RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 KDM7AQ6ZMT4 941 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 DBX2Q6ZNG2 339 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 SRLQ86TD4 932 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 SLCO6A1Q86UG4 719 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 CAMK1DQ8IU85 385 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 CHCHD4Q8N4Q1 142 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 LZTR1Q8N653 840 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 TMEM145Q8NBT3 493 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 KCTD6Q8NC69 237 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 TRIM58Q8NG06 486 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 OR13H1Q8NG92 308 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 SLC35G2Q8TBE7 412 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 WRAP53Q9BUR4 548 aaKnown RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 CINPQ9BW66 212 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-221ENST00000477561 CALN1Q9BXU9 219 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 OSBPL1AQ9BXW6 950 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 LACRTQ9GZZ8 138 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 SUV39H2Q9H5I1 410 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 UVRAGQ9P2Y5 699 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 ANGPTL2Q9UKU9 493 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 PCDHGB2Q9Y5G2 931 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 CACNA1EQ15878 2313 aa8.37□□□□□ -1.07
HDAC6-221ENST00000477561 DOCK9Q9BZ29 2069 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 MACROD2A1Z1Q3 448 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 POM121BA6NF01 834 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 AREL1O15033 823 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 FLRT2O43155 660 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 TSPAN6O43657 245 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 AP1G1O43747 822 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 DFNA5O60443 496 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 MAGEC1O60732 1142 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 MAP3K6O95382 1288 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 ATXN1LP0C7T5 689 aaKnown RBP8.36□□□□□ -1.07
HDAC6-221ENST00000477561 FTH1P19P0C7X4 201 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 XPAP23025 273 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-221ENST00000477561 GRK6P43250 576 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 SCNN1BP51168 640 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 ARSEP51690 589 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 SGCGQ13326 291 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 TUBB2AQ13885 445 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 HNRNPDQ14103 355 aaKnown RBP8.36□□□□□ -1.07
HDAC6-221ENST00000477561 DPYSL3Q14195 570 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 LBRQ14739 615 aaKnown RBP8.36□□□□□ -1.07
HDAC6-221ENST00000477561 ZNF542PQ5EBM4 170 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 CFAP58Q5T655 872 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 KIAA1161Q6NSJ0 714 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 GCNT7Q6ZNI0 430 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 Q6ZSR6 202 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 PTAR1Q7Z6K3 402 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-221ENST00000477561 IQCHQ86VS3 1027 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 ZSWIM9Q86XI8 627 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 RHOT2Q8IXI1 618 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 EID2Q8N6I1 236 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 PAF1Q8N7H5 531 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 CXorf40AQ8TE69 158 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 LRRN4Q8WUT4 740 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 TSC1Q92574 1164 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 RAB7BQ96AH8 199 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 BMFQ96LC9 184 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 NSMCE3Q96MG7 304 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 TUBB2BQ9BVA1 445 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 SCNM1Q9BWG6 230 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 CPEB1Q9BZB8 566 aaKnown RBP8.36□□□□□ -1.07
HDAC6-221ENST00000477561 TRIM10Q9UDY6 481 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 KLK13Q9UKR3 277 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 COQ6Q9Y2Z9 468 aa8.36□□□□□ -1.07
HDAC6-221ENST00000477561 A0A0U1RQJ8 604 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 CTAGE9A4FU28 777 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 A8MX80 341 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 MFSD11O43934 449 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 PCDHGA12O60330 932 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 MAFKO60675 156 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 PEX11BO96011 259 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 EPHA8P29322 1005 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-221ENST00000477561 NOP2P46087 812 aaKnown RBP8.35□□□□□ -1.07
HDAC6-221ENST00000477561 ARRB1P49407 418 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-221ENST00000477561 MAXP61244 160 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 BCL2L1Q07817 233 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 OVGP1Q12889 678 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 ZNF235Q14590 738 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 RFTN1Q14699 578 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-221ENST00000477561 TCEAL1Q15170 157 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 UGP2Q16851 508 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 ANKRD20A8PQ5CZ79 823 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 FAM182AQ5T1J6 154 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 TMCO4Q5TGY1 634 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 ABI3BPQ7Z7G0 1075 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 SYCE1Q8N0S2 351 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 SLC22A18ASQ8N1D0 253 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 PGBD5Q8N414 524 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 ATPAF2Q8N5M1 289 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.35□□□□□ -1.07
HDAC6-221ENST00000477561 PCDH19Q8TAB3 1148 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 BAHD1Q8TBE0 780 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-221ENST00000477561 FAM71BQ8TC56 605 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 SAP25Q8TEE9 199 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 UBE2Q2Q8WVN8 375 aa8.35□□□□□ -1.07
HDAC6-221ENST00000477561 RFFLQ8WZ73 363 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms