RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Brd1E9PZ26 1189 aaKnown RBP9.26□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Cc2d1aQ8K1A6 943 aa9.26□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Abca9Q8K449 1623 aa9.26□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Terf2O35144 541 aa9.26□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Vamp4O70480 141 aa9.26□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Mcm2P97310 904 aa9.26□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Idi2Q8BFZ6 227 aa9.26□□□□□ -0.93
Bdnf-207ENSMUST00000111047 PtmsQ9D0J8 101 aaKnown RBP9.26□□□□□ -0.93
Bdnf-207ENSMUST00000111047 MccE9PWI3 1003 aa9.25□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Gcc1Q9D4H2 778 aa9.25□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Tfip11Q9ERA6 838 aaKnown RBP9.25□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Catsper2A2ARP9 588 aa9.25□□□□□ -0.93
Bdnf-207ENSMUST00000111047 SlkO54988 1233 aa9.25□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Tshz2Q68FE9 1030 aa9.25□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Abca8aQ8K442 1620 aa9.25□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Map3k19E9Q3S4 1311 aa9.25□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Wdr63B2RY71 923 aa9.24□□□□□ -0.93
Bdnf-207ENSMUST00000111047 1700010I14RikQ7TPG0 532 aa9.24□□□□□ -0.93
Bdnf-207ENSMUST00000111047 HnrnpmQ9D0E1 729 aaKnown RBP9.24□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Tnnt1O88346 262 aa9.24□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Aplp1Q03157 653 aa9.24□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Adgrl3Q80TS3 1537 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 MaddQ80U28 1577 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Tecpr2Q3UH45 1423 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Nsd3Q6P2L6 1439 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Gm21190A0A0G2JGJ6 266 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Mcm4P49717 862 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Sv2bQ8BG39 683 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Q9D2X8 372 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Ap3b2Q9JME5 1082 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Arhgap23Q69ZH9 1483 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Fndc1E9Q043 1732 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Yeats2Q3TUF7 1407 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Tbc1d9Q3UYK3 1264 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Trim28Q62318 834 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Rsph6aQ8CDR2 708 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Iqsec2Q5DU25 1478 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Asxl2Q8BZ32 1370 aa9.23□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Topbp1Q6ZQF0 1515 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 LifrP42703 1092 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Irf5P56477 497 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Ggnbp2Q5SV77 696 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 TmpoQ61033 693 aaKnown RBP9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 DnmbpQ6TXD4 1580 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Cfap65Q3V0B4 1847 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Knl1Q66JQ7 1612 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Gm10093D3YYI8 482 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Hdac1O09106 482 aaKnown RBP9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Hoxb7P09024 217 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Trim27Q62158 513 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Klhdc4Q921I2 584 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Cyp46a1Q9WVK8 500 aa9.22□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Stk11ipQ3TAA7 1072 aa9.21□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Q4VA45 678 aa9.21□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Cavin2Q63918 418 aaKnown RBP9.21□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Cdk5rap2Q8K389 1822 aa9.21□□□□□ -0.93
Bdnf-207ENSMUST00000111047 Ehbp1l1Q99MS7 1716 aa9.21□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Cdc42bpgQ80UW5 1551 aa9.21□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Pik3r4Q8VD65 1358 aa9.21□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Paxip1Q6NZQ4 1056 aa9.21□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Ppip5k2Q6ZQB6 1129 aa9.21□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Phf14Q9D4H9 881 aa9.2□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Dhx30Q99PU8 1217 aaKnown RBP9.2□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Cul9Q80TT8 1865 aa9.2□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Prkar2bP31324 416 aa9.2□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Isy1Q69ZQ2 285 aaKnown RBP9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Erich6bQ9D4S6 220 aa9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Plekhg1F6S200 1446 aa9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Mroh1E0CZ22 1640 aa9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Tmem131lQ3U3D7 1597 aa9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Q3UJC8 639 aa9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Fam43aQ8BUP8 424 aa9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Smarca5Q91ZW3 1051 aaKnown RBP9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Dip2cE9PWR4 1557 aa9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Eif4a2P10630 407 aa9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Synj2Q9D2G5 1434 aa9.19□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Anapc15-psA0A140T8L6 141 aa9.18□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Zkscan2G3X952 960 aa9.18□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Gnai2P08752 355 aaKnown RBP9.18□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Atp6v1dP57746 247 aa9.18□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Fam13aQ8BGI4 693 aa9.18□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Zkscan1Q8BGS3 561 aaKnown RBP9.18□□□□□ -0.94
Bdnf-207ENSMUST00000111047 FanclQ9CR14 375 aa9.18□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Myom1Q62234 1667 aaKnown RBP9.18□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Dennd6aQ8BH65 605 aa9.18□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Uhrf1bp1B2KF50 1429 aa9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Filip1lQ6P6L0 1131 aa9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Aldh8a1Q8BH00 487 aa9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Nphp1Q9QY53 687 aa9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Nrxn1Q9CS84 1514 aa9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Hmox1P14901 289 aa9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Erc2Q6PH08 957 aa9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Med14A2ABV5 1459 aaKnown RBP9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Uhrf1bp1lA2RSJ4 1457 aa9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Smarce1O54941 411 aaKnown RBP9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 HypkQ9CR41 129 aa9.17□□□□□ -0.94
Bdnf-207ENSMUST00000111047 MyclP10166 368 aa9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Naip7Q9JIB3 1402 aa9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Ahdc1Q6PAL7 1594 aaKnown RBP9.16□□□□□ -0.94
Bdnf-207ENSMUST00000111047 Phactr2B1AVP0 632 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms