RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Camsap2Q8C1B1 1461 aa21.93■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Rufy1Q8BIJ7 712 aa21.92■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Cbx1P83917 185 aaKnown RBP21.92■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Cwc15Q9JHS9 229 aaKnown RBP21.92■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Mcm3P25206 812 aaKnown RBP21.92■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Slc52a2Q9D8F3 450 aa21.92■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Catsper2A2ARP9 588 aa21.91■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Ppp6r1Q7TSI3 856 aa21.91■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Exoc6bA6H5Z3 810 aa21.91■■□□□ 1.1
Ebf3-201ENSMUST00000033378 MlecQ6ZQI3 291 aaKnown RBP21.91■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Rbm28Q8CGC6 750 aaKnown RBP21.91■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Dhx16G3X8X0 1044 aaKnown RBP21.9■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Wdr63B2RY71 923 aa21.9■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Sos1Q62245 1319 aa21.9■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Hoxa7P02830 229 aa21.9■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Vps53Q8CCB4 832 aa21.9■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Trim29Q8R2Q0 587 aa21.9■■□□□ 1.1
Ebf3-201ENSMUST00000033378 Cfap58B2RW38 873 aa21.89■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Gjb2Q00977 226 aa21.89■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Ift57Q8BXG3 429 aa21.89■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Odf2lQ9D478 642 aa21.89■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Ttc21bQ0HA38 1315 aa21.88■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Zmym4A2A791 1549 aaKnown RBP21.88■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Cnnm1Q0GA42 951 aa21.88■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Ankrd26Q811D2 1581 aa21.88■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Hvcn1Q3U2S8 269 aa21.88■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Nkx1-2P42580 305 aa21.87■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Smc2Q8CG48 1191 aaKnown RBP21.87■■□□□ 1.09
Ebf3-201ENSMUST00000033378 SelenooQ9DBC0 667 aa21.87■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Bag1Q60739 355 aa21.87■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Ccdc102aQ3TMW1 549 aa21.87■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Otud6bQ8K2H2 294 aa21.87■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Fsd1Q7TPM6 496 aa21.86■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Ppp1r42Q8R1Z4 357 aa21.86■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Slc12a5Q91V14 1138 aa21.86■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Magi1Q6RHR9 1471 aa21.86■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Fgd6Q69ZL1 1399 aa21.86■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Pabpn1Q8CCS6 302 aaKnown RBP21.86■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Fam43aQ8BUP8 424 aa21.86■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Gse1Q3U3C9 1213 aa21.85■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Zbtb22Q9Z0G7 638 aa21.85■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Brf1Q8CFK2 676 aa21.85■■□□□ 1.09
Ebf3-201ENSMUST00000033378 DroshaQ5HZJ0 1373 aaKnown RBP21.85■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Anapc15-psA0A140T8L6 141 aa21.85■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Rhot2Q8JZN7 620 aa21.85■■□□□ 1.09
Ebf3-201ENSMUST00000033378 SynmQ70IV5 1561 aa21.84■■□□□ 1.09
Ebf3-201ENSMUST00000033378 SrrtQ99MR6 875 aaKnown RBP21.84■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Bcar3Q9QZK2 820 aa21.84■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Eif5P59325 429 aaKnown RBP21.84■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Irgm2A0A140LIF8 407 aa21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Prpf4bQ61136 1007 aaKnown RBP21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Dhx8A2A4P0 1244 aaKnown RBP21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Agtpbp1Q641K1 1218 aa21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Necab1Q8BG18 352 aa21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 OptnQ8K3K8 584 aa21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Wdr33Q8K4P0 1330 aaKnown RBP21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 EvcP57680 1005 aa21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Dennd6aQ8BH65 605 aa21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 TefQ9JLC6 301 aa21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Sytl4Q9R0Q1 673 aa21.83■■□□□ 1.09
Ebf3-201ENSMUST00000033378 Ankrd44B2RXR6 993 aa21.83■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Pdcl2Q78Y63 240 aa21.82■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Mrvi1Q9WUX5 899 aaKnown RBP21.82■■□□□ 1.08
Ebf3-201ENSMUST00000033378 RalgapbQ8BQZ4 1484 aa21.82■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Abl1P00520 1123 aa21.82■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Ppp1r15aP17564 657 aa21.82■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Rbm27Q5SFM8 1060 aaKnown RBP21.82■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Slu7Q8BHJ9 585 aa21.82■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Cavin1O54724 392 aa21.81■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Plb1Q3TTY0 1478 aa21.81■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Zranb3Q6NZP1 1069 aa21.81■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Adcy5P84309 1262 aa21.81■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Nat10Q8K224 1024 aaKnown RBP21.81■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Eif3aP23116 1344 aaKnown RBP21.81■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Ddx19aQ61655 478 aaKnown RBP21.81■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Dnaaf4Q8R368 420 aa21.8■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Znf771Q8BJ90 317 aa21.8■■□□□ 1.08
Ebf3-201ENSMUST00000033378 NinlQ6ZQ12 1394 aa21.8■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Kif3cO35066 796 aa21.8■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Gm14025A2AP89 1413 aa21.8■■□□□ 1.08
Ebf3-201ENSMUST00000033378 TnikP83510 1323 aa21.8■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Nap1l1P28656 391 aaKnown RBP21.8■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Afap1Q80YS6 731 aa21.8■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Lamb3Q61087 1168 aa21.79■■□□□ 1.08
Ebf3-201ENSMUST00000033378 March6Q6ZQ89 909 aa21.79■■□□□ 1.08
Ebf3-201ENSMUST00000033378 KdrP35918 1367 aa21.79■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Hap1O35668 628 aa21.79■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Q4VA45 678 aa21.79■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Stard3nlQ9DCI3 235 aa21.79■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Aplp1Q03157 653 aa21.78■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Tshz3Q8CGV9 1081 aa21.78■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Gm10093D3YYI8 482 aa21.78■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Hdac1O09106 482 aaKnown RBP21.78■■□□□ 1.08
Ebf3-201ENSMUST00000033378 BicraF8VPZ9 1578 aa21.78■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Cep112Q5PR68 954 aa21.77■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Spag5Q7TME2 1165 aa21.77■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Cct4P80315 539 aaKnown RBP21.77■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Gnl2Q99LH1 728 aaKnown RBP21.77■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Strn4P58404 760 aa21.77■■□□□ 1.08
Ebf3-201ENSMUST00000033378 Fam135aQ6NS59 1506 aa21.77■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms