RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Zscan10Q3URR7 782 aa28.51■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 OptnQ8K3K8 584 aa28.51■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Gprasp1Q5U4C1 1347 aa28.51■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Hoxc9P09633 260 aa28.49■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Sugp2Q8CH09 1067 aa28.49■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Rad17Q6NXW6 688 aa28.48■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Slit1Q80TR4 1531 aa28.48■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Ly75Q60767 1723 aa28.48■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Ccdc6D3YZP9 469 aa28.46■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Kiaa0319Q5SZV5 1081 aa28.46■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Taok3Q8BYC6 898 aa28.46■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Plekhd1B2RPU2 505 aa28.46■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Pak3Q61036 559 aa28.46■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Mapk8ip2Q9ERE9 830 aa28.46■■■□□ 2.15
Ssbp4-201ENSMUST00000049908 Vps33bP59016 617 aa28.45■■■□□ 2.14
Ssbp4-201ENSMUST00000049908 Uhrf1bp1lA2RSJ4 1457 aa28.45■■■□□ 2.14
Ssbp4-201ENSMUST00000049908 FocadA2AKG8 1798 aa28.44■■■□□ 2.14
Ssbp4-201ENSMUST00000049908 Ppp6r1Q7TSI3 856 aa28.41■■■□□ 2.14
Ssbp4-201ENSMUST00000049908 4930523C07RikE9Q2T4 99 aa28.4■■■□□ 2.14
Ssbp4-201ENSMUST00000049908 Zpr1Q62384 459 aa28.4■■■□□ 2.14
Ssbp4-201ENSMUST00000049908 Ankrd23Q812A3 306 aa28.4■■■□□ 2.14
Ssbp4-201ENSMUST00000049908 TkfcQ8VC30 578 aa28.4■■■□□ 2.14
Ssbp4-201ENSMUST00000049908 Ptpn23Q6PB44 1692 aa28.39■■■□□ 2.13
Ssbp4-201ENSMUST00000049908 Ginm1Q91WR6 327 aa28.38■■■□□ 2.13
Ssbp4-201ENSMUST00000049908 Mst1rQ62190 1378 aa28.37■■■□□ 2.13
Ssbp4-201ENSMUST00000049908 Nwd2Q6P5U7 1742 aa28.37■■■□□ 2.13
Ssbp4-201ENSMUST00000049908 Ccne1Q61457 408 aa28.37■■■□□ 2.13
Ssbp4-201ENSMUST00000049908 Col15a1O35206 1367 aa28.36■■■□□ 2.13
Ssbp4-201ENSMUST00000049908 Ubap1lG3UW59 384 aa28.34■■■□□ 2.13
Ssbp4-201ENSMUST00000049908 Zranb3Q6NZP1 1069 aa28.34■■■□□ 2.13
Ssbp4-201ENSMUST00000049908 Ddb1Q3U1J4 1140 aaKnown RBP28.33■■■□□ 2.13
Ssbp4-201ENSMUST00000049908 Adamtsl1Q8BLI0 1745 aa28.32■■■□□ 2.12
Ssbp4-201ENSMUST00000049908 Sik1Q60670 779 aa28.29■■■□□ 2.12
Ssbp4-201ENSMUST00000049908 Cc2d1aQ8K1A6 943 aa28.28■■■□□ 2.12
Ssbp4-201ENSMUST00000049908 Cald1E9QA15 768 aaKnown RBP28.27■■■□□ 2.12
Ssbp4-201ENSMUST00000049908 Exoc5Q3TPX4 708 aa28.27■■■□□ 2.12
Ssbp4-201ENSMUST00000049908 Parp14Q2EMV9 1817 aa28.27■■■□□ 2.12
Ssbp4-201ENSMUST00000049908 Kcnh4A2A5F7 1018 aa28.27■■■□□ 2.12
Ssbp4-201ENSMUST00000049908 Gm10471E9Q1C7 252 aa28.26■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 Trim28Q62318 834 aa28.26■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 Zcrb1Q9CZ96 217 aaKnown RBP28.26■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 Sall2Q9QX96 1004 aa28.26■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 GakQ99KY4 1305 aa28.26■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 Kdm6aO70546 1401 aa28.23■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 Adgrb1Q3UHD1 1582 aa28.21■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 Simc1E9Q6E9 1354 aa28.21■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 Eif4a2P10630 407 aa28.21■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 Ppp1r15aP17564 657 aa28.21■■■□□ 2.11
Ssbp4-201ENSMUST00000049908 PnisrA2AJT4 805 aaKnown RBP28.2■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 Lrit1Q8K099 624 aa28.2■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 Eya1P97767 591 aa28.18■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 Kdm2bQ6P1G2 1309 aa28.17■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 Ildr2B5TVM2 661 aa28.17■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 OscarQ8VBT3 265 aa28.17■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 GalcP54818 684 aa28.16■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 Ppp1r37Q8BKR5 712 aa28.16■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 Fam50bQ9WTJ8 334 aa28.15■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 Elp1Q7TT37 1333 aaKnown RBP28.15■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 Ppfibp2O35711 882 aa28.15■■■□□ 2.1
Ssbp4-201ENSMUST00000049908 Rsph6aQ8CDR2 708 aa28.14■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 Ahnak2E9PYB0 1738 aaKnown RBP28.13■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 Aplp2Q06335 707 aa28.13■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 Apba2P98084 750 aa28.12■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 ThemisQ8BGW0 636 aa28.12■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 4930572O03RikQ8C5Y0 211 aa28.11■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 Arfgef2A2A5R2 1792 aa28.11■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 Gm21680A0A0G2JGR8 267 aa28.09■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 Vars2Q3U2A8 1060 aa28.08■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 Zfp777B9EKF4 885 aa28.08■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 Slc12a5Q91V14 1138 aa28.08■■■□□ 2.09
Ssbp4-201ENSMUST00000049908 Nsd3Q6P2L6 1439 aa28.08■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 Bsdc1Q80Y55 427 aa28.07■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 Speer4bQ9D9F7 267 aa28.07■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 Rab3gap2Q8BMG7 1366 aa28.06■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 Ppp2r1aQ76MZ3 589 aa28.05■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 MpripP97434 1024 aa28.04■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 Afg3l2Q8JZQ2 802 aaKnown RBP28.04■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 P2rx7Q9Z1M0 595 aa28.04■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 VirmaA2AIV2 1811 aaKnown RBP28.03■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 Supt5hO55201 1082 aaKnown RBP28.03■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 Arhgap33Q80YF9 1305 aa28.03■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 Pnpla7A2AJ88 1352 aa28.02■■■□□ 2.08
Ssbp4-201ENSMUST00000049908 Anp32bQ9EST5 272 aaKnown RBP28.01■■■□□ 2.07
Ssbp4-201ENSMUST00000049908 Erbb3Q61526 1339 aa28.01■■■□□ 2.07
Ssbp4-201ENSMUST00000049908 Snapc4Q8BP86 1333 aa28■■■□□ 2.07
Ssbp4-201ENSMUST00000049908 Gsdma3Q5Y4Y6 464 aa27.97■■■□□ 2.07
Ssbp4-201ENSMUST00000049908 Larp1Q6ZQ58 1072 aaKnown RBP27.95■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Pim2Q62070 370 aa27.94■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Nlrp6Q91WS2 869 aa27.94■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Sos2Q02384 1333 aa27.93■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Eif3bQ8JZQ9 803 aaKnown RBP27.93■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Rps6ka4Q9Z2B9 773 aa27.93■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Tns2Q8CGB6 1400 aa27.93■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 HypkQ9CR41 129 aa27.92■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Exoc6Q8R313 802 aa27.91■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 PalmQ9Z0P4 383 aa27.91■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Ezh2Q61188 746 aaKnown RBP27.9■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Wwc2Q6NXJ0 1187 aa27.9■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 Plin1Q8CGN5 517 aa27.89■■■□□ 2.06
Ssbp4-201ENSMUST00000049908 ApobrQ8VBT6 942 aa27.89■■■□□ 2.05
Retrieved 100 of 22,080 RNA–protein pairs in 72.8 ms