RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SLC39A11Q8N1S5 342 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 TTC39CQ8N584 583 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 KIAA0895Q8NCT3 520 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 ZNF540Q8NDQ6 660 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 ENGASEQ8NFI3 743 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 ELOA3Q8NG57 546 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 CFAP61Q8NHU2 1237 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 CSGALNACT1Q8TDX6 532 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 RNF141Q8WVD5 230 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 SCFD1Q8WVM8 642 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 DLG3Q92796 817 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 AZIN2Q96A70 460 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 C18orf25Q96B23 403 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-202ENST00000409915 ZNF764Q96H86 408 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-202ENST00000409915 SNX27Q96L92 541 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 FBXL18Q96ME1 805 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 SAMD11Q96NU1 681 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 TRAPPC9Q96Q05 1148 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 ACCSQ96QU6 501 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 SMC6Q96SB8 1091 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 RUFY1Q96T51 708 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 SH3GL1Q99961 368 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 CBWD1Q9BRT8 395 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 MSTO1Q9BUK6 570 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 JAM3Q9BX67 310 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 PLVAPQ9BX97 442 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 MRPL46Q9H2W6 279 aaKnown RBP4.67□□□□□ -1.66
SF3B1-202ENST00000409915 ST6GALNAC4Q9H4F1 302 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 TMEM8AQ9HCN3 771 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 DMAP1Q9NPF5 467 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-202ENST00000409915 NECTIN3Q9NQS3 549 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 CHST7Q9NS84 486 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 RAD18Q9NS91 495 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 PNPOQ9NVS9 261 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 MARCH5Q9NX47 278 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 SPG21Q9NZD8 308 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 COQ3Q9NZJ6 369 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 PAIP2BQ9ULR5 123 aaKnown RBP4.67□□□□□ -1.66
SF3B1-202ENST00000409915 SLC6A14Q9UN76 642 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 ZNF281Q9Y2X9 895 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 RWDD3Q9Y3V2 267 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 USP15Q9Y4E8 981 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-202ENST00000409915 PCDHA3Q9Y5H8 950 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 N6AMT1Q9Y5N5 214 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 BZW2Q9Y6E2 419 aaKnown RBP4.67□□□□□ -1.66
SF3B1-202ENST00000409915 PIAS3Q9Y6X2 628 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 ATG2AQ2TAZ0 1938 aa4.67□□□□□ -1.66
SF3B1-202ENST00000409915 RALGAPA2Q2PPJ7 1873 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 SMIM28A0A1B0GU29 152 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 CLCA1A8K7I4 914 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 HIDE1A8MVS5 230 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 LACTBL1A8MY62 500 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 PTGES3LE9PB15 166 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 I3L4J1 428 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 LINC01387J3KSC0 135 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 M0R082 166 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 NRP1O14786 923 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 CAPN9O14815 690 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 PPEF2O14830 753 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 PER2O15055 1255 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 VILLO15195 856 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 OGTO15294 1046 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 INPPL1O15357 1258 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 LINC01565O15544 149 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 TGFB1I1O43294 461 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 FMO6PO60774 539 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 SIN3BO75182 1162 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 APOL3O95236 402 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 PRAMEF1O95521 474 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 MT-ND5P03915 603 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 RB1P06400 928 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 CLTAP09496 248 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 TROVE2P10155 538 aaKnown RBP eCLIP4.66□□□□□ -1.66
SF3B1-202ENST00000409915 COL6A2P12110 1019 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 TYRP14679 529 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 TRIM21P19474 475 aaKnown RBP4.66□□□□□ -1.66
SF3B1-202ENST00000409915 HLA-DPA1P20036 260 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 TGM1P22735 817 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 ALDH3A1P30838 453 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 ALDH7A1P49419 539 aaKnown RBP4.66□□□□□ -1.66
SF3B1-202ENST00000409915 CYP2J2P51589 502 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 CLCNKBP51801 687 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 POLE2P56282 527 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 NLRP12P59046 1061 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 TFF2Q03403 129 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 EPS8Q12929 822 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 ADAM9Q13443 819 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 LSAMPQ13449 338 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 CASP8Q14790 479 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 ADIPOQQ15848 244 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 ADRM1Q16186 407 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 CAMK4Q16566 473 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 WHAMMP3Q1A5X7 153 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 WSCD2Q2TBF2 565 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 ANKDD1AQ495B1 522 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 ATPAF1Q5TC12 328 aaPredicted RBP4.66□□□□□ -1.66
SF3B1-202ENST00000409915 MBLAC2Q68D91 279 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 IRGCQ6NXR0 463 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 ARMCX5Q6P1M9 558 aa4.66□□□□□ -1.66
SF3B1-202ENST00000409915 IYDQ6PHW0 289 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms