RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 PalldQ9ET54 1408 aa14.22□□□□□ -0.13
Sdc1-201ENSMUST00000020911 1700017N19RikA0A087WPJ1 469 aa14.22□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Knl1Q66JQ7 1612 aa14.22□□□□□ -0.13
Sdc1-201ENSMUST00000020911 AdgbG3UZ78 1657 aa14.22□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Mindy4Q3UQI9 744 aa14.22□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Efcab6Q6P1E8 1516 aa14.22□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Apaf1O88879 1249 aa14.22□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Rbm27Q5SFM8 1060 aaKnown RBP14.22□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Tbc1d32Q3URV1 1296 aa14.21□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Txndc2Q6P902 515 aa14.21□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Rbm42Q91V81 474 aaKnown RBP14.21□□□□□ -0.13
Sdc1-201ENSMUST00000020911 GsdmaQ9EST1 446 aa14.21□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Myom2Q14BI5 1463 aa14.21□□□□□ -0.13
Sdc1-201ENSMUST00000020911 Zfp251Q6PCX8 632 aa14.21□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Tmx3Q8BXZ1 456 aa14.21□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Atxn3Q9CVD2 355 aa14.2□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Gas2l2Q5SSG4 860 aa14.2□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Rlbp1Q9Z275 317 aa14.2□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Gpatch11Q3UFS4 262 aa14.2□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Irx2P81066 474 aa14.19□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Tsen2Q6P7W5 460 aa14.19□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Rnf214Q8BFU3 668 aaKnown RBP14.19□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Dmrt2Q8BG36 561 aa14.19□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Pank1Q8K4K6 548 aa14.19□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Ppp2r3aB2RXC8 1150 aa14.19□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Capn2O08529 700 aa14.19□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Nfatc2ipO09130 412 aa14.18□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Chrm1P12657 460 aa14.18□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Psme1P97371 249 aa14.18□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Akap12Q9WTQ5 1684 aa14.18□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Uggt1Q6P5E4 1551 aa14.18□□□□□ -0.14
Sdc1-201ENSMUST00000020911 P2rx7Q9Z1M0 595 aa14.18□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Hfm1D3Z4R1 1434 aa14.17□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Kiaa1107Q80TK0 1369 aa14.17□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Speer4f2E9Q366 295 aa14.17□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Cdk19Q8BWD8 501 aa14.17□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Kif2cQ922S8 721 aa14.17□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Gsto1O09131 240 aa14.17□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Dnajc5gQ8C632 165 aa14.16□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Senp3Q9EP97 568 aaKnown RBP14.16□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Atf7ipQ7TT18 1306 aa14.16□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Usp19Q3UJD6 1360 aa14.16□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Synj2Q9D2G5 1434 aa14.16□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Cavin1O54724 392 aa14.16□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Ptgs1P22437 602 aa14.16□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Rsph3aQ3UFY4 516 aa14.16□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Kiaa0754Q69ZZ9 979 aa14.16□□□□□ -0.14
Sdc1-201ENSMUST00000020911 InsrP15208 1372 aa14.15□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Zscan25B2RX31 543 aa14.15□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Birc3O08863 600 aa14.15□□□□□ -0.14
Sdc1-201ENSMUST00000020911 RbsnQ80Y56 783 aa14.15□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Anapc15-psA0A140T8L6 141 aa14.15□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Brpf1B2RRD7 1212 aa14.15□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Ccdc96Q9CR92 584 aa14.15□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Plekhh1Q80TI1 1356 aa14.15□□□□□ -0.14
Sdc1-201ENSMUST00000020911 Ino80Q6ZPV2 1559 aa14.14□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Ncbp1Q3UYV9 790 aaKnown RBP14.14□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Tecpr2Q3UH45 1423 aa14.14□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Mroh1E0CZ22 1640 aa14.13□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Zmym3Q9JLM4 1370 aa14.13□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Rcan3Q9JKK0 239 aa14.13□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Ica1lQ3TY65 431 aa14.12□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Uspl1Q3ULM6 1089 aa14.12□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Ksr2Q3UVC0 959 aa14.12□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Cluap1Q8R3P7 413 aa14.12□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Ahdc1Q6PAL7 1594 aaKnown RBP14.12□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Kif3aP28741 701 aa14.12□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Cep170bQ80U49 1574 aa14.12□□□□□ -0.15
Sdc1-201ENSMUST00000020911 IbtkQ6ZPR6 1352 aaKnown RBP14.11□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Znf771Q8BJ90 317 aa14.11□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Bloc1s4Q8VED2 215 aa14.11□□□□□ -0.15
Sdc1-201ENSMUST00000020911 NpatQ8BMA5 1420 aa14.11□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Scaf11E9PZM7 1456 aaKnown RBP14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Sparcl1P70663 650 aa14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Gripap1Q8VD04 806 aa14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Trpm1Q2TV84 1622 aa14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 DnmbpQ6TXD4 1580 aa14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Nxf2Q4ZGD8 691 aa14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Ralbp1Q62172 648 aa14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Prdm2A2A7B5 1709 aaKnown RBP14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 NinlQ6ZQ12 1394 aa14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Gprasp1Q5U4C1 1347 aa14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Nol7Q9D7Z3 254 aaKnown RBP14.1□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Fam177a1Q8BR63 207 aa14.09□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Kiaa0556Q8C753 1610 aa14.09□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Duxf3A0A0N4SV92 674 aa14.09□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Kcng1A2BDX4 514 aa14.09□□□□□ -0.15
Sdc1-201ENSMUST00000020911 4931400O07RikQ9D4M5 137 aa14.09□□□□□ -0.15
Sdc1-201ENSMUST00000020911 Inpp5bQ8K337 993 aa14.08□□□□□ -0.15
Sdc1-201ENSMUST00000020911 PtprmP28828 1452 aa14.08□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Hecw2Q6I6G8 1578 aa14.08□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Plxnc1Q9QZC2 1574 aa14.08□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Syce3B5KM66 88 aa14.08□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Bag4Q8CI61 457 aa14.08□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Gm9992B2RWK3 458 aa14.08□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Unc93aQ710D3 458 aa14.08□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Sass6Q80UK7 654 aa14.08□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Ercc6l2Q9JIM3 1537 aa14.07□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Myom1Q62234 1667 aaKnown RBP14.07□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Ttc37F8VPK0 1563 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms