RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Sept3Q9Z1S5 350 aa6.96□□□□□ -1.3
Clk1-201ENSMUST00000034868 SelenovD3YXG1 328 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Adam7O35227 789 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Rnf40Q3U319 1001 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Slc10a4Q3UEZ8 437 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Slc27a5Q4LDG0 689 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Zbtb4Q5F293 982 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 MetrnQ8C1Q4 291 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 RragcQ99K70 398 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Rnaseh2aQ9CWY8 301 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Shroom2A2ALU4 1481 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Krtap4-2B1AQ85 167 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Zfp362B1ASA5 418 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Cspp1B2RX88 1205 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Il13ra1O09030 424 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 5730596B20RikQ8BQ08 205 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 NgefQ8CHT1 710 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Ndufb5Q9CQH3 189 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Lrrc46Q9DAP0 323 aa6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 Aebp2Q9Z248 504 aaKnown RBP6.95□□□□□ -1.3
Clk1-201ENSMUST00000034868 PtmaP26350 111 aa6.94□□□□□ -1.3
Clk1-201ENSMUST00000034868 Apex1P28352 317 aaKnown RBP6.94□□□□□ -1.3
Clk1-201ENSMUST00000034868 Gna15P30678 374 aa6.94□□□□□ -1.3
Clk1-201ENSMUST00000034868 Atp1a2Q6PIE5 1020 aa6.94□□□□□ -1.3
Clk1-201ENSMUST00000034868 Epb41l5Q8BGS1 731 aa6.94□□□□□ -1.3
Clk1-201ENSMUST00000034868 Dnttip2Q8R2M2 758 aaKnown RBP6.94□□□□□ -1.3
Clk1-201ENSMUST00000034868 4933402E13RikQ9D4D2 429 aa6.94□□□□□ -1.3
Clk1-201ENSMUST00000034868 Smpd1Q04519 627 aa6.93□□□□□ -1.3
Clk1-201ENSMUST00000034868 PtprnQ60673 979 aa6.93□□□□□ -1.3
Clk1-201ENSMUST00000034868 SkiQ60698 725 aa6.93□□□□□ -1.3
Clk1-201ENSMUST00000034868 Caskin2Q8VHK1 1201 aa6.93□□□□□ -1.3
Clk1-201ENSMUST00000034868 Edem1Q925U4 652 aa6.93□□□□□ -1.3
Clk1-201ENSMUST00000034868 Duxf3A0A0N4SV92 674 aa6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 Nbr1P97432 988 aa6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 Klra4Q60651 263 aa6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 Fkbp5Q64378 456 aa6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 Dhx38Q80X98 1228 aa6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 Fam50aQ9WV03 339 aaKnown RBP6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 Sh3bp1P55194 680 aa6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 EnahQ03173 802 aa6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 Rnpc3Q3UZ01 514 aaKnown RBP6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 Gtf2iQ9ESZ8 998 aaKnown RBP6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 ScribQ80U72 1612 aa6.92□□□□□ -1.3
Clk1-201ENSMUST00000034868 Cul9Q80TT8 1865 aa6.91□□□□□ -1.3
Clk1-201ENSMUST00000034868 Stox1B2RQL2 990 aa6.91□□□□□ -1.3
Clk1-201ENSMUST00000034868 Kif4P33174 1231 aa6.91□□□□□ -1.3
Clk1-201ENSMUST00000034868 Zfp91Q62511 572 aa6.91□□□□□ -1.3
Clk1-201ENSMUST00000034868 Setdb2Q8C267 713 aa6.91□□□□□ -1.3
Clk1-201ENSMUST00000034868 Pcdhb7Q8CDY9 829 aa6.91□□□□□ -1.3
Clk1-201ENSMUST00000034868 Zfp617Q91WM0 559 aa6.91□□□□□ -1.3
Clk1-201ENSMUST00000034868 Arid4aF8VPQ2 1261 aaKnown RBP6.9□□□□□ -1.3
Clk1-201ENSMUST00000034868 Kcnh2O35219 1162 aa6.9□□□□□ -1.3
Clk1-201ENSMUST00000034868 PurbO35295 324 aaKnown RBP6.9□□□□□ -1.3
Clk1-201ENSMUST00000034868 NeflP08551 543 aa6.9□□□□□ -1.3
Clk1-201ENSMUST00000034868 CalcaP70160 136 aa6.9□□□□□ -1.3
Clk1-201ENSMUST00000034868 Sparcl1P70663 650 aa6.9□□□□□ -1.3
Clk1-201ENSMUST00000034868 Utp3Q9JI13 469 aaKnown RBP6.9□□□□□ -1.3
Clk1-201ENSMUST00000034868 Cc2d2aQ8CFW7 1633 aa6.9□□□□□ -1.31
Clk1-201ENSMUST00000034868 Gm3264L7N2C5 238 aa6.9□□□□□ -1.31
Clk1-201ENSMUST00000034868 Scube3Q66PY1 993 aa6.9□□□□□ -1.31
Clk1-201ENSMUST00000034868 Eif4bQ8BGD9 611 aaKnown RBP6.9□□□□□ -1.31
Clk1-201ENSMUST00000034868 Mak16Q8BGS0 296 aaKnown RBP6.9□□□□□ -1.31
Clk1-201ENSMUST00000034868 4930504O13RikQ8C5Z9 145 aa6.9□□□□□ -1.31
Clk1-201ENSMUST00000034868 Tmco4Q91WU4 631 aa6.9□□□□□ -1.31
Clk1-201ENSMUST00000034868 Thap11Q9JJD0 305 aa6.9□□□□□ -1.31
Clk1-201ENSMUST00000034868 Dbn1Q9QXS6 706 aa6.9□□□□□ -1.31
Clk1-201ENSMUST00000034868 Klhl34A2AI76 644 aa6.89□□□□□ -1.31
Clk1-201ENSMUST00000034868 Sbk3P0C5K0 361 aa6.89□□□□□ -1.31
Clk1-201ENSMUST00000034868 Pak2Q8CIN4 524 aa6.89□□□□□ -1.31
Clk1-201ENSMUST00000034868 Gigyf1Q99MR1 1044 aaKnown RBP6.89□□□□□ -1.31
Clk1-201ENSMUST00000034868 Smad7O35253 426 aa6.88□□□□□ -1.31
Clk1-201ENSMUST00000034868 Psmd1Q3TXS7 953 aa6.88□□□□□ -1.31
Clk1-201ENSMUST00000034868 Fmr1nbQ80ZA7 238 aa6.88□□□□□ -1.31
Clk1-201ENSMUST00000034868 Dennd6aQ8BH65 605 aa6.88□□□□□ -1.31
Clk1-201ENSMUST00000034868 Ppp1r18Q8BQ30 594 aa6.88□□□□□ -1.31
Clk1-201ENSMUST00000034868 VgfQ0VGU4 617 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Fam196bQ6GQV1 535 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Fam43aQ8BUP8 424 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Chmp4bQ9D8B3 224 aaKnown RBP6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 DmtnQ9WV69 405 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Gm36176A0A1W2P8D5 158 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 UprtB1AVZ0 310 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 PtpreP49446 699 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Lrfn1Q2WF71 766 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Phf12Q5SPL2 1003 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Fzd6Q61089 709 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Trak2Q6P9N8 913 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Exoc8Q6PGF7 716 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Traf7Q922B6 594 aa6.87□□□□□ -1.31
Clk1-201ENSMUST00000034868 Rnf19aP50636 840 aa6.86□□□□□ -1.31
Clk1-201ENSMUST00000034868 Gpbp1l1Q6NZP2 473 aa6.86□□□□□ -1.31
Clk1-201ENSMUST00000034868 Ssuh2Q8C3L1 340 aa6.86□□□□□ -1.31
Clk1-201ENSMUST00000034868 Asb16Q8VHS5 453 aa6.86□□□□□ -1.31
Clk1-201ENSMUST00000034868 Tgm5Q9D7I9 724 aa6.86□□□□□ -1.31
Clk1-201ENSMUST00000034868 SetQ9EQU5 289 aaKnown RBP6.86□□□□□ -1.31
Clk1-201ENSMUST00000034868 Mapk8ip1Q9WVI9 707 aa6.86□□□□□ -1.31
Clk1-201ENSMUST00000034868 Arhgef5E9Q7D5 1581 aa6.86□□□□□ -1.31
Clk1-201ENSMUST00000034868 Upf2A2AT37 1269 aaKnown RBP6.85□□□□□ -1.31
Clk1-201ENSMUST00000034868 Skor2A7M7C7 1008 aa6.85□□□□□ -1.31
Clk1-201ENSMUST00000034868 Map3k9Q3U1V8 1077 aa6.85□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms