RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Ca8P28651 291 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 ClasrpQ8CFC7 668 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Fam177a1Q8BR63 207 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Gbp4Q61107 620 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ppm1eQ80TL0 749 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Stk38Q91VJ4 465 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Zfp644E9QA22 1323 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Cfap73J3QPZ5 306 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ptgs1P22437 602 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ube2hP62257 183 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 SarnpQ9D1J3 210 aaKnown RBP7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Maco1Q7TQE6 664 aaKnown RBP7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Golga5Q9QYE6 729 aa7.07□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Gtf2f1Q3THK3 508 aaKnown RBP7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ccdc186Q8C9S4 917 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Evc2Q8K1G2 1220 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 4930548H24RikQ9D496 437 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Usp25P57080 1055 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ktn1Q61595 1327 aaKnown RBP7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Gnai1B2RSH2 354 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Hdgfl1Q2VPR5 283 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Gnai3Q9DC51 354 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Usp40Q8BWR4 1235 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Krt82Q99M74 516 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Anp32cQ64G17 123 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Vps37cQ8R105 352 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Swt1Q9DBQ9 907 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Paip2Q9D6V8 124 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Tmx1Q8VBT0 278 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ssr1Q9CY50 286 aaKnown RBP7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ccdc93Q7TQK5 629 aa7.06□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Igsf3Q6ZQA6 1194 aa7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Als2cr12Q8BVM7 383 aa7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ccdc178Q8CDV0 866 aa7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Cfap157Q0VFX2 523 aa7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Snx13Q6PHS6 957 aa7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Pnpla2Q8BJ56 486 aa7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Stk31Q99MW1 1018 aa7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ripk4Q9ERK0 786 aa7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Dhx57Q6P5D3 1388 aaKnown RBP7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Rps6ka5Q8C050 863 aa7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 PhaxQ9JJT9 385 aaKnown RBP7.05□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Necab1Q8BG18 352 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Pof1bQ8K4L4 587 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Cep57l1Q8VDS7 400 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Cux2P70298 1426 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Rab11fip3Q8CHD8 1047 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 MycbpQ9EQS3 103 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 KdrP35918 1367 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ppp6r1Q7TSI3 856 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Rsph10bE9PYQ0 876 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Gadd45bP22339 160 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Hs1bp3Q3TC93 395 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ercc3P49135 783 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Abcd1P48410 736 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Fam76aQ922G2 307 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ncoa1P70365 1447 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Calcoco1Q8CGU1 691 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Duxf3A0A0N4SV92 674 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Oas2E9Q9A9 742 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Wwc1Q5SXA9 1104 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Armc9Q9D2I5 817 aa7.04□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Capn2O08529 700 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Dnai2A2AC93 623 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Gm10093D3YYI8 482 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Hdac1O09106 482 aaKnown RBP7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Rai14Q9EP71 979 aaKnown RBP7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Btn2a2A4QPC6 514 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Mis12Q9CY25 206 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Acbd3Q8BMP6 525 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Frat1P70339 274 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Mctp2Q5RJH2 878 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Naa25Q8BWZ3 972 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Brd1E9PZ26 1189 aaKnown RBP7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Gng11P61953 73 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Phldb1Q6PDH0 1371 aaKnown RBP7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Mcm5P49718 733 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ddx27Q921N6 760 aaKnown RBP7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Stx6Q9JKK1 255 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Gm10471E9Q1C7 252 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ano6Q6P9J9 911 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Nol10Q5RJG1 687 aaKnown RBP7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 TxlnbQ8VBT1 685 aa7.03□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Cep63Q3UPP8 700 aa7.02□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Prpf4bQ61136 1007 aaKnown RBP7.02□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Ddx19aQ61655 478 aaKnown RBP7.02□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Smc2Q8CG48 1191 aaKnown RBP7.02□□□□□ -1.28
Ubr4-201ENSMUST00000097822 Atp6v1aP50516 617 aaKnown RBP7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Abcf1Q6P542 837 aaKnown RBP7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Ccdc12Q8R344 166 aaKnown RBP7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Stac3Q8BZ71 360 aa7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Igbp1bQ9QZ29 343 aa7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Gm3409A0A0G2JE67 319 aa7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 IncenpQ9WU62 880 aa7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Ddx49Q4FZF3 480 aaKnown RBP7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Nphp1Q9QY53 687 aa7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Syt10Q9R0N4 523 aa7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Akap8Q9DBR0 687 aaKnown RBP7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Ccdc66Q6NS45 935 aa7.02□□□□□ -1.29
Ubr4-201ENSMUST00000097822 Cavin4A2AMM0 362 aa7.02□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 96.8 ms