RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SAT1P21673 171 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 CSKP41240 450 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 USP10Q14694 798 aaKnown RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 GALNTL6Q49A17 601 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 ZNF789Q5FWF6 425 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 PPM1LQ5SGD2 360 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 ATG16L1Q676U5 607 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 ZCCHC23Q6ZST2 131 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 RAB3IL1Q8TBN0 382 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 PHOSPHO2Q8TCD6 241 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 BLOC1S5Q8TDH9 187 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 HDAC10Q969S8 669 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 C17orf80Q9BSJ5 609 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 C20orf27Q9GZN8 174 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 SCUBE2Q9NQ36 999 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 ASAH2Q9NR71 780 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 DCTN4Q9UJW0 460 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 ARL5AQ9Y689 179 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 TYW5A2RUC4 315 aaKnown RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 PHGDHO43175 533 aaKnown RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 RFPL2O75678 378 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 ARHGEF15O94989 841 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 PRLP01236 227 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 FGF3P11487 239 aaPredicted RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 KCNA4P22459 653 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 SCTRP47872 440 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 OCRLQ01968 901 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 ACTN3Q08043 901 aaPredicted RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 PTPRCAPQ14761 206 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 DBN1Q16643 649 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 MBLAC2Q68D91 279 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 NLRP9Q7RTR0 991 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 PNPLA1Q8N8W4 532 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 TDRD5Q8NAT2 981 aaKnown RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 NUDCD1Q96RS6 583 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 TRIM55Q9BYV6 548 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 SMG9Q9H0W8 520 aaKnown RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 ACTR5Q9H9F9 607 aaPredicted RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 FBXO6Q9NRD1 293 aaPredicted RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.97■□□□□ 0.31
SREK1-212ENST00000522912 VPS28Q9UK41 221 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 SH3BP1Q9Y3L3 701 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 NOTCH4Q99466 2003 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 FAM95CA0A1B0GW59 222 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 LINC01553A4QN01 128 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 LEFTY2O00292 366 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 SLC7A4O43246 635 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 BUD23O43709 281 aaKnown RBP16.96■□□□□ 0.31
SREK1-212ENST00000522912 SNNO75324 88 aaPredicted RBP16.96■□□□□ 0.31
SREK1-212ENST00000522912 FSBPO95073 299 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 TGDSO95455 350 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 AVPR1AP37288 418 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 CD151P48509 253 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 ACVR1Q04771 509 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 CDH18Q13634 790 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 CCDC153Q494R4 210 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 CNSTQ6PJW8 725 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 KIAA0408Q6ZU52 694 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 PTAR1Q7Z6K3 402 aaPredicted RBP16.96■□□□□ 0.31
SREK1-212ENST00000522912 C10orf107Q8IVU9 208 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 CPXM2Q8N436 756 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 SHKBP1Q8TBC3 707 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 BRSK1Q8TDC3 778 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 DDI1Q8WTU0 396 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 TCEAL4Q96EI5 215 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 C7orf26Q96N11 449 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 GCNAQ96QF7 691 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 C1QTNF1Q9BXJ1 281 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 MFSD1Q9H3U5 465 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 KCNK13Q9HB14 408 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 TLR9Q9NR96 1032 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 DNMT3BQ9UBC3 853 aaKnown RBP16.96■□□□□ 0.31
SREK1-212ENST00000522912 COPG2Q9UBF2 871 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 LHX3Q9UBR4 397 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 VPS51Q9UID3 782 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 CLEC4EQ9ULY5 219 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 MYOFQ9NZM1 2061 aa16.96■□□□□ 0.31
SREK1-212ENST00000522912 OR51F1A6NGY5 319 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 SLC35E2BP0CK96 405 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 STX3Q13277 289 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 RAPH1Q70E73 1250 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 CEP97Q8IW35 865 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 C10orf67Q8IYJ2 551 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 TNS4Q8IZW8 715 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 APCDD1Q8J025 514 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 OR6P1Q8NGX9 317 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 ZNF398Q8TD17 642 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 CALML6Q8TD86 181 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 DNAJC1Q96KC8 554 aaKnown RBP16.96■□□□□ 0.3
SREK1-212ENST00000522912 TBATAQ96M53 351 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 SUDS3Q9H7L9 328 aaPredicted RBP16.96■□□□□ 0.3
SREK1-212ENST00000522912 PLK2Q9NYY3 685 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 SLC12A4Q9UP95 1085 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 ZNF510Q9Y2H8 683 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 SPO11Q9Y5K1 396 aa16.96■□□□□ 0.3
SREK1-212ENST00000522912 PDHA1P08559 390 aa16.95■□□□□ 0.3
SREK1-212ENST00000522912 DLDP09622 509 aaKnown RBP16.95■□□□□ 0.3
SREK1-212ENST00000522912 MYOGP15173 224 aa16.95■□□□□ 0.3
SREK1-212ENST00000522912 CES1P23141 567 aa16.95■□□□□ 0.3
SREK1-212ENST00000522912 IRS1P35568 1242 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms