RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Exoc6bA6H5Z3 810 aa18.45■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Prl7d1P04769 244 aa18.45■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Cfap58B2RW38 873 aa18.45■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Map3k13Q1HKZ5 959 aa18.45■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Phldb2Q8K1N2 1249 aa18.45■□□□□ 0.54
Ubr2-201ENSMUST00000113335 PalmQ9Z0P4 383 aa18.45■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Erlin2Q8BFZ9 340 aa18.45■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Tspyl2Q7TQI8 677 aa18.45■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Cdc45Q9Z1X9 566 aa18.45■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Gnl2Q99LH1 728 aaKnown RBP18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Bcl11bQ99PV8 884 aa18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 CenpqQ9CPQ5 267 aa18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Stim1P70302 685 aa18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Ptpdc1Q6NZK8 747 aa18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Maco1Q7TQE6 664 aaKnown RBP18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Kdm4aQ8BW72 1064 aa18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Pabpn1Q8CCS6 302 aaKnown RBP18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Slu7Q8BHJ9 585 aa18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Cdk19Q8BWD8 501 aa18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Gps2Q921N8 327 aa18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 BbxQ8VBW5 907 aa18.44■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Ppip5k2Q6ZQB6 1129 aa18.43■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Ccdc181Q80ZU5 509 aa18.43■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Rhot2Q8JZN7 620 aa18.43■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Ppp6r1Q7TSI3 856 aa18.43■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Trim55G3X8Y1 545 aa18.43■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Dennd6aQ8BH65 605 aa18.43■□□□□ 0.54
Ubr2-201ENSMUST00000113335 IkQ9Z1M8 557 aaKnown RBP18.42■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Dnajc2P54103 621 aaKnown RBP18.42■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Otud6bQ8K2H2 294 aa18.42■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Cc2d2aQ8CFW7 1633 aa18.41■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Fam184aE9PW83 1143 aa18.41■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Spty2d1Q68FG3 682 aa18.41■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Luc7lQ9CYI4 371 aaKnown RBP18.41■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Pms1Q8K119 917 aa18.41■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Gigyf1Q99MR1 1044 aaKnown RBP18.41■□□□□ 0.54
Ubr2-201ENSMUST00000113335 Fsd2Q8BZ52 692 aa18.39■□□□□ 0.54
Ubr2-201ENSMUST00000113335 L3mbtl2P59178 703 aa18.39■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Gbp4Q61107 620 aa18.39■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Spag5Q7TME2 1165 aa18.39■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Klf15Q9EPW2 415 aa18.39■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Ttc19Q8CC21 365 aa18.38■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Arhgef5E9Q7D5 1581 aa18.38■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Irgm2A0A140LIF8 407 aa18.38■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Kif20aP97329 887 aa18.38■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Pof1bQ8K4L4 587 aa18.38■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Zscan20B2KFW1 1030 aa18.38■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Cdkl5Q3UTQ8 938 aa18.38■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Trim25Q61510 634 aaKnown RBP18.37■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Map9Q3TRR0 646 aa18.37■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Smarca5Q91ZW3 1051 aaKnown RBP18.37■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Pip4k2bQ80XI4 416 aa18.37■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Arap1Q4LDD4 1452 aa18.37■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Fam13aQ8BGI4 693 aa18.37■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Rufy2Q8R4C2 606 aa18.37■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Cyp26c1B2RXA7 518 aa18.36■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Fchsd2Q3USJ8 740 aa18.36■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Rnf187Q8BFX1 236 aa18.36■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Brf1Q8CFK2 676 aa18.36■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Cbx1P83917 185 aaKnown RBP18.36■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Efcab5A0JP43 1406 aa18.36■□□□□ 0.53
Ubr2-201ENSMUST00000113335 MicalclQ9D5U9 680 aa18.36■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Cfap45Q9D9U9 551 aa18.36■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Ssr1Q9CY50 286 aaKnown RBP18.36■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Lrrc45Q8CIM1 670 aa18.35■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Iqca1Q9CUL5 857 aa18.35■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Gm21698A0A087WQP8 267 aa18.35■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Gm21671G3UY31 267 aa18.35■□□□□ 0.53
Ubr2-201ENSMUST00000113335 TimelessQ9R1X4 1197 aa18.35■□□□□ 0.53
Ubr2-201ENSMUST00000113335 PrxO55103 1391 aa18.35■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Arhgap31A6X8Z5 1425 aa18.35■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Ppm1eQ80TL0 749 aa18.35■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Dnaaf4Q8R368 420 aa18.34■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Pafah1b1P63005 410 aaKnown RBP18.34■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Ercc6lQ8BHK9 1240 aa18.34■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Krt84Q99M73 603 aa18.34■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Jakmip2D3YXK0 820 aa18.34■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Adck5Q80V03 582 aa18.34■□□□□ 0.53
Ubr2-201ENSMUST00000113335 NcapgE9PWG6 1004 aa18.34■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Wdr33Q8K4P0 1330 aaKnown RBP18.34■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Speer4bQ9D9F7 267 aa18.34■□□□□ 0.53
Ubr2-201ENSMUST00000113335 Evi5lH3BKQ3 813 aa18.33■□□□□ 0.53
Ubr2-201ENSMUST00000113335 AcrbpQ3V140 540 aa18.33■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Gm21663A0A0G2JE01 267 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Gm7361D3Z6R1 267 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 5031410I06RikE9Q4E0 267 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Gm1979E9QAN3 267 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Gm5862K7N5V5 267 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Gm10220K7N660 267 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Mcm3P25206 812 aaKnown RBP18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Mcm4P49717 862 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Gjb2Q00977 226 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Ell2Q3UKU1 639 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Trim34bJ3QNR8 485 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Fam43aQ8BUP8 424 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Ccdc39Q9D5Y1 937 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Btbd11Q6GQW0 1109 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 TxlnbQ8VBT1 685 aa18.32■□□□□ 0.52
Ubr2-201ENSMUST00000113335 Lmbr1Q9JIT0 490 aa18.32■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms