RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 ULK1O75385 1050 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 SPATA31D3P0C874 917 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 CAPZA2P47755 286 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 DCTN2Q13561 401 aaKnown RBP12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 NEDD8Q15843 81 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 SPATA31D4Q6ZUB0 917 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 SIX5Q8N196 739 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 TMEM132CQ8N3T6 1108 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 SPPL2BQ8TCT7 592 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 DQX1Q8TE96 717 aaKnown RBP12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 KCTD15Q96SI1 283 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 TTPALQ9BTX7 342 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 RHOJQ9H4E5 214 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 CHRAC1Q9NRG0 131 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 TMPRSS4Q9NRS4 437 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 OR6C75A6NL08 312 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 PSME3P61289 254 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 TRIM16LQ309B1 348 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 CCDC157Q569K6 752 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 FNBP1LQ5T0N5 605 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 CNSTQ6PJW8 725 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 UBE2Q1Q7Z7E8 422 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 DEFB118Q96PH6 123 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 UGT2B28Q9BY64 529 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 TMA7Q9Y2S6 64 aaKnown RBP12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 COQ4Q9Y3A0 265 aa12.59□□□□□ -0.39
TNFAIP3-206ENST00000612899 FGF1P05230 155 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 LPCAT2Q7L5N7 544 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 AMIGO3Q86WK7 504 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 OR4L1Q8NH43 312 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 SYT17Q9BSW7 474 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 DCUN1D5Q9BTE7 237 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 ACSS2Q9NR19 701 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 KLHL28Q9NXS3 571 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 EURLQ9NYK6 297 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 FBXO10Q9UK96 956 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 STXBP5LQ9Y2K9 1186 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 URB1O60287 2271 aaKnown RBP12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 SNTNA6NMZ2 147 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 BIRC5O15392 142 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 BPGMP07738 259 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 COX7A2P14406 83 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 AIF1P55008 147 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 FSTL1Q12841 308 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 CPSF6Q16630 551 aaKnown RBP eCLIP12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 SLC24A5Q71RS6 500 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 ANKRD23Q86SG2 305 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 RCN3Q96D15 328 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 GMIPQ9P107 970 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 MON2Q7Z3U7 1717 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 MYBPHLA2RUH7 354 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 PRR5-ARHGAP8B1AHC4 643 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 CD3EAPO15446 510 aaKnown RBP12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 GABRR2P28476 465 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 MAPK8P45983 427 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 NDUFV1P49821 464 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 SLC5A3P53794 718 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 ARHGAP8P85298 464 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 SEMA5AQ13591 1074 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 INSCQ1MX18 579 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 MFSD5Q6N075 450 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 CCDC185Q8N715 623 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 HJURPQ8NCD3 748 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 MFSD3Q96ES6 412 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 PHACTR1Q9C0D0 580 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 AGO3Q9H9G7 860 aaKnown RBP12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 ARHGEF4Q9NR80 690 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 RAD18Q9NS91 495 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 COMMD3-BMI1R4GMX3 469 aa12.58□□□□□ -0.4
TNFAIP3-206ENST00000612899 LRIG2O94898 1065 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 LMO2P25791 158 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 TUBA1BP68363 451 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 SPIRE1Q08AE8 756 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 SERPINA13PQ6UXR4 307 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 TUBA1AQ71U36 451 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 BBS4Q96RK4 519 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 C1orf50Q9BV19 199 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 WDR55Q9H6Y2 383 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 GNPTGQ9UJJ9 305 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 FAM220BPB1ANY3 271 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 TNFAIP8O95379 198 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 GSNP06396 782 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 TKTP29401 623 aaKnown RBP12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 PTDSS1P48651 473 aaKnown RBP12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 EIF2B2P49770 351 aaKnown RBP12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 MAPKAPK3Q16644 382 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 FGD3Q5JSP0 725 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 VSTM1Q6UX27 236 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 OMA1Q96E52 524 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 PCED1BQ96HM7 432 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 C9orf16Q9BUW7 83 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 VPS51Q9UID3 782 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 MKL2Q9ULH7 1088 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 DUSP11O75319 330 aaKnown RBP12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 MLYCDO95822 493 aa12.57□□□□□ -0.4
TNFAIP3-206ENST00000612899 SERPINA6P08185 405 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms