RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 MFSD7Q6UXD7 560 aa17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 EXD1Q8NHP7 514 aa17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 UBE2Q2Q8WVN8 375 aa17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 ANP32BQ92688 251 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 SERAC1Q96JX3 654 aa17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 DESI2Q9BSY9 194 aa17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 GTPBP2Q9BX10 602 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 BRD8Q9H0E9 1235 aa17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 AASDHPPTQ9NRN7 309 aa17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 DTLQ9NZJ0 730 aa17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 HEY1Q9Y5J3 304 aa17.48■□□□□ 0.39
SHKBP1-212ENST00000596163 PRAMEF26H0Y7S4 382 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 MAGEC1O60732 1142 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 MAT2AP31153 395 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 NR2C2P49116 596 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 CSNK1EP49674 416 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 PPP2CBP62714 309 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 PPP2CAP67775 309 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 GBE1Q04446 702 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 ELP6Q0PNE2 266 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 SGCGQ13326 291 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 STAT4Q14765 748 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 TFDP3Q5H9I0 405 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 NAPEPLDQ6IQ20 393 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 ERAP2Q6P179 960 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 SPOCD1Q6ZMY3 1216 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 CCDC50Q8IVM0 306 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 LRRC8AQ8IWT6 810 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 CCDC13Q8IYE1 715 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 RNF10Q8N5U6 811 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 TEX26Q8N6G2 289 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 PLD5Q8N7P1 536 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 HDAC11Q96DB2 347 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 NUDCD1Q96RS6 583 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 ORAI3Q9BRQ5 295 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 GOLPH3Q9H4A6 298 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 SCUBE2Q9NQ36 999 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 RXFP3Q9NSD7 469 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 DLL3Q9NYJ7 618 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 AMFRQ9UKV5 643 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 PCDHA3Q9Y5H8 950 aa17.47■□□□□ 0.39
SHKBP1-212ENST00000596163 TSPAN11A1L157 253 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 MACROD2A1Z1Q3 448 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 C4orf47A7E2U8 309 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 PPP1R12AO14974 1030 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 KRT86O43790 486 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 PIGNO95427 931 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 TIMP2P16035 220 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 NFKBIAP25963 317 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 CTNNA2P26232 953 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 CD38P28907 300 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 CTNNA1P35221 906 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 CDKN2BP42772 138 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 RGRP47804 291 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 COPS2P61201 443 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 ITKQ08881 620 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 GRIK2Q13002 908 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 TAZQ16635 292 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 CAMK1DQ8IU85 385 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 FAM174AQ8TBP5 190 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 MAML1Q92585 1016 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 RMDN1Q96DB5 314 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 MGME1Q9BQP7 344 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 POLR1EQ9GZS1 481 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 EBF2Q9HAK2 575 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 RBM22Q9NW64 420 aaKnown RBP eCLIP17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 ADGRG1Q9Y653 693 aa17.46■□□□□ 0.39
SHKBP1-212ENST00000596163 A0A1B0GVT2 93 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 CDX4O14627 284 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 MUSKO15146 869 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 VILLO15195 856 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 OPHN1O60890 802 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 SOCS5O75159 536 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 MAP3K6O95382 1288 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 CER1O95813 267 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 CCNB1P14635 433 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 TGM2P21980 687 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 AKT2P31751 481 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 ABL2P42684 1182 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 RWDD2BP57060 319 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 DYNLT1P63172 113 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 PPIDQ08752 370 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 OVGP1Q12889 678 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 SLC10A2Q12908 348 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 PPP2R5EQ16537 467 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 UGP2Q16851 508 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 ZNF284Q2VY69 593 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 KAZNQ674X7 775 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 PEX26Q7Z412 305 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 IQCHQ86VS3 1027 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 MINDY1Q8N5J2 469 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 UBL4BQ8N7F7 174 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 MFSD2AQ8NA29 543 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 CXorf40AQ8TE69 158 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 ASB12Q8WXK4 309 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 VOPP1Q96AW1 172 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 SLC6A18Q96N87 628 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 SLC17A9Q9BYT1 436 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 NT5MQ9NPB1 228 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 ANKRD6Q9Y2G4 727 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms