RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Irf5P56477 497 aa18.4■□□□□ 0.54
Usp4-201ENSMUST00000035237 Atp10dQ8K2X1 1416 aa18.4■□□□□ 0.54
Usp4-201ENSMUST00000035237 Atp6v1dP57746 247 aa18.39■□□□□ 0.53
Usp4-201ENSMUST00000035237 Cdk19Q8BWD8 501 aa18.39■□□□□ 0.53
Usp4-201ENSMUST00000035237 Sytl4Q9R0Q1 673 aa18.39■□□□□ 0.53
Usp4-201ENSMUST00000035237 AatkQ80YE4 1365 aa18.39■□□□□ 0.53
Usp4-201ENSMUST00000035237 Glipr1l2Q9CQ35 332 aa18.39■□□□□ 0.53
Usp4-201ENSMUST00000035237 Mcm2P97310 904 aa18.38■□□□□ 0.53
Usp4-201ENSMUST00000035237 Nsd3Q6P2L6 1439 aa18.38■□□□□ 0.53
Usp4-201ENSMUST00000035237 Pdia3P27773 505 aaKnown RBP18.38■□□□□ 0.53
Usp4-201ENSMUST00000035237 Samd1D3YXK1 519 aa18.38■□□□□ 0.53
Usp4-201ENSMUST00000035237 Trim30aP15533 496 aa18.38■□□□□ 0.53
Usp4-201ENSMUST00000035237 Q3TQI7 289 aaKnown RBP18.38■□□□□ 0.53
Usp4-201ENSMUST00000035237 Ripk4Q9ERK0 786 aa18.37■□□□□ 0.53
Usp4-201ENSMUST00000035237 Erbb4Q61527 1308 aa18.37■□□□□ 0.53
Usp4-201ENSMUST00000035237 Cep170Q6A065 1588 aa18.37■□□□□ 0.53
Usp4-201ENSMUST00000035237 CenppQ9CZ92 286 aa18.37■□□□□ 0.53
Usp4-201ENSMUST00000035237 Anapc15-psA0A140T8L6 141 aa18.36■□□□□ 0.53
Usp4-201ENSMUST00000035237 Rtf1A2AQ19 715 aaKnown RBP18.36■□□□□ 0.53
Usp4-201ENSMUST00000035237 Tubgcp6G5E8P0 1769 aa18.36■□□□□ 0.53
Usp4-201ENSMUST00000035237 Pdcl2Q78Y63 240 aa18.36■□□□□ 0.53
Usp4-201ENSMUST00000035237 Tshz3Q8CGV9 1081 aa18.36■□□□□ 0.53
Usp4-201ENSMUST00000035237 Chd1lQ9CXF7 900 aa18.36■□□□□ 0.53
Usp4-201ENSMUST00000035237 InsrP15208 1372 aa18.36■□□□□ 0.53
Usp4-201ENSMUST00000035237 Prkar2bP31324 416 aa18.36■□□□□ 0.53
Usp4-201ENSMUST00000035237 Fchsd2Q3USJ8 740 aa18.35■□□□□ 0.53
Usp4-201ENSMUST00000035237 Zfp91Q62511 572 aa18.35■□□□□ 0.53
Usp4-201ENSMUST00000035237 Jakmip1Q8BVL9 626 aa18.35■□□□□ 0.53
Usp4-201ENSMUST00000035237 Bcar3Q9QZK2 820 aa18.35■□□□□ 0.53
Usp4-201ENSMUST00000035237 NcapgE9PWG6 1004 aa18.35■□□□□ 0.53
Usp4-201ENSMUST00000035237 Nucb1Q02819 459 aaKnown RBP18.35■□□□□ 0.53
Usp4-201ENSMUST00000035237 Polr3gQ6NXY9 223 aa18.35■□□□□ 0.53
Usp4-201ENSMUST00000035237 MpripP97434 1024 aa18.35■□□□□ 0.53
Usp4-201ENSMUST00000035237 Fam13aQ8BGI4 693 aa18.35■□□□□ 0.53
Usp4-201ENSMUST00000035237 Sf3a1Q8K4Z5 791 aaKnown RBP18.34■□□□□ 0.53
Usp4-201ENSMUST00000035237 NinlQ6ZQ12 1394 aa18.33■□□□□ 0.53
Usp4-201ENSMUST00000035237 AnkarA2RT91 1465 aa18.33■□□□□ 0.53
Usp4-201ENSMUST00000035237 Smarce1O54941 411 aaKnown RBP18.33■□□□□ 0.53
Usp4-201ENSMUST00000035237 Serpina10Q8R121 448 aa18.33■□□□□ 0.53
Usp4-201ENSMUST00000035237 Ppp6r3Q922D4 844 aa18.33■□□□□ 0.53
Usp4-201ENSMUST00000035237 Myo3aQ8K3H5 1613 aa18.33■□□□□ 0.53
Usp4-201ENSMUST00000035237 Ggnbp2Q5SV77 696 aa18.33■□□□□ 0.52
Usp4-201ENSMUST00000035237 Cyp27a1Q9DBG1 533 aa18.33■□□□□ 0.52
Usp4-201ENSMUST00000035237 Usp54Q8BL06 1588 aaKnown RBP18.32■□□□□ 0.52
Usp4-201ENSMUST00000035237 Cbx1P83917 185 aaKnown RBP18.32■□□□□ 0.52
Usp4-201ENSMUST00000035237 Aifm3Q3TY86 605 aa18.32■□□□□ 0.52
Usp4-201ENSMUST00000035237 Gm9992B2RWK3 458 aa18.32■□□□□ 0.52
Usp4-201ENSMUST00000035237 Unc93aQ710D3 458 aa18.32■□□□□ 0.52
Usp4-201ENSMUST00000035237 Slc52a2Q9D8F3 450 aa18.31■□□□□ 0.52
Usp4-201ENSMUST00000035237 Zscan25B2RX31 543 aa18.31■□□□□ 0.52
Usp4-201ENSMUST00000035237 Zkscan2G3X952 960 aa18.31■□□□□ 0.52
Usp4-201ENSMUST00000035237 Cfap74Q3UY96 1578 aa18.31■□□□□ 0.52
Usp4-201ENSMUST00000035237 Ccdc173A0JLY1 547 aa18.3■□□□□ 0.52
Usp4-201ENSMUST00000035237 PaskQ8CEE6 1383 aa18.3■□□□□ 0.52
Usp4-201ENSMUST00000035237 Brpf1B2RRD7 1212 aa18.3■□□□□ 0.52
Usp4-201ENSMUST00000035237 Samm50Q8BGH2 469 aa18.3■□□□□ 0.52
Usp4-201ENSMUST00000035237 KinQ8K339 391 aa18.3■□□□□ 0.52
Usp4-201ENSMUST00000035237 Gm973E9Q295 1059 aa18.29■□□□□ 0.52
Usp4-201ENSMUST00000035237 Sv2bQ8BG39 683 aa18.29■□□□□ 0.52
Usp4-201ENSMUST00000035237 Mad1l1Q9WTX8 717 aaKnown RBP18.29■□□□□ 0.52
Usp4-201ENSMUST00000035237 Cavin1O54724 392 aa18.29■□□□□ 0.52
Usp4-201ENSMUST00000035237 EvcP57680 1005 aa18.29■□□□□ 0.52
Usp4-201ENSMUST00000035237 Usp48Q3V0C5 1052 aa18.29■□□□□ 0.52
Usp4-201ENSMUST00000035237 Ncapd2Q8K2Z4 1392 aa18.29■□□□□ 0.52
Usp4-201ENSMUST00000035237 Kif1bQ60575 1816 aaKnown RBP18.29■□□□□ 0.52
Usp4-201ENSMUST00000035237 Stk3Q9JI10 497 aa18.29■□□□□ 0.52
Usp4-201ENSMUST00000035237 Srgap3Q812A2 1099 aa18.28■□□□□ 0.52
Usp4-201ENSMUST00000035237 Kif3aP28741 701 aa18.28■□□□□ 0.52
Usp4-201ENSMUST00000035237 Slc4a10Q5DTL9 1118 aa18.28■□□□□ 0.52
Usp4-201ENSMUST00000035237 Mcm3P25206 812 aaKnown RBP18.28■□□□□ 0.52
Usp4-201ENSMUST00000035237 Aldh8a1Q8BH00 487 aa18.28■□□□□ 0.52
Usp4-201ENSMUST00000035237 Setd1bQ8CFT2 1985 aa18.28■□□□□ 0.52
Usp4-201ENSMUST00000035237 AnlnQ8K298 1121 aaKnown RBP18.27■□□□□ 0.52
Usp4-201ENSMUST00000035237 Ubap1lG3UW59 384 aa18.27■□□□□ 0.52
Usp4-201ENSMUST00000035237 Tpd52l1O54818 204 aa18.27■□□□□ 0.52
Usp4-201ENSMUST00000035237 Rusc2Q80U22 1514 aa18.27■□□□□ 0.51
Usp4-201ENSMUST00000035237 Zkscan16A2ALW2 728 aa18.27■□□□□ 0.51
Usp4-201ENSMUST00000035237 Adam1bQ8R534 806 aa18.27■□□□□ 0.51
Usp4-201ENSMUST00000035237 Gys2Q8VCB3 704 aa18.27■□□□□ 0.51
Usp4-201ENSMUST00000035237 Nphp1Q9QY53 687 aa18.27■□□□□ 0.51
Usp4-201ENSMUST00000035237 Zbtb22Q9Z0G7 638 aa18.27■□□□□ 0.51
Usp4-201ENSMUST00000035237 Ptpdc1Q6NZK8 747 aa18.26■□□□□ 0.51
Usp4-201ENSMUST00000035237 Smc3Q9CW03 1217 aaKnown RBP18.26■□□□□ 0.51
Usp4-201ENSMUST00000035237 Cfap65Q3V0B4 1847 aa18.26■□□□□ 0.51
Usp4-201ENSMUST00000035237 AU022751B1B0V2 589 aa18.25■□□□□ 0.51
Usp4-201ENSMUST00000035237 Adcy5P84309 1262 aa18.25■□□□□ 0.51
Usp4-201ENSMUST00000035237 Mindy4Q3UQI9 744 aa18.25■□□□□ 0.51
Usp4-201ENSMUST00000035237 Cwc27Q3TKY6 469 aa18.25■□□□□ 0.51
Usp4-201ENSMUST00000035237 Pof1bQ8K4L4 587 aa18.25■□□□□ 0.51
Usp4-201ENSMUST00000035237 PalldQ9ET54 1408 aa18.24■□□□□ 0.51
Usp4-201ENSMUST00000035237 RdxP26043 583 aaKnown RBP18.24■□□□□ 0.51
Usp4-201ENSMUST00000035237 Pbrm1Q8BSQ9 1634 aaKnown RBP18.24■□□□□ 0.51
Usp4-201ENSMUST00000035237 Mknk2Q8CDB0 459 aa18.24■□□□□ 0.51
Usp4-201ENSMUST00000035237 Prune1Q8BIW1 454 aa18.24■□□□□ 0.51
Usp4-201ENSMUST00000035237 ScaperF8VQ70 1398 aaKnown RBP18.23■□□□□ 0.51
Usp4-201ENSMUST00000035237 Gnai2P08752 355 aaKnown RBP18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 Kdm4aQ8BW72 1064 aa18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 EngaseQ8BX80 734 aa18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 CrebrfQ8CDG5 640 aaKnown RBP18.22■□□□□ 0.51
Usp4-201ENSMUST00000035237 Lrrc7Q80TE7 1490 aa18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms