RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Ric3Q8BPM6 367 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Pnma3Q8JZW8 466 aa9.28□□□□□ -0.92
Bdnf-211ENSMUST00000176893 WrnO09053 1401 aa9.27□□□□□ -0.92
Bdnf-211ENSMUST00000176893 Polr3gQ6NXY9 223 aa9.27□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Lmbrd2Q8C561 694 aa9.27□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Arih1Q9Z1K5 555 aa9.27□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Mctp2Q5RJH2 878 aa9.27□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Foxd1Q61345 456 aa9.27□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Tnpo1Q8BFY9 898 aaKnown RBP9.27□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Usp33Q8R5K2 909 aa9.27□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Ythdc2B2RR83 1445 aaKnown RBP9.26□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Lmo7E9PYF4 1699 aaKnown RBP9.26□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Taf3Q5HZG4 932 aa9.26□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Snd1Q78PY7 910 aaKnown RBP9.26□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Gm973E9Q295 1059 aa9.26□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Ice2Q3UZ18 988 aaKnown RBP9.26□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Gm14025A2AP89 1413 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Catsper2A2ARP9 588 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Neo1P97798 1493 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Chpf2Q3UU43 768 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 4930523C07RikE9Q2T4 99 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Gzf1Q4VBD9 706 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Dcaf11Q91VU6 549 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Nol7Q9D7Z3 254 aaKnown RBP9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Dydc1Q9D9T0 175 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Ca8P28651 291 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 NppbP40753 121 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 GorabQ8BRM2 368 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Ccdc38Q8CDN8 563 aa9.25□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Mapk8ip3Q9ESN9 1337 aa9.24□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Rad51ap2G3UW63 976 aa9.24□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Zfp251Q6PCX8 632 aa9.24□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Q8BZJ8 459 aa9.24□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Zmynd15Q8C0R7 736 aa9.24□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Rpgrip1lQ8CG73 1264 aa9.24□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Lonrf3Q9D4H7 753 aa9.24□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Prdm4Q80V63 803 aa9.24□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Nap1l1P28656 391 aaKnown RBP9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Spty2d1Q68FG3 682 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Ano8Q6PB70 1060 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Lamc3Q9R0B6 1581 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Rbm46P86049 533 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Rps6ka5Q8C050 863 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Tma7Q8K003 64 aaKnown RBP9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 NptxrQ99J85 493 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 4933428M09RikQ9D3X3 192 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 A2mQ6GQT1 1474 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Lamc1P02468 1607 aaKnown RBP9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Plekhd1B2RPU2 505 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Ferd3lQ923Z4 168 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Trim66Q924W6 1242 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Zcrb1Q9CZ96 217 aaKnown RBP9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Znf335A2A5K6 1337 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Grin2bQ01097 1482 aa9.23□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Trim55G3X8Y1 545 aa9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Nub1P54729 614 aa9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Grpel1Q99LP6 217 aa9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Zmym4A2A791 1549 aaKnown RBP9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Gm7347D3YYI9 267 aa9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Atp2b3Q0VF55 1220 aa9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 GlmnQ8BZM1 596 aa9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Pank3Q8R2W9 370 aa9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Ppp1r12aQ9DBR7 1029 aaKnown RBP9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Shroom4Q1W617 1475 aa9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Rprd2Q6NXI6 1469 aaKnown RBP9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Cc2d2bA0A286YDU8 1405 aa9.22□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Nectin2P32507 530 aa9.21□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Iqca1Q9CUL5 857 aa9.21□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Brd1E9PZ26 1189 aaKnown RBP9.21□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Stk26Q99JT2 416 aa9.21□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Chaf1aQ9QWF0 911 aa9.21□□□□□ -0.93
Bdnf-211ENSMUST00000176893 Gapvd1Q6PAR5 1458 aa9.21□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Q3TQI7 289 aaKnown RBP9.21□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Arglu1Q3UL36 271 aaKnown RBP9.21□□□□□ -0.94
Bdnf-211ENSMUST00000176893 L1td1Q587J6 782 aaKnown RBP9.21□□□□□ -0.94
Bdnf-211ENSMUST00000176893 GapdhsQ64467 440 aa9.21□□□□□ -0.94
Bdnf-211ENSMUST00000176893 A0A1W2P7S8 802 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 U2af2P26369 475 aaKnown RBP9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Cdkn1cP49919 348 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Pank2Q3U4S0 443 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Fbxw10Q5SUS0 1030 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Arhgef1Q61210 920 aaKnown RBP9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Gm7298A0A0N4SVU1 1476 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Usp47Q8BY87 1376 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Psen1P49769 467 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Ctr9Q62018 1173 aaKnown RBP9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Galntl5Q9D4M9 431 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Fbln2P37889 1221 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Apba2P98084 750 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Rsph3aQ3UFY4 516 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Col4a3bpQ9EQG9 624 aa9.2□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Strn4P58404 760 aa9.19□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Znf513Q6PD29 541 aa9.19□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Suds3Q8BR65 328 aa9.19□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Tmx4Q8C0L0 335 aa9.19□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Tubgcp6G5E8P0 1769 aa9.19□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Mbd5B1AYB6 1498 aa9.19□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Naip6Q9JIB6 1403 aa9.19□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Rabep1O35551 862 aa9.19□□□□□ -0.94
Bdnf-211ENSMUST00000176893 Vti1aO89116 217 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms