RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Slc12a5Q91V14 1138 aa29.92■■■□□ 2.38
Scn1b-201ENSMUST00000098548 Parp14Q2EMV9 1817 aa29.92■■■□□ 2.38
Scn1b-201ENSMUST00000098548 Nol11Q8BJW5 723 aaKnown RBP29.9■■■□□ 2.38
Scn1b-201ENSMUST00000098548 Upf2A2AT37 1269 aaKnown RBP29.89■■■□□ 2.38
Scn1b-201ENSMUST00000098548 Eif4a2P10630 407 aa29.89■■■□□ 2.38
Scn1b-201ENSMUST00000098548 Rtl5Q5DTT4 599 aa29.89■■■□□ 2.38
Scn1b-201ENSMUST00000098548 Ccne1Q61457 408 aa29.89■■■□□ 2.38
Scn1b-201ENSMUST00000098548 Rsph6aQ8CDR2 708 aa29.87■■■□□ 2.37
Scn1b-201ENSMUST00000098548 Ptpn23Q6PB44 1692 aa29.85■■■□□ 2.37
Scn1b-201ENSMUST00000098548 Rad17Q6NXW6 688 aa29.85■■■□□ 2.37
Scn1b-201ENSMUST00000098548 Kiaa1107Q80TK0 1369 aa29.85■■■□□ 2.37
Scn1b-201ENSMUST00000098548 Pard3Q99NH2 1333 aa29.83■■■□□ 2.37
Scn1b-201ENSMUST00000098548 Fnbp4Q6ZQ03 1031 aa29.83■■■□□ 2.37
Scn1b-201ENSMUST00000098548 GsdmaQ9EST1 446 aa29.83■■■□□ 2.37
Scn1b-201ENSMUST00000098548 Tsen2Q6P7W5 460 aa29.82■■■□□ 2.36
Scn1b-201ENSMUST00000098548 RgmbQ7TQ33 436 aa29.82■■■□□ 2.36
Scn1b-201ENSMUST00000098548 Eno4Q8C042 619 aa29.82■■■□□ 2.36
Scn1b-201ENSMUST00000098548 Slx1bQ8BX32 270 aa29.81■■■□□ 2.36
Scn1b-201ENSMUST00000098548 Emilin2Q8K482 1074 aa29.81■■■□□ 2.36
Scn1b-201ENSMUST00000098548 Csrnp3P59055 597 aa29.81■■■□□ 2.36
Scn1b-201ENSMUST00000098548 OptnQ8K3K8 584 aa29.81■■■□□ 2.36
Scn1b-201ENSMUST00000098548 CrklP47941 303 aa29.8■■■□□ 2.36
Scn1b-201ENSMUST00000098548 Psrc1Q9D0P7 329 aa29.8■■■□□ 2.36
Scn1b-201ENSMUST00000098548 MpripP97434 1024 aa29.79■■■□□ 2.36
Scn1b-201ENSMUST00000098548 Eya1P97767 591 aa29.78■■■□□ 2.36
Scn1b-201ENSMUST00000098548 PalmQ9Z0P4 383 aa29.78■■■□□ 2.36
Scn1b-201ENSMUST00000098548 Eif5bQ05D44 1216 aaKnown RBP29.77■■■□□ 2.36
Scn1b-201ENSMUST00000098548 U2af1Q9D883 239 aaKnown RBP29.77■■■□□ 2.36
Scn1b-201ENSMUST00000098548 Tcerg1Q8CGF7 1100 aaKnown RBP29.76■■■□□ 2.35
Scn1b-201ENSMUST00000098548 Calr4Q3TQS0 420 aa29.74■■■□□ 2.35
Scn1b-201ENSMUST00000098548 Col15a1O35206 1367 aa29.74■■■□□ 2.35
Scn1b-201ENSMUST00000098548 FocadA2AKG8 1798 aa29.73■■■□□ 2.35
Scn1b-201ENSMUST00000098548 Aplp2Q06335 707 aa29.73■■■□□ 2.35
Scn1b-201ENSMUST00000098548 Esx1O88933 382 aa29.72■■■□□ 2.35
Scn1b-201ENSMUST00000098548 Slit1Q80TR4 1531 aa29.71■■■□□ 2.35
Scn1b-201ENSMUST00000098548 Mcm10Q0VBD2 885 aa29.7■■■□□ 2.35
Scn1b-201ENSMUST00000098548 Plin1Q8CGN5 517 aa29.7■■■□□ 2.35
Scn1b-201ENSMUST00000098548 Zfp444Q3TDV8 331 aaKnown RBP29.69■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Map4k4P97820 1233 aaKnown RBP29.69■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Shank2Q80Z38 1476 aa29.68■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Pak3Q61036 559 aa29.68■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Golga2Q921M4 999 aa29.68■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Kank1E9Q238 1360 aa29.67■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Dmrt2Q8BG36 561 aa29.67■■■□□ 2.34
Scn1b-201ENSMUST00000098548 TkfcQ8VC30 578 aa29.67■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Kdm6aO70546 1401 aa29.67■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Ccdc129Q14B48 1034 aa29.66■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Tnrc6cQ3UHC0 1690 aaKnown RBP29.66■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Spef2Q8C9J3 1734 aa29.65■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Gm10471E9Q1C7 252 aa29.65■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Zranb3Q6NZP1 1069 aa29.65■■■□□ 2.34
Scn1b-201ENSMUST00000098548 InhbeO08717 350 aa29.64■■■□□ 2.34
Scn1b-201ENSMUST00000098548 Ncbp3Q8BZR9 615 aaKnown RBP29.63■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Akap11E9Q777 1895 aa29.62■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Sf3b2Q3UJB0 878 aaKnown RBP29.62■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Zeb2Q9R0G7 1215 aa29.62■■■□□ 2.33
Scn1b-201ENSMUST00000098548 TnikP83510 1323 aa29.62■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Zpr1Q62384 459 aa29.61■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Ppp1r37Q8BKR5 712 aa29.61■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Plekhd1B2RPU2 505 aa29.6■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Ttc41Q692V3 1318 aa29.6■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Fbln2P37889 1221 aa29.6■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Sgsm1Q8BPQ7 1093 aa29.6■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Fer1l6E0CZ42 1862 aa29.59■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Ralbp1Q62172 648 aa29.59■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Apaf1O88879 1249 aa29.58■■■□□ 2.33
Scn1b-201ENSMUST00000098548 Simc1E9Q6E9 1354 aa29.57■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Cacna1sQ02789 1880 aa29.57■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Usp19Q3UJD6 1360 aa29.56■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Fchsd2Q3USJ8 740 aa29.56■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Rad21Q61550 635 aaKnown RBP29.56■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Ciz1Q8VEH2 845 aa29.55■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Larp1bA0A0A6YXJ7 370 aaKnown RBP29.54■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Mast2Q60592 1734 aa29.53■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Q4VA45 678 aa29.53■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Ltbp1Q8CG19 1712 aa29.53■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Kat6bQ8BRB7 1872 aa29.53■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Zfp777B9EKF4 885 aa29.52■■■□□ 2.32
Scn1b-201ENSMUST00000098548 Uspl1Q3ULM6 1089 aa29.52■■■□□ 2.32
Scn1b-201ENSMUST00000098548 CrbnQ8C7D2 445 aa29.52■■■□□ 2.32
Scn1b-201ENSMUST00000098548 L3mbtl2P59178 703 aa29.51■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Cc2d1aQ8K1A6 943 aa29.51■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Stk31Q99MW1 1018 aa29.51■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Cabp2Q9JLK4 216 aa29.51■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Fam50bQ9WTJ8 334 aa29.51■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Pm20d1Q8C165 503 aa29.5■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Speer4f1Q9D5Q6 258 aa29.49■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Znf541Q0GGX2 1363 aa29.48■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Plekhh1Q80TI1 1356 aa29.48■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Mapk8ip3Q9ESN9 1337 aa29.48■■■□□ 2.31
Scn1b-201ENSMUST00000098548 ThemisQ8BGW0 636 aa29.47■■■□□ 2.31
Scn1b-201ENSMUST00000098548 HypkQ9CR41 129 aa29.47■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Ahnak2E9PYB0 1738 aaKnown RBP29.46■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Adgrb1Q3UHD1 1582 aa29.46■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Arfgef2A2A5R2 1792 aa29.45■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Gsdma3Q5Y4Y6 464 aa29.45■■■□□ 2.31
Scn1b-201ENSMUST00000098548 Tnks1bp1P58871 1720 aa29.43■■■□□ 2.3
Scn1b-201ENSMUST00000098548 Nup153E9Q3G8 1462 aaKnown RBP29.43■■■□□ 2.3
Scn1b-201ENSMUST00000098548 TmpoQ61033 693 aaKnown RBP29.43■■■□□ 2.3
Scn1b-201ENSMUST00000098548 Ccdc30Q8BVF4 654 aa29.4■■■□□ 2.3
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms