□□□□ 0.45
Chfr-212ENSMUST00000200038 IbtkQ6ZPR6 1352 aaKnown RBP17.84■□□□□ 0.45
Chfr-212ENSMUST00000200038 Fer1l6E0CZ42 1862 aa17.82■□□□□ 0.44
Chfr-212ENSMUST00000200038 Gm10471E9Q1C7 252 aa17.82■□□□□ 0.44
Chfr-212ENSMUST00000200038 Slit1Q80TR4 1531 aa17.82■□□□□ 0.44
Chfr-212ENSMUST00000200038 Elp1Q7TT37 1333 aaKnown RBP17.81■□□□□ 0.44
Chfr-212ENSMUST00000200038 Kcnh4A2A5F7 1018 aa17.81■□□□□ 0.44
Chfr-212ENSMUST00000200038 Ccne1Q61457 408 aa17.81■□□□□ 0.44
Chfr-212ENSMUST00000200038 Inpp5dQ9ES52 1191 aa17.81■□□□□ 0.44
Chfr-212ENSMUST00000200038 ClspnQ80YR7 1315 aa17.8■□□□□ 0.44
Chfr-212ENSMUST00000200038 PrxO55103 1391 aa17.79■□□□□ 0.44
Chfr-212ENSMUST00000200038 Las1lA2BE28 776 aaKnown RBP17.79■□□□□ 0.44
Chfr-212ENSMUST00000200038 Hmgb2P30681 210 aaKnown RBP17.79■□□□□ 0.44
Chfr-212ENSMUST00000200038 Aplp2Q06335 707 aa17.79■□□□□ 0.44
Chfr-212ENSMUST00000200038 Ezh2Q61188 746 aaKnown RBP17.79■□□□□ 0.44
Chfr-212ENSMUST00000200038 Nsd3Q6P2L6 1439 aa17.79■□□□□ 0.44
Chfr-212ENSMUST00000200038 Pim2Q62070 370 aa17.77■□□□□ 0.44
Chfr-212ENSMUST00000200038 Bsdc1Q80Y55 427 aa17.77■□□□□ 0.44
Chfr-212ENSMUST00000200038 Fam50bQ9WTJ8 334 aa17.77■□□□□ 0.44
Chfr-212ENSMUST00000200038 Col15a1O35206 1367 aa17.77■□□□□ 0.43
Chfr-212ENSMUST00000200038 Ly75Q60767 1723 aa17.76■□□□□ 0.43
Chfr-212ENSMUST00000200038 Gm21680A0A0G2JGR8 267 aa17.76■□□□□ 0.43
Chfr-212ENSMUST00000200038 Q8BT18 775 aa17.76■□□□□ 0.43
Chfr-212ENSMUST00000200038 Afg3l2Q8JZQ2 802 aaKnown RBP17.76■□□□□ 0.43
Chfr-212ENSMUST00000200038 Rab3gap2Q8BMG7 1366 aa17.76■□□□□ 0.43
Chfr-212ENSMUST00000200038 Snapc4Q8BP86 1333 aa17.75■□□□□ 0.43
Chfr-212ENSMUST00000200038 4930572O03RikQ8C5Y0 211 aa17.75■□□□□ 0.43
Chfr-212ENSMUST00000200038 Ciz1Q8VEH2 845 aa17.75■□□□□ 0.43
Chfr-212ENSMUST00000200038 Arhgap33Q80YF9 1305 aa17.74■□□□□ 0.43
Chfr-212ENSMUST00000200038 Ankrd13dQ6PD24 605 aa17.73■□□□□ 0.43
Chfr-212ENSMUST00000200038 Zscan10Q3URR7 782 aa17.72■□□□□ 0.43
Chfr-212ENSMUST00000200038 Speer4bQ9D9F7 267 aa17.72■□□□□ 0.43
Chfr-212ENSMUST00000200038 PnisrA2AJT4 805 aaKnown RBP17.71■□□□□ 0.43
Chfr-212ENSMUST00000200038 Mast2Q60592 1734 aa17.7■□□□□ 0.42
Chfr-212ENSMUST00000200038 Nwd2Q6P5U7 1742 aa17.7■□□□□ 0.42
Chfr-212ENSMUST00000200038 Zfp777B9EKF4 885 aa17.7■□□□□ 0.42
Chfr-212ENSMUST00000200038 Ccdc85cE9Q6B2 420 aa17.7■□□□□ 0.42
Chfr-212ENSMUST00000200038 ThemisQ8BGW0 636 aa17.7■□□□□ 0.42
Chfr-212ENSMUST00000200038 Ubr1O70481 1757 aa17.7■□□□□ 0.42
Chfr-212ENSMUST00000200038 Erbb3Q61526 1339 aa17.7■□□□□ 0.42
Chfr-212ENSMUST00000200038 Gpr150Q8BL07 427 aa17.69■□□□□ 0.42
Chfr-212ENSMUST00000200038 Plekhg5Q66T02 1073 aa17.68■□□□□ 0.42
Chfr-212ENSMUST00000200038 Chd4Q6PDQ2 1915 aaKnown RBP17.68■□□□□ 0.42
Chfr-212ENSMUST00000200038 Smg6P61406 1418 aaKnown RBP17.67■□□□□ 0.42
Chfr-212ENSMUST00000200038 Gprasp1Q5U4C1 1347 aa17.67■□□□□ 0.42
Chfr-212ENSMUST00000200038 Rps6ka4Q9Z2B9 773 aa17.66■□□□□ 0.42
Chfr-212ENSMUST00000200038 Akap11E9Q777 1895 aa17.66■□□□□ 0.42
Chfr-212ENSMUST00000200038 Simc1E9Q6E9 1354 aa17.66■□□□□ 0.42
Chfr-212ENSMUST00000200038 Kdm6aO70546 1401 aa17.65■□□□□ 0.42
Chfr-212ENSMUST00000200038 En2P09066 324 aa17.65■□□□□ 0.42
Chfr-212ENSMUST00000200038 Eya1P97767 591 aa17.65■□□□□ 0.42
Chfr-212ENSMUST00000200038 Kat6bQ8BRB7 1872 aa17.65■□□□□ 0.42
Chfr-212ENSMUST00000200038 Eif4a2P10630 407 aa17.64■□□□□ 0.41
Chfr-212ENSMUST00000200038 Ppp1r37Q8BKR5 712 aa17.64■□□□□ 0.41
Chfr-212ENSMUST00000200038 ApobrQ8VBT6 942 aa17.64■□□□□ 0.41
Chfr-212ENSMUST00000200038 Mdc1Q5PSV9 1707 aa17.64■□□□□ 0.41
Chfr-212ENSMUST00000200038 Magea1O89006 320 aa17.63■□□□□ 0.41
Chfr-212ENSMUST00000200038 Magea5O89009 320 aa17.63■□□□□ 0.41
Chfr-212ENSMUST00000200038 Ppp1r15aP17564 657 aa17.63■□□□□ 0.41
Chfr-212ENSMUST00000200038 PsdQ5DTT2 1024 aa17.63■□□□□ 0.41
Chfr-212ENSMUST00000200038 Magea2Q9R2A2 320 aa17.63■□□□□ 0.41
Chfr-212ENSMUST00000200038 Scn7aB1AYL1 1681 aa17.63■□□□□ 0.41
Chfr-212ENSMUST00000200038 Sos2Q02384 1333 aa17.63■□□□□ 0.41
Chfr-212ENSMUST00000200038 Pnpla7A2AJ88 1352 aa17.63■□□□□ 0.41
Chfr-212ENSMUST00000200038 Kif23E9Q5G3 953 aa17.62■□□□□ 0.41
Chfr-212ENSMUST00000200038 Cald1E9QA15 768 aaKnown RBP17.62■□□□□ 0.41
Chfr-212ENSMUST00000200038 Eif3bQ8JZQ9 803 aaKnown RBP17.62■□□□□ 0.41
Chfr-212ENSMUST00000200038 Klc3Q91W40 508 aa17.62■□□□□ 0.41
Chfr-212ENSMUST00000200038 VirmaA2AIV2 1811 aaKnown RBP17.62■□□□□ 0.41
Chfr-212ENSMUST00000200038 Gsdma3Q5Y4Y6 464 aa17.61■□□□□ 0.41
Chfr-212ENSMUST00000200038 Trim28Q62318 834 aa17.6■□□□□ 0.41
Chfr-212ENSMUST00000200038 Kiaa0319lQ8K135 1048 aa17.6■□□□□ 0.41
Chfr-212ENSMUST00000200038 Map2P20357 1828 aa17.59■□□□□ 0.41
Chfr-212ENSMUST00000200038 MpripP97434 1024 aa17.59■□□□□ 0.41
Chfr-212ENSMUST00000200038 Ptpn23Q6PB44 1692 aa17.58■□□□□ 0.41
Chfr-212ENSMUST00000200038 Gm21663A0A0G2JE01 267 aa17.58■□□□□ 0.4
Chfr-212ENSMUST00000200038 Gm7361D3Z6R1 267 aa17.58■□□□□ 0.4
Chfr-212ENSMUST00000200038 5031410I06RikE9Q4E0 267 aa17.58■□□□□ 0.4
Chfr-212ENSMUST00000200038 Gm1979E9QAN3 267 aa17.58■□□□□ 0.4
Chfr-212ENSMUST00000200038 Gm5862K7N5V5 267 aa17.58■□□□□ 0.4
Chfr-212ENSMUST00000200038 Gm10220K7N660 267 aa17.58■□□□□ 0.4
Chfr-212ENSMUST00000200038 Ccnl1Q52KE7 532 aaKnown RBP17.57■□□□□ 0.4
Chfr-212ENSMUST00000200038 Rsph6aQ8CDR2 708 aa17.57■□□□□ 0.4
Chfr-212ENSMUST00000200038 Larp1Q6ZQ58 1072 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms