RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 PtprgQ05909 1442 aa17.62■□□□□ 0.41
Hmgb1-202ENSMUST00000093196 Cd109Q8R422 1442 aa17.62■□□□□ 0.41
Hmgb1-202ENSMUST00000093196 Irf5P56477 497 aa17.61■□□□□ 0.41
Hmgb1-202ENSMUST00000093196 Prrt3Q6PE13 971 aa17.61■□□□□ 0.41
Hmgb1-202ENSMUST00000093196 Cdk11bP24788 784 aaKnown RBP17.6■□□□□ 0.41
Hmgb1-202ENSMUST00000093196 VwdeQ6DFV8 926 aa17.6■□□□□ 0.41
Hmgb1-202ENSMUST00000093196 Slit3Q9WVB4 1523 aa17.6■□□□□ 0.41
Hmgb1-202ENSMUST00000093196 Shank2Q80Z38 1476 aa17.59■□□□□ 0.41
Hmgb1-202ENSMUST00000093196 Foxd4Q60688 444 aa17.59■□□□□ 0.41
Hmgb1-202ENSMUST00000093196 Usp32F8VPZ3 1604 aa17.58■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 Vps8Q0P5W1 1427 aa17.57■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 Fchsd2Q3USJ8 740 aa17.57■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 Hic1Q9R1Y5 733 aa17.57■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 Astn2Q80Z10 1352 aa17.56■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 Tns2Q8CGB6 1400 aa17.55■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 Nrxn1Q9CS84 1514 aa17.55■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 NppbP40753 121 aa17.53■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 Fndc3aQ8BX90 1198 aa17.53■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 WasP70315 520 aa17.52■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 Masp1P98064 704 aa17.52■□□□□ 0.4
Hmgb1-202ENSMUST00000093196 Ccdc85cE9Q6B2 420 aa17.51■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Alkbh8Q80Y20 664 aa17.51■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Cacna1sQ02789 1880 aa17.5■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Golgb1E9PVZ8 3238 aa17.5■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Ttll5Q8CHB8 1328 aa17.49■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Ppip5k1A2ARP1 1436 aa17.49■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Wnk3Q80XP9 1757 aa17.49■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 CntlnA2AM05 1397 aa17.49■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Rab3gap2Q8BMG7 1366 aa17.49■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Rreb1Q3UH06 1700 aaKnown RBP17.49■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Adra2bP30545 450 aa17.48■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Kif1bQ60575 1816 aaKnown RBP17.48■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Dmrta2A2A9A2 531 aa17.47■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Kri1Q8VDQ9 704 aaKnown RBP17.47■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Pola1P33609 1465 aa17.47■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Pik3c2bE9QAN8 1632 aa17.47■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Farp2Q91VS8 1065 aa17.46■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Sipa1l2Q80TE4 1722 aa17.46■□□□□ 0.39
Hmgb1-202ENSMUST00000093196 Foxp4Q9DBY0 795 aaKnown RBP17.45■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Myom1Q62234 1667 aaKnown RBP17.45■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Itsn2Q9Z0R6 1659 aa17.44■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Rad23bP54728 416 aa17.43■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Recql4Q75NR7 1216 aaKnown RBP17.43■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Prdm2A2A7B5 1709 aaKnown RBP17.43■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Cep170bQ80U49 1574 aa17.42■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Ssh2Q5SW75 1423 aa17.42■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Kcna6Q61923 529 aa17.42■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 HnrnpmQ9D0E1 729 aaKnown RBP17.42■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Unc5aQ8K1S4 898 aa17.41■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Atp7aQ64430 1491 aa17.41■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Shank3Q4ACU6 1730 aa17.41■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Adgre1Q61549 931 aa17.4■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Hirip3Q8BLH7 601 aa17.4■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Taok3Q8BYC6 898 aa17.4■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Eea1Q8BL66 1411 aa17.39■□□□□ 0.38
Hmgb1-202ENSMUST00000093196 Atp7bQ64446 1462 aa17.39■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Ccdc129Q14B48 1034 aa17.39■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Secisbp2lQ6A098 1086 aaKnown RBP17.39■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Psen1P49769 467 aa17.38■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Ttc21bQ0HA38 1315 aa17.38■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Atp10bB1AWN4 1474 aa17.37■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Prrc2bQ7TPM1 1486 aaKnown RBP17.37■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Fbxo31Q3TQF0 507 aa17.37■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Foxd1Q61345 456 aa17.37■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 JmyQ9QXM1 983 aa17.37■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Dab2P98078 766 aa17.36■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Rpusd2Q149F1 553 aa17.36■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Ccdc102aQ3TMW1 549 aa17.35■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Themis2Q91YX0 663 aa17.35■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Pik3c2gO70167 1506 aa17.35■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Cps1Q8C196 1500 aa17.34■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Pik3r4Q8VD65 1358 aa17.34■□□□□ 0.37
Hmgb1-202ENSMUST00000093196 Neurod1Q60867 357 aa17.33■□□□□ 0.36
Hmgb1-202ENSMUST00000093196 Gpr162Q3UN16 588 aa17.32■□□□□ 0.36
Hmgb1-202ENSMUST00000093196 Ift172Q6VH22 1749 aa17.32■□□□□ 0.36
Hmgb1-202ENSMUST00000093196 Fer1l6E0CZ42 1862 aa17.31■□□□□ 0.36
Hmgb1-202ENSMUST00000093196 Sirt1Q923E4 737 aa17.3■□□□□ 0.36
Hmgb1-202ENSMUST00000093196 Chst12Q99LL3 419 aa17.3■□□□□ 0.36
Hmgb1-202ENSMUST00000093196 Mast2Q60592 1734 aa17.29■□□□□ 0.36
Hmgb1-202ENSMUST00000093196 Gm10563F6WIE4 79 aa17.28■□□□□ 0.36
Hmgb1-202ENSMUST00000093196 AnkarA2RT91 1465 aa17.28■□□□□ 0.36
Hmgb1-202ENSMUST00000093196 AtrnQ9WU60 1428 aa17.27■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 Dnm1lQ8K1M6 742 aa17.26■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 ArntlQ9WTL8 632 aa17.26■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 Kif20bQ80WE4 1774 aaKnown RBP17.25■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 ZxdbA2CE44 873 aa17.25■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 MarsQ68FL6 902 aaKnown RBP17.25■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 Trpc5Q9QX29 975 aa17.25■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 Mtus2Q3UHD3 1353 aa17.25■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 AatkQ80YE4 1365 aa17.25■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 Cdhr2E9Q7P9 1308 aa17.22■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 Nfat5Q9WV30 1534 aa17.22■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 LtbrP50284 415 aa17.22■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 Abca15E9PWH4 1668 aa17.22■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 Snapc4Q8BP86 1333 aa17.21■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 AW822073A0A0N4SUK1 652 aa17.21■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 4930523C07RikE9Q2T4 99 aa17.21■□□□□ 0.35
Hmgb1-202ENSMUST00000093196 Abcc5Q9R1X5 1436 aa17.21■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Nckap5lQ6GQX2 1323 aa17.21■□□□□ 0.34
Hmgb1-202ENSMUST00000093196 Vars2Q3U2A8 1060 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms