RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 PYGMP11217 842 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 PECAM1P16284 738 aaPredicted RBP17.85■□□□□ 0.45
EPCAM-203ENST00000419334 PTPRZ1P23471 2315 aaPredicted RBP17.85■□□□□ 0.45
EPCAM-203ENST00000419334 SERPINA4P29622 427 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 IFI35P80217 286 aaPredicted RBP17.85■□□□□ 0.45
EPCAM-203ENST00000419334 CCDC6Q16204 474 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 TBC1D3GQ6DHY5 549 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 ALG1LQ6GMV1 187 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 TBC1D3CQ6IPX1 549 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 NEK5Q6P3R8 708 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 TRIM69Q86WT6 500 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 TBC1D3Q8IZP1 549 aaPredicted RBP17.85■□□□□ 0.45
EPCAM-203ENST00000419334 CEP76Q8TAP6 659 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 LRRN4Q8WUT4 740 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 P3H4Q92791 437 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 HEMGNQ9BXL5 484 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 DOCK9Q9BZ29 2069 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 POLR1EQ9GZS1 481 aaKnown RBP17.85■□□□□ 0.45
EPCAM-203ENST00000419334 NT5MQ9NPB1 228 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 HAUS2Q9NVX0 235 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 SAE1Q9UBE0 346 aaPredicted RBP17.85■□□□□ 0.45
EPCAM-203ENST00000419334 SUSD2Q9UGT4 822 aa17.85■□□□□ 0.45
EPCAM-203ENST00000419334 EIF2B4Q9UI10 523 aaKnown RBP17.85■□□□□ 0.45
EPCAM-203ENST00000419334 TRPM6Q9BX84 2022 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.84■□□□□ 0.45
EPCAM-203ENST00000419334 LATO43561 262 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 GJB3O75712 270 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 CD27P26842 260 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 MAOBP27338 520 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 MAXP61244 160 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 PPP2CBP62714 309 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 PPP2CAP67775 309 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 AP1B1Q10567 949 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 CAMK1DQ8IU85 385 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 TRIM58Q8NG06 486 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 C1orf216Q8TAB5 229 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 SNX19Q92543 992 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 IL12RB2Q99665 862 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 ORAI3Q9BRQ5 295 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 HERPUD2Q9BSE4 406 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 SCUBE2Q9NQ36 999 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 RBM22Q9NW64 420 aaKnown RBP eCLIP17.84■□□□□ 0.45
EPCAM-203ENST00000419334 FADS3Q9Y5Q0 445 aa17.84■□□□□ 0.45
EPCAM-203ENST00000419334 CACNA1EQ15878 2313 aa17.83■□□□□ 0.45
EPCAM-203ENST00000419334 FRYLO94915 3013 aa17.83■□□□□ 0.45
EPCAM-203ENST00000419334 ZNF292O60281 2723 aa17.83■□□□□ 0.45
EPCAM-203ENST00000419334 A0A1W2PPC4 97 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 KCNK1O00180 336 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 TRAFD1O14545 582 aaPredicted RBP17.83■□□□□ 0.44
EPCAM-203ENST00000419334 HLA-DQB2P05538 268 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 GNSP15586 552 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 ABL2P42684 1182 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 SUOXP51687 545 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 BCL2L1Q07817 233 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 PRKD1Q15139 912 aaPredicted RBP17.83■□□□□ 0.44
EPCAM-203ENST00000419334 DUOXA1Q1HG43 343 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 MEI1Q5TIA1 1274 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 AADACL2Q6P093 401 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 SLC23A3Q6PIS1 610 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 BRAT1Q6PJG6 821 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 PRR23CQ6ZRP0 262 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 TFB1MQ8WVM0 346 aaKnown RBP17.83■□□□□ 0.44
EPCAM-203ENST00000419334 SPOCK2Q92563 424 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 ECHDC3Q96DC8 303 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 NSMCE3Q96MG7 304 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 SMOC1Q9H4F8 434 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 NOD2Q9HC29 1040 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 ATP8A1Q9Y2Q0 1164 aa17.83■□□□□ 0.44
EPCAM-203ENST00000419334 A0A1B0GTW7 788 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 TTC24A2A3L6 582 aaPredicted RBP17.82■□□□□ 0.44
EPCAM-203ENST00000419334 PATE3B3GLJ2 98 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 AREL1O15033 823 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 KHNYNO15037 678 aaKnown RBP17.82■□□□□ 0.44
EPCAM-203ENST00000419334 TSPAN6O43657 245 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 RNGTTO60942 597 aaKnown RBP17.82■□□□□ 0.44
EPCAM-203ENST00000419334 SOCS5O75159 536 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 NEBLO76041 1014 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 TJP3O95049 919 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 TIMP2P16035 220 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 CES1P23141 567 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 NUDT1P36639 197 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 CCDC173Q0VFZ6 552 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 ZBTB17Q13105 803 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 ZNF211Q13398 564 aaPredicted RBP17.82■□□□□ 0.44
EPCAM-203ENST00000419334 XRCC4Q13426 336 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 NOMO1Q15155 1222 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 TRIM61Q5EBN2 209 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 CFAP58Q5T655 872 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 TTC7BQ86TV6 843 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 ZSCAN30Q86W11 494 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 ZCCHC9Q8N567 271 aaKnown RBP17.82■□□□□ 0.44
EPCAM-203ENST00000419334 HAUS1Q96CS2 278 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 SEMA3CQ99985 751 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 MIR1-1HGQ9H1L0 117 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 EBF2Q9HAK2 575 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 PCDH15Q96QU1 1955 aa17.82■□□□□ 0.44
EPCAM-203ENST00000419334 A0A1W2PQ67 120 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 A0A1W2PQU0 124 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 UPK3BL1B0FP48 263 aa17.81■□□□□ 0.44
EPCAM-203ENST00000419334 HACD1B0YJ81 288 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms