RNA–Protein interactions for RNA: ENSMUST00000050905.15

Tpm1-203, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-203ENSMUST00000050905 GalcP54818 684 aa13.2□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Nol11Q8BJW5 723 aaKnown RBP13.2□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Kat6bQ8BRB7 1872 aa13.2□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Rpgrip1Q9EPQ2 1331 aa13.19□□□□□ -0.3
Tpm1-203ENSMUST00000050905 OptnQ8K3K8 584 aa13.19□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Ppfibp2O35711 882 aa13.18□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Ddb1Q3U1J4 1140 aaKnown RBP13.18□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Chd4Q6PDQ2 1915 aaKnown RBP13.17□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Ano8Q6PB70 1060 aa13.17□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Bsdc1Q80Y55 427 aa13.17□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Zcrb1Q9CZ96 217 aaKnown RBP13.17□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Scn7aB1AYL1 1681 aa13.17□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Slit1Q80TR4 1531 aa13.17□□□□□ -0.3
Tpm1-203ENSMUST00000050905 CemipQ8BI06 1361 aa13.17□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Mdc1Q5PSV9 1707 aa13.16□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Snapc4Q8BP86 1333 aa13.16□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Vps33bP59016 617 aa13.16□□□□□ -0.3
Tpm1-203ENSMUST00000050905 PsdQ5DTT2 1024 aa13.16□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Vars2Q3U2A8 1060 aa13.15□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Sik1Q60670 779 aa13.15□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Rab3gap2Q8BMG7 1366 aa13.15□□□□□ -0.3
Tpm1-203ENSMUST00000050905 Map2P20357 1828 aa13.15□□□□□ -0.3
Tpm1-203ENSMUST00000050905 FocadA2AKG8 1798 aa13.13□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Pnpla7A2AJ88 1352 aa13.13□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Zpr1Q62384 459 aa13.13□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Slc24a1Q91WD8 1130 aa13.13□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Mst1rQ62190 1378 aa13.12□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Hoxc9P09633 260 aa13.12□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Zranb3Q6NZP1 1069 aa13.12□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Ginm1Q91WR6 327 aa13.12□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Col15a1O35206 1367 aa13.11□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Birc3O08863 600 aa13.11□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Exoc5Q3TPX4 708 aa13.11□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Arhgap33Q80YF9 1305 aa13.11□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Plekhd1B2RPU2 505 aa13.1□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Ccdc85cE9Q6B2 420 aa13.1□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Hoxd11P23813 323 aa13.09□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Fam184bQ0KK56 942 aa13.09□□□□□ -0.31
Tpm1-203ENSMUST00000050905 Kcnh4A2A5F7 1018 aa13.08□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Pim2Q62070 370 aa13.08□□□□□ -0.32
Tpm1-203ENSMUST00000050905 En2P09066 324 aa13.07□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Sin3aQ60520 1274 aaKnown RBP13.07□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Ccne1Q61457 408 aa13.07□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Gm10471E9Q1C7 252 aa13.06□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Cc2d1aQ8K1A6 943 aa13.06□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Fam50bQ9WTJ8 334 aa13.06□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Ptpn23Q6PB44 1692 aa13.05□□□□□ -0.32
Tpm1-203ENSMUST00000050905 TkfcQ8VC30 578 aa13.05□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Adgrb1Q3UHD1 1582 aa13.04□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Magea1O89006 320 aa13.04□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Magea5O89009 320 aa13.04□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Q8BT18 775 aa13.04□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Afg3l2Q8JZQ2 802 aaKnown RBP13.04□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Magea2Q9R2A2 320 aa13.04□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Ahnak2E9PYB0 1738 aaKnown RBP13.04□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Ciz1Q8VEH2 845 aa13.03□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Arfgef2A2A5R2 1792 aa13.02□□□□□ -0.32
Tpm1-203ENSMUST00000050905 Scaf1Q5U4C3 1256 aaKnown RBP13.02□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Gpr150Q8BL07 427 aa13.02□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Nsd3Q6P2L6 1439 aa13.02□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Gm21680A0A0G2JGR8 267 aa13.01□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Kcna3P16390 528 aa13.01□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Elp1Q7TT37 1333 aaKnown RBP13.01□□□□□ -0.33
Tpm1-203ENSMUST00000050905 PrxO55103 1391 aa13.01□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Kif23E9Q5G3 953 aa13□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Ubxn2bQ0KL01 331 aa13□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Pank3Q8R2W9 370 aa13□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Smg6P61406 1418 aaKnown RBP12.99□□□□□ -0.33
Tpm1-203ENSMUST00000050905 IbtkQ6ZPR6 1352 aaKnown RBP12.99□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Sos2Q02384 1333 aa12.99□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Inpp5dQ9ES52 1191 aa12.99□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Hoxb7P09024 217 aa12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Aplp2Q06335 707 aa12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Fam198bQ3UPI1 517 aa12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Ankrd13dQ6PD24 605 aa12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Larp1Q6ZQ58 1072 aaKnown RBP12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Ppp1r37Q8BKR5 712 aa12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Cwc22Q8C5N3 908 aaKnown RBP12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Dcaf11Q91VU6 549 aa12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Speer4bQ9D9F7 267 aa12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Shank3Q4ACU6 1730 aa12.98□□□□□ -0.33
Tpm1-203ENSMUST00000050905 AtrnQ9WU60 1428 aa12.97□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Abca3Q8R420 1704 aa12.97□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Simc1E9Q6E9 1354 aa12.96□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Kcnq2Q9Z351 759 aa12.96□□□□□ -0.33
Tpm1-203ENSMUST00000050905 Parp14Q2EMV9 1817 aa12.95□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Tmf1B9EKI3 1091 aa12.95□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Emilin1Q99K41 1017 aa12.95□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Akt1s1Q9D1F4 257 aa12.95□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Eya1P97767 591 aa12.94□□□□□ -0.34
Tpm1-203ENSMUST00000050905 ThemisQ8BGW0 636 aa12.94□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Kiaa0319lQ8K135 1048 aa12.94□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Rps6ka4Q9Z2B9 773 aa12.94□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Eif4a2P10630 407 aa12.93□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Kdm6aO70546 1401 aa12.93□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Rad23bP54728 416 aa12.92□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Rad17Q6NXW6 688 aa12.92□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Trpc5Q9QX29 975 aa12.92□□□□□ -0.34
Tpm1-203ENSMUST00000050905 Fam71e1A1L3C1 212 aa12.91□□□□□ -0.34
Tpm1-203ENSMUST00000050905 4930572O03RikQ8C5Y0 211 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 60.1 ms