RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 PrxO55103 1391 aa17.26■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Trim30cD3YVI9 513 aa17.25■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Grpel1Q99LP6 217 aa17.25■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Cep135Q6P5D4 1140 aa17.25■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Ccdc181Q80ZU5 509 aa17.25■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Tdrd9Q14BI7 1383 aa17.25■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Lamb3Q61087 1168 aa17.25■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Erlin2Q8BFZ9 340 aa17.24■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Gm1043A0A140LJC2 1431 aa17.24■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Hspa4Q61316 841 aa17.24■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Sycp1Q62209 993 aa17.24■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Il16O54824 1322 aa17.24■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Zmym4A2A791 1549 aaKnown RBP17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Apaf1O88879 1249 aa17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Me1P06801 572 aa17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Maco1Q7TQE6 664 aaKnown RBP17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Paf1Q8K2T8 535 aa17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Tubb4aQ9D6F9 444 aa17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Cd109Q8R422 1442 aa17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Jakmip3Q5DTN8 844 aa17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Gnl2Q99LH1 728 aaKnown RBP17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Mmel1Q9JLI3 765 aa17.23■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Gsto1O09131 240 aa17.22■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 AcrbpQ3V140 540 aa17.22■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 FanciQ8K368 1330 aa17.22■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Fchsd2Q3USJ8 740 aa17.22■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Soga1E1U8D0 1418 aa17.22■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Serpinb6bO08804 377 aa17.22■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Luc7lQ9CYI4 371 aaKnown RBP17.22■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Nap1l1P28656 391 aaKnown RBP17.21■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Ktn1Q61595 1327 aaKnown RBP17.21■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Exoc8Q6PGF7 716 aa17.21■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Ccdc191J3QQ27 883 aa17.21■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Strn4P58404 760 aa17.21■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Ttll5Q8CHB8 1328 aa17.21■□□□□ 0.35
Pcdha1-201ENSMUST00000070797 Ube2hP62257 183 aa17.21■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Aldh1l1Q8R0Y6 902 aa17.21■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Igbp1bQ9QZ29 343 aa17.21■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 CenphQ9QYM8 241 aa17.2■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Cdc45Q9Z1X9 566 aa17.2■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Gbp4Q61107 620 aa17.2■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Rhot2Q8JZN7 620 aa17.2■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Dhx9O70133 1380 aaKnown RBP17.2■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Top1mtQ8R4U6 593 aa17.2■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Snw1Q9CSN1 536 aaKnown RBP17.2■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Cfap45Q9D9U9 551 aa17.2■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Mink1Q9JM52 1308 aa17.2■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Cfap157Q0VFX2 523 aa17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Puf60Q3UEB3 564 aaKnown RBP17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Q8C5K5 320 aa17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Ccar2Q8VDP4 922 aaKnown RBP17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Prdm16A2A935 1275 aa17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Gm10093D3YYI8 482 aa17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Hdac1O09106 482 aaKnown RBP17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Zfp251Q6PCX8 632 aa17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Cfdp1O88271 295 aaKnown RBP17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Gsdma3Q5Y4Y6 464 aa17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Trim25Q61510 634 aaKnown RBP17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Cpa2Q504N0 417 aa17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Rnf187Q8BFX1 236 aa17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 DroshaQ5HZJ0 1373 aaKnown RBP17.19■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Serpina10Q8R121 448 aa17.18■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Fam114a1Q9D281 569 aa17.18■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Ptpdc1Q6NZK8 747 aa17.18■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Neurod6P48986 337 aa17.18■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Dydc1Q9D9T0 175 aa17.18■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Sos1Q62245 1319 aa17.18■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Mcm3P25206 812 aaKnown RBP17.17■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Abcd1P48410 736 aa17.17■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Ccdc73Q8CDM4 1066 aa17.17■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Odf2lQ9D478 642 aa17.17■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Erlin1Q91X78 346 aa17.17■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Rfx7F8VPJ6 1459 aa17.17■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Fam107bQ3TGF2 131 aa17.17■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Prpf4bQ61136 1007 aaKnown RBP17.17■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Cdc37l1Q9CZP7 335 aa17.17■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Catsper2A2ARP9 588 aa17.16■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Tbc1d9Q3UYK3 1264 aa17.16■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Gm18336A0A140LIU8 765 aa17.16■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Pafah1b1P63005 410 aaKnown RBP17.16■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Clul1Q3ZRW6 464 aa17.16■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 March6Q6ZQ89 909 aa17.16■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Kdm4aQ8BW72 1064 aa17.16■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Ccdc178Q8CDV0 866 aa17.16■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Stx1aO35526 288 aa17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Shq1Q7TMX5 569 aa17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Tango6Q8C3S2 1079 aa17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Eif5P59325 429 aaKnown RBP17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Cabp4Q8VHC5 271 aa17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Atp2b2Q9R0K7 1198 aa17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 EprsQ8CGC7 1512 aaKnown RBP17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Ccdc96Q9CR92 584 aa17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Gm21671G3UY31 267 aa17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Gtf2f1Q3THK3 508 aaKnown RBP17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Ankrd1Q9CR42 319 aa17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Irx4Q9QY61 515 aa17.15■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Rbm27Q5SFM8 1060 aaKnown RBP17.14■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Zmym3Q9JLM4 1370 aa17.14■□□□□ 0.34
Pcdha1-201ENSMUST00000070797 Gzf1Q4VBD9 706 aa17.14■□□□□ 0.33
Pcdha1-201ENSMUST00000070797 Ccdc43Q9CR29 222 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms