RNA–Protein interactions for RNA: ENSMUST00000068992.7

Pcdh9-201, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh9, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-201ENSMUST00000068992 Inpp5bQ8K337 993 aa10.47□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Prrc2bQ7TPM1 1486 aaKnown RBP10.46□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Zfp777B9EKF4 885 aa10.46□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Kank4Q6P9J5 1016 aa10.46□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 PogkQ80TC5 607 aa10.46□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 DmtnQ9WV69 405 aa10.46□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Dip2bQ3UH60 1574 aa10.46□□□□□ -0.73
Pcdh9-201ENSMUST00000068992 Puf60Q3UEB3 564 aaKnown RBP10.46□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Q3UPC7 1272 aa10.46□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 PaskQ8CEE6 1383 aa10.45□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 FocadA2AKG8 1798 aa10.45□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Ubr2Q6WKZ8 1755 aa10.45□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Shank3Q4ACU6 1730 aa10.45□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Fan1Q69ZT1 1020 aa10.45□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Sipa1l3G3X9J0 1776 aa10.45□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Dusp27Q148W8 1138 aa10.45□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 NinlQ6ZQ12 1394 aa10.45□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Bloc1s4Q8VED2 215 aa10.44□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Clcn1Q64347 994 aa10.44□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Rrp9Q91WM3 475 aaKnown RBP10.44□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Tnks1bp1P58871 1720 aa10.44□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Tmx3Q8BXZ1 456 aa10.44□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Kif18aQ91WD7 886 aa10.44□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Nwd2Q6P5U7 1742 aa10.43□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 LifrP42703 1092 aa10.43□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 OvosQ3UU35 1456 aa10.43□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Vamp4O70480 141 aa10.42□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 GsdmaQ9EST1 446 aa10.42□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Siglec1Q62230 1695 aa10.42□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 PtpruB1AUH1 1446 aa10.42□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Col4a1P02463 1669 aa10.41□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Wdr63B2RY71 923 aa10.41□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Cog6Q8R3I3 657 aa10.41□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Clstn2Q9ER65 966 aa10.41□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Golgb1E9PVZ8 3238 aa10.41□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Pnpla7A2AJ88 1352 aa10.41□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Ecm29Q6PDI5 1840 aa10.41□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Thsd7aQ69ZU6 1645 aa10.41□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Tbc1d9Q3UYK3 1264 aa10.4□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Atl3Q91YH5 541 aa10.4□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Nid2O88322 1403 aa10.4□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 Gtf2e1Q9D0D5 440 aa10.4□□□□□ -0.74
Pcdh9-201ENSMUST00000068992 FAM186AQ9D9R9 1790 aa10.4□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Ppp6r3Q922D4 844 aa10.4□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Kdm2aP59997 1161 aa10.38□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 DaxxO35613 739 aa10.38□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 DpydQ8CHR6 1025 aa10.38□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Dnajc14Q921R4 703 aa10.38□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Trim27Q62158 513 aa10.37□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Ank1Q02357 1862 aa10.37□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Stard8Q8K031 1019 aa10.37□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Trim30dE9PWL0 497 aa10.37□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Tex2Q6ZPJ0 1128 aaKnown RBP10.37□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Armcx1Q9CX83 456 aa10.37□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Map3k19E9Q3S4 1311 aa10.37□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Anp32bQ9EST5 272 aaKnown RBP10.36□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Nfatc2ipO09130 412 aa10.36□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Tfip11Q9ERA6 838 aaKnown RBP10.36□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Sipa1l2Q80TE4 1722 aa10.36□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Akap11E9Q777 1895 aa10.36□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Nom1Q3UFM5 854 aaKnown RBP10.36□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Slc12a5Q91V14 1138 aa10.36□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 FancaQ9JL70 1439 aa10.35□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Aifm3Q3TY86 605 aa10.35□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Hsp90ab1P11499 724 aaKnown RBP10.35□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Abca3Q8R420 1704 aa10.35□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Tm6sf1P58749 370 aa10.35□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Kif3bQ61771 747 aa10.35□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 NpatQ8BMA5 1420 aa10.35□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Ankrd44B2RXR6 993 aa10.34□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Fkbp15Q6P9Q6 1216 aaKnown RBP10.34□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Zbtb7cQ8VCZ7 619 aa10.34□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Nfat5Q9WV30 1534 aa10.34□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Chrna2Q91X60 512 aa10.34□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 CenppQ9CZ92 286 aa10.34□□□□□ -0.75
Pcdh9-201ENSMUST00000068992 Chl1P70232 1209 aa10.33□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Plekhm2Q80TQ5 1018 aa10.33□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Ksr2Q3UVC0 959 aa10.33□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Vwa3bJ9JI28 736 aa10.33□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 NeflP08551 543 aa10.33□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Nol8Q3UHX0 1147 aaKnown RBP10.33□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Cyp27a1Q9DBG1 533 aa10.32□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Pank2Q3U4S0 443 aa10.32□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Nutm1Q8BHP2 1126 aa10.32□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Slc52a2Q9D8F3 450 aa10.32□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Mum1Q6DID5 682 aa10.32□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Aldh8a1Q8BH00 487 aa10.32□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Bag4Q8CI61 457 aa10.32□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Tnrc6cQ3UHC0 1690 aaKnown RBP10.31□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Cnga1P29974 684 aa10.31□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 SkilQ60665 675 aa10.31□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Rtn4Q99P72 1162 aaKnown RBP10.31□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Aldh1l1Q8R0Y6 902 aa10.31□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Ap3b2Q9JME5 1082 aa10.31□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 4933402E13RikQ9D4D2 429 aa10.31□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 MvpQ9EQK5 861 aa10.31□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Zscan25B2RX31 543 aa10.3□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Marf1Q8BJ34 1730 aaKnown RBP10.3□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Atg4a-psA0A0G2JFS9 396 aa10.3□□□□□ -0.76
Pcdh9-201ENSMUST00000068992 Atg4aQ8C9S8 396 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms