RNA–Protein interactions for RNA: ENSMUST00000036116.5

Ttc9-201, Transcript of Tetratricopeptide repeat protein 9A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ttc9, Length 2,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9-201ENSMUST00000036116 Rbm25B2RY56 838 aaKnown RBP29.4■■■□□ 2.3
Ttc9-201ENSMUST00000036116 TimelessQ9R1X4 1197 aa29.4■■■□□ 2.3
Ttc9-201ENSMUST00000036116 Scn4aQ9ER60 1841 aa29.4■■■□□ 2.3
Ttc9-201ENSMUST00000036116 Evi5lH3BKQ3 813 aa29.4■■■□□ 2.3
Ttc9-201ENSMUST00000036116 Trim58Q5NCC9 485 aa29.4■■■□□ 2.3
Ttc9-201ENSMUST00000036116 Kcna6Q61923 529 aa29.38■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Hoxc9P09633 260 aa29.37■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Polr3glQ8R0C0 218 aa29.37■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Slit2Q9R1B9 1521 aa29.36■■■□□ 2.29
Ttc9-201ENSMUST00000036116 PtprvP70289 1705 aa29.36■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Ccdc171E9Q1U1 1324 aa29.34■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Gnai1B2RSH2 354 aa29.34■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Trim26Q99PN3 545 aa29.34■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Gnai3Q9DC51 354 aa29.34■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Ecm2Q5FW85 670 aa29.33■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Wnk3Q80XP9 1757 aa29.33■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Eya1P97767 591 aa29.33■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Farp2Q91VS8 1065 aa29.33■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Ltbp4Q8K4G1 1666 aa29.33■■■□□ 2.29
Ttc9-201ENSMUST00000036116 Plin1Q8CGN5 517 aa29.32■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Cdc37l1Q9CZP7 335 aa29.32■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Pank1Q8K4K6 548 aa29.32■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Kcnh5Q920E3 988 aa29.32■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Znf521Q6KAS7 1311 aa29.31■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Ccne1Q61457 408 aa29.31■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Parp14Q2EMV9 1817 aa29.31■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Nfat5Q9WV30 1534 aa29.3■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Atf3Q60765 181 aa29.3■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Ptpn23Q6PB44 1692 aa29.29■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Pip4k2bQ80XI4 416 aa29.29■■■□□ 2.28
Ttc9-201ENSMUST00000036116 AampJ3QN89 436 aa29.28■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Supt16hQ920B9 1047 aa29.28■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Slc4a3P16283 1227 aa29.28■■■□□ 2.28
Ttc9-201ENSMUST00000036116 TmpoQ61033 693 aaKnown RBP29.28■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Kdm2bQ6P1G2 1309 aa29.28■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Ccdc60Q8C4J0 545 aa29.27■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Rab11fip3Q8CHD8 1047 aa29.27■■■□□ 2.28
Ttc9-201ENSMUST00000036116 Robo1O89026 1612 aa29.26■■■□□ 2.27
Ttc9-201ENSMUST00000036116 TatQ8QZR1 454 aa29.26■■■□□ 2.27
Ttc9-201ENSMUST00000036116 Tmem132eQ6IEE6 982 aa29.25■■■□□ 2.27
Ttc9-201ENSMUST00000036116 Sos1Q62245 1319 aa29.25■■■□□ 2.27
Ttc9-201ENSMUST00000036116 Tspyl2Q7TQI8 677 aa29.24■■■□□ 2.27
Ttc9-201ENSMUST00000036116 Zmym3Q9JLM4 1370 aa29.23■■■□□ 2.27
Ttc9-201ENSMUST00000036116 Fmnl2A2APV2 1086 aa29.21■■■□□ 2.27
Ttc9-201ENSMUST00000036116 Vamp4O70480 141 aa29.21■■■□□ 2.27
Ttc9-201ENSMUST00000036116 G3bp1P97855 465 aaKnown RBP29.21■■■□□ 2.27
Ttc9-201ENSMUST00000036116 GnpatP98192 678 aa29.21■■■□□ 2.27
Ttc9-201ENSMUST00000036116 Amigo3Q8C2S7 508 aa29.2■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Usp16Q99LG0 825 aa29.18■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Trpm3Q5F4S9 1721 aa29.18■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Dnajc10Q9DC23 793 aa29.18■■■□□ 2.26
Ttc9-201ENSMUST00000036116 HypkQ9CR41 129 aa29.17■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Siglec1Q62230 1695 aa29.16■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Kdm6aO70546 1401 aa29.15■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Dzip1Q8BMD2 852 aa29.15■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Gsdma3Q5Y4Y6 464 aa29.15■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Rtf1A2AQ19 715 aaKnown RBP29.14■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Plekhm2Q80TQ5 1018 aa29.14■■■□□ 2.26
Ttc9-201ENSMUST00000036116 Gm6268A2A3U9 297 aa29.13■■■□□ 2.25
Ttc9-201ENSMUST00000036116 TnrQ8BYI9 1358 aa29.13■■■□□ 2.25
Ttc9-201ENSMUST00000036116 Dixdc1Q80Y83 711 aa29.13■■■□□ 2.25
Ttc9-201ENSMUST00000036116 Cavin2Q63918 418 aaKnown RBP29.11■■■□□ 2.25
Ttc9-201ENSMUST00000036116 U2surpQ6NV83 1029 aaKnown RBP29.11■■■□□ 2.25
Ttc9-201ENSMUST00000036116 Liat1Q810M6 228 aa29.11■■■□□ 2.25
Ttc9-201ENSMUST00000036116 KarsQ99MN1 595 aaKnown RBP29.11■■■□□ 2.25
Ttc9-201ENSMUST00000036116 DccP70211 1447 aa29.1■■■□□ 2.25
Ttc9-201ENSMUST00000036116 Duxf3A0A0N4SV92 674 aa29.1■■■□□ 2.25
Ttc9-201ENSMUST00000036116 Klhdc4Q921I2 584 aa29.1■■■□□ 2.25
Ttc9-201ENSMUST00000036116 Tet3Q8BG87 1668 aa29.1■■■□□ 2.25
Ttc9-201ENSMUST00000036116 Smc5Q8CG46 1101 aaKnown RBP29.08■■■□□ 2.25
Ttc9-201ENSMUST00000036116 Ppp1r3fQ9JIG4 799 aa29.08■■■□□ 2.25
Ttc9-201ENSMUST00000036116 Nsd3Q6P2L6 1439 aa29.07■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Larp1bA0A0A6YXJ7 370 aaKnown RBP29.06■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Ddx17Q501J6 650 aaKnown RBP29.06■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Amotl2Q8K371 772 aa29.05■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Aldh1l1Q8R0Y6 902 aa29.05■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Amotl1Q9D4H4 968 aa29.04■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Brinp3Q499E0 766 aa29.04■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Tmco5bQ80X59 307 aa29.04■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Arfgef2A2A5R2 1792 aa29.04■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Q3UPC7 1272 aa29.03■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Nol11Q8BJW5 723 aaKnown RBP29.03■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Senp3Q9EP97 568 aaKnown RBP29.03■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Ahnak2E9PYB0 1738 aaKnown RBP29.03■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Ttll13A4Q9F6 804 aa29.03■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Maco1Q7TQE6 664 aaKnown RBP29.03■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Adgrb1Q3UHD1 1582 aa29.02■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Nid2O88322 1403 aa29.02■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Gli3Q61602 1583 aa29.02■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Snap23O09044 210 aa29.01■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Ggnbp2Q5SV77 696 aa29.01■■■□□ 2.24
Ttc9-201ENSMUST00000036116 Nectin2P32507 530 aa29.01■■■□□ 2.23
Ttc9-201ENSMUST00000036116 Fam71e1A1L3C1 212 aa28.99■■■□□ 2.23
Ttc9-201ENSMUST00000036116 Prim1P20664 417 aa28.99■■■□□ 2.23
Ttc9-201ENSMUST00000036116 MarsQ68FL6 902 aaKnown RBP28.99■■■□□ 2.23
Ttc9-201ENSMUST00000036116 Chmp5Q9D7S9 219 aa28.99■■■□□ 2.23
Ttc9-201ENSMUST00000036116 Nup153E9Q3G8 1462 aaKnown RBP28.99■■■□□ 2.23
Ttc9-201ENSMUST00000036116 Igsf1Q7TQA1 1317 aa28.98■■■□□ 2.23
Ttc9-201ENSMUST00000036116 Ppp1r37Q8BKR5 712 aa28.98■■■□□ 2.23
Ttc9-201ENSMUST00000036116 Znf330Q922H9 316 aa28.98■■■□□ 2.23
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms