RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PYDC1Q8WXC3 89 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 NUAK2Q9H093 628 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ACSS3Q9H6R3 686 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ZDHHC6Q9H6R6 413 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ERGIC3Q9Y282 383 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 RBL1P28749 1068 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CRATP43155 626 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 PSME3P61289 254 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MRPS22P82650 360 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 ZNF846Q147U1 533 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MIIPQ5JXC2 388 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 GPC2Q8N158 579 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 TOP6BLQ8N6T0 577 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ANKRD52Q8NB46 1076 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ACO2Q99798 780 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 PAIP1Q9H074 479 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 RERGLQ9H628 205 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CYLDQ9NQC7 956 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 DNAJC28Q9NX36 388 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.6□□□□□ -1.678e-7■■■■□ 21.3
CHD9-221ENST00000615216 NUDT5Q9UKK9 219 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 NUP188Q5SRE5 1749 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SLIT2O94813 1529 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 OR6A2O95222 327 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 PRKAR1AP10644 381 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 RCVRNP35243 200 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 BCAP31P51572 246 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 TRIM40Q6P9F5 258 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 DENND6AQ8IWF6 608 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 POU5F2Q8N7G0 328 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 TEX47Q8TBZ9 253 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ASZ1Q8WWH4 475 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SEMA4DQ92854 862 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 RERGQ96A58 199 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 EBNA1BP2Q99848 306 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 TRMOQ9BU70 441 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MAGEL2Q9UJ55 1249 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ZNF142P52746 1687 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 UBE2QL1A1L167 161 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 UGT2B11O75310 529 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SERPINB7O75635 380 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CCDC166P0CW27 439 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ITGAXP20702 1163 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 HNRNPH3P31942 346 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 HECTD3Q5T447 861 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CYP2R1Q6VVX0 501 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CXXC5Q7LFL8 322 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 IZUMO1Q8IYV9 350 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 FUKQ8N0W3 1084 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 FLCNQ8NFG4 579 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SENP8Q96LD8 212 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 TCF12Q99081 682 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SEMA6AQ9H2E6 1030 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ST3GAL5Q9UNP4 418 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 DMTF1Q9Y222 760 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 GMPPBQ9Y5P6 360 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 PEAK1Q9H792 1746 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 hCG_1818297A0A087WSY0 165 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 UBE2Q2LH0YL09 131 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 H3BNX3 289 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ANPEPP15144 967 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MYL9P24844 172 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 IL12AP29459 219 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 PRDX6P30041 224 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CAPGP40121 348 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ATP12AP54707 1039 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SOX10P56693 466 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 BRMS1LQ5PSV4 323 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 LRRC55Q6ZSA7 311 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 BBS12Q6ZW61 710 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 FBXW8Q8N3Y1 598 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CCDC185Q8N715 623 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SELENOMQ8WWX9 145 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MFSD14AQ96MC6 490 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 FHDC1Q9C0D6 1143 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 LHX5Q9H2C1 402 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CLK4Q9HAZ1 481 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 ZNF214Q9UL59 606 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 SQORQ9Y6N5 450 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 A0A087X0B3 334 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 AHCYL1O43865 530 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CBFA2T3O75081 653 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 PSMD10O75832 226 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SASH3O75995 380 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 TPSB2P20231 275 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 UBA1P22314 1058 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 BDNFP23560 247 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 GSTT1P30711 240 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 OLR1P78380 273 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ACVR2BQ13705 512 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 AUHQ13825 339 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 TPSAB1Q15661 275 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 FBXL19Q6PCT2 694 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 OR52K1Q8NGK4 314 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 RNASE11Q8TAA1 199 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 SPATA20Q8TB22 786 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CERKQ8TCT0 537 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 PHF10Q8WUB8 498 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 ELMO1Q92556 727 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms