RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 WDR45BQ5MNZ6 344 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 PEAR1Q5VY43 1037 aaPredicted RBP13.74□□□□□ -0.21
FDPS-219ENST00000495308 FBXL19Q6PCT2 694 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 ZNF662Q6ZS27 426 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 BBS12Q6ZW61 710 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 ZC3H18Q86VM9 953 aaKnown RBP13.74□□□□□ -0.21
FDPS-219ENST00000495308 SYT12Q8IV01 421 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 KIAA2013Q8IYS2 634 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 ZCCHC9Q8N567 271 aaKnown RBP13.74□□□□□ -0.21
FDPS-219ENST00000495308 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.74□□□□□ -0.21
FDPS-219ENST00000495308 MAML1Q92585 1016 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 MGME1Q9BQP7 344 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 CPEB1Q9BZB8 566 aaKnown RBP13.74□□□□□ -0.21
FDPS-219ENST00000495308 OSBPL8Q9BZF1 889 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 PCED1AQ9H1Q7 454 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 SUV39H2Q9H5I1 410 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 ATP13A3Q9H7F0 1226 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 VPS45Q9NRW7 570 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 GGT7Q9UJ14 662 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 ITM2BQ9Y287 266 aa13.74□□□□□ -0.21
FDPS-219ENST00000495308 SPINT1O43278 529 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 RNGTTO60942 597 aaKnown RBP13.73□□□□□ -0.21
FDPS-219ENST00000495308 LRP3O75074 770 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 CFIP05156 583 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 ITIH2P19823 946 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 CR2P20023 1033 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 MAT2AP31153 395 aaKnown RBP13.73□□□□□ -0.21
FDPS-219ENST00000495308 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
FDPS-219ENST00000495308 PTPN7P35236 360 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 AP1S1P61966 158 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 ZBTB17Q13105 803 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 CSRP2Q16527 193 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 MEI1Q5TIA1 1274 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 ZSWIM9Q86XI8 627 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 DNASE2BQ8WZ79 361 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 P3H4Q92791 437 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 KLK6Q92876 244 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 FATE1Q969F0 183 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 ALS2CR12Q96Q35 445 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 NUDCD1Q96RS6 583 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 TUBGCP5Q96RT8 1024 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 FAM118BQ9BPY3 351 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 KDM4CQ9H3R0 1056 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 EBF2Q9HAK2 575 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 NOD2Q9HC29 1040 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 PREBQ9HCU5 417 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 FSCN3Q9NQT6 498 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 RBM22Q9NW64 420 aaKnown RBP eCLIP13.73□□□□□ -0.21
FDPS-219ENST00000495308 SEPT10Q9P0V9 454 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.73□□□□□ -0.21
FDPS-219ENST00000495308 DCHS1Q96JQ0 3298 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 CACNA1EQ15878 2313 aa13.73□□□□□ -0.21
FDPS-219ENST00000495308 A0A1W2PQU0 124 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 C10orf142B7Z368 130 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 APOC4-APOC2K7ER74 178 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 NEBLO76041 1014 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 PCDH8O95206 1070 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 JCHAINP01591 159 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 APOC2P02655 101 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 PRKCGP05129 697 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 ZNF806P0C7X5 589 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 TIMP2P16035 220 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 SERPINA4P29622 427 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 HSPA9P38646 679 aaKnown RBP13.72□□□□□ -0.21
FDPS-219ENST00000495308 NR2C2P49116 596 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 IFI35P80217 286 aaPredicted RBP13.72□□□□□ -0.21
FDPS-219ENST00000495308 DSC2Q02487 901 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 BCL2L1Q07817 233 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 CCDC15Q0P6D6 951 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 GRM3Q14832 879 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 PRKD1Q15139 912 aaPredicted RBP13.72□□□□□ -0.21
FDPS-219ENST00000495308 CFAP58Q5T655 872 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 CCDC181Q5TID7 509 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 PRR23CQ6ZRP0 262 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 TTC7BQ86TV6 843 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 PAF1Q8N7H5 531 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 ZNF641Q96N77 438 aaPredicted RBP13.72□□□□□ -0.21
FDPS-219ENST00000495308 IL12RB2Q99665 862 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 SEMA3CQ99985 751 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 ORAI3Q9BRQ5 295 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 POLR1EQ9GZS1 481 aaKnown RBP13.72□□□□□ -0.21
FDPS-219ENST00000495308 RXFP3Q9NSD7 469 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 DKK3Q9UBP4 350 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 ZFR2Q9UPR6 939 aaKnown RBP13.72□□□□□ -0.21
FDPS-219ENST00000495308 PCDHGC4Q9Y5F7 938 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 FADS3Q9Y5Q0 445 aa13.72□□□□□ -0.21
FDPS-219ENST00000495308 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.71□□□□□ -0.21
FDPS-219ENST00000495308 TSPAN11A1L157 253 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 CD27P26842 260 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 CETN2P41208 172 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 CCR5P51681 352 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 OTUD4Q01804 1114 aaKnown RBP13.71□□□□□ -0.21
FDPS-219ENST00000495308 SEMG2Q02383 582 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 TRAF2Q12933 501 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 IHHQ14623 411 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 NOMO1Q15155 1222 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 TRIM61Q5EBN2 209 aa13.71□□□□□ -0.21
FDPS-219ENST00000495308 SEL1L3Q68CR1 1132 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms