RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Robo1O89026 1612 aa29.89■■■□□ 2.38
Upf3a-201ENSMUST00000043767 Dusp27Q148W8 1138 aa29.89■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Ralbp1Q62172 648 aa29.89■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Siglec1Q62230 1695 aa29.86■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Ttll13A4Q9F6 804 aa29.86■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Erbb3Q61526 1339 aa29.86■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Eya1P97767 591 aa29.86■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Tet3Q8BG87 1668 aa29.85■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Rad17Q6NXW6 688 aa29.85■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Znf541Q0GGX2 1363 aa29.85■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Cavin4A2AMM0 362 aa29.84■■■□□ 2.37
Upf3a-201ENSMUST00000043767 Fmnl2A2APV2 1086 aa29.84■■■□□ 2.37
Upf3a-201ENSMUST00000043767 TnrQ8BYI9 1358 aa29.82■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Gas2l2Q5SSG4 860 aa29.82■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Bcl11bQ99PV8 884 aa29.82■■■□□ 2.36
Upf3a-201ENSMUST00000043767 TnikP83510 1323 aa29.82■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Cabp2Q9JLK4 216 aa29.81■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Gimap5Q8BWF2 308 aa29.81■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Kank1E9Q238 1360 aa29.8■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Ppp4r2Q0VGB7 417 aa29.8■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Ptpn23Q6PB44 1692 aa29.79■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Gm21698A0A087WQP8 267 aa29.78■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Gm21671G3UY31 267 aa29.78■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Uhrf1bp1B2KF50 1429 aa29.78■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Abca15E9PWH4 1668 aa29.77■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Ncbp3Q8BZR9 615 aaKnown RBP29.76■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Stk31Q99MW1 1018 aa29.76■■■□□ 2.36
Upf3a-201ENSMUST00000043767 Ciz1Q8VEH2 845 aa29.75■■■□□ 2.35
Upf3a-201ENSMUST00000043767 Atp7bQ64446 1462 aa29.74■■■□□ 2.35
Upf3a-201ENSMUST00000043767 Nid2O88322 1403 aa29.74■■■□□ 2.35
Upf3a-201ENSMUST00000043767 Swt1Q9DBQ9 907 aa29.74■■■□□ 2.35
Upf3a-201ENSMUST00000043767 Atp10bB1AWN4 1474 aa29.74■■■□□ 2.35
Upf3a-201ENSMUST00000043767 Cadps2Q8BYR5 1297 aa29.73■■■□□ 2.35
Upf3a-201ENSMUST00000043767 Acsbg1Q99PU5 721 aa29.72■■■□□ 2.35
Upf3a-201ENSMUST00000043767 Zmym3Q9JLM4 1370 aa29.71■■■□□ 2.35
Upf3a-201ENSMUST00000043767 Bcl9lQ67FY2 1494 aa29.7■■■□□ 2.35
Upf3a-201ENSMUST00000043767 Smim5Q8BT42 78 aa29.7■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Amotl2Q8K371 772 aa29.7■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Nol11Q8BJW5 723 aaKnown RBP29.69■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Zfp777B9EKF4 885 aa29.68■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Card10P58660 1021 aa29.68■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Txnrd1Q9JMH6 613 aa29.68■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Slit2Q9R1B9 1521 aa29.68■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Plekhh1Q80TI1 1356 aa29.67■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Hspa1lP16627 641 aa29.67■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Iqcf3Q9D498 203 aa29.67■■■□□ 2.34
Upf3a-201ENSMUST00000043767 TmpoQ61033 693 aaKnown RBP29.66■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Larp1bA0A0A6YXJ7 370 aaKnown RBP29.65■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Ttc41Q692V3 1318 aa29.65■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Ksr2Q3UVC0 959 aa29.64■■■□□ 2.34
Upf3a-201ENSMUST00000043767 Kdm6aO70546 1401 aa29.63■■■□□ 2.33
Upf3a-201ENSMUST00000043767 Upf2A2AT37 1269 aaKnown RBP29.62■■■□□ 2.33
Upf3a-201ENSMUST00000043767 OptnQ8K3K8 584 aa29.61■■■□□ 2.33
Upf3a-201ENSMUST00000043767 Col15a1O35206 1367 aa29.59■■■□□ 2.33
Upf3a-201ENSMUST00000043767 Cdhr2E9Q7P9 1308 aa29.59■■■□□ 2.33
Upf3a-201ENSMUST00000043767 Snap23O09044 210 aa29.59■■■□□ 2.33
Upf3a-201ENSMUST00000043767 CrklP47941 303 aa29.59■■■□□ 2.33
Upf3a-201ENSMUST00000043767 Tom1O88746 492 aa29.58■■■□□ 2.33
Upf3a-201ENSMUST00000043767 HypkQ9CR41 129 aa29.58■■■□□ 2.33
Upf3a-201ENSMUST00000043767 Ankrd50F7BE84 1390 aa29.58■■■□□ 2.33
Upf3a-201ENSMUST00000043767 Ttc21aQ8C0S4 1314 aa29.58■■■□□ 2.33
Upf3a-201ENSMUST00000043767 Znf526Q8BI66 675 aa29.57■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Ppp1r37Q8BKR5 712 aa29.57■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Senp3Q9EP97 568 aaKnown RBP29.57■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Ybx3Q9JKB3 361 aaKnown RBP29.57■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Trim26Q99PN3 545 aa29.56■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Liat1Q810M6 228 aa29.56■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Ahnak2E9PYB0 1738 aaKnown RBP29.54■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Rbm25B2RY56 838 aaKnown RBP29.54■■■□□ 2.32
Upf3a-201ENSMUST00000043767 ZgpatQ8VDM1 511 aa29.54■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Qtrt2B8ZXI1 415 aa29.54■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Gm10471E9Q1C7 252 aa29.54■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Gsdma3Q5Y4Y6 464 aa29.54■■■□□ 2.32
Upf3a-201ENSMUST00000043767 HdgfP51859 237 aaKnown RBP29.53■■■□□ 2.32
Upf3a-201ENSMUST00000043767 RgmbQ7TQ33 436 aa29.53■■■□□ 2.32
Upf3a-201ENSMUST00000043767 TkfcQ8VC30 578 aa29.53■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Bcl11aQ9QYE3 773 aa29.53■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Polr3glQ8R0C0 218 aa29.52■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Cdc37l1Q9CZP7 335 aa29.52■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Bcl2l12Q9D3J3 255 aa29.52■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Apbb1Q9QXJ1 710 aa29.52■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Trpm3Q5F4S9 1721 aa29.52■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Marf1Q8BJ34 1730 aaKnown RBP29.52■■■□□ 2.32
Upf3a-201ENSMUST00000043767 Zfp142G5E869 1843 aa29.51■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Rab11fip3Q8CHD8 1047 aa29.51■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Arfgef2A2A5R2 1792 aa29.5■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Ccar1Q8CH18 1146 aaKnown RBP29.5■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Klhdc4Q921I2 584 aa29.5■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Rwdd1Q9CQK7 243 aa29.49■■■□□ 2.31
Upf3a-201ENSMUST00000043767 CastP51125 788 aa29.49■■■□□ 2.31
Upf3a-201ENSMUST00000043767 DiexfQ8BTT6 772 aaKnown RBP29.49■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Ddx54Q8K4L0 874 aaKnown RBP29.48■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Simc1E9Q6E9 1354 aa29.48■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Rtf1A2AQ19 715 aaKnown RBP29.48■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Gnai1B2RSH2 354 aa29.47■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Zranb3Q6NZP1 1069 aa29.47■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Gnai3Q9DC51 354 aa29.47■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Amotl1Q9D4H4 968 aa29.46■■■□□ 2.31
Upf3a-201ENSMUST00000043767 Slit1Q80TR4 1531 aa29.45■■■□□ 2.31
Upf3a-201ENSMUST00000043767 U2surpQ6NV83 1029 aaKnown RBP29.44■■■□□ 2.3
Retrieved 100 of 22,080 RNA–protein pairs in 138.7 ms