RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PEPDP12955 493 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 PGAM1P18669 254 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 CDH5P33151 784 aaPredicted RBP14.85□□□□□ -0.03
CCDC50-201ENST00000392455 GSSP48637 474 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 ALG10Q5BKT4 473 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 FIP1L1Q6UN15 594 aaKnown RBP14.85□□□□□ -0.03
CCDC50-201ENST00000392455 HASPINQ8TF76 798 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 ATG4CQ96DT6 458 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 PPP3R2Q96LZ3 170 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 YME1L1Q96TA2 773 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 CBWD1Q9BRT8 395 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 PRRG4Q9BZD6 226 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 SEMA3GQ9NS98 782 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 ZNF639Q9UID6 485 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 AP4E1Q9UPM8 1137 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 PCDHGB2Q9Y5G2 931 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 IFNA7P01567 189 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 KCNMA1Q12791 1236 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 ZNF398Q8TD17 642 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 MKL1Q969V6 931 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 ADGRB3O60242 1522 aa14.85□□□□□ -0.03
CCDC50-201ENST00000392455 ORC5O43913 435 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 CCNE2O96020 404 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 GYPCP04921 128 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 KLHL26Q53HC5 615 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 TCEAL3Q969E4 200 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 GTF2A2P52657 109 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ARPC4P59998 168 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 DDX18Q9NVP1 670 aaKnown RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ZNF180Q9UJW8 692 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 KAT7O95251 611 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 SERPINA4P29622 427 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 CCR1P32246 355 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 LHFPL3Q86UP9 236 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 APOPT1Q96IL0 206 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ZSWIM1Q9BR11 485 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 TUBB1Q9H4B7 451 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 CLK4Q9HAZ1 481 aaKnown RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ZDHHC9Q9Y397 364 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 AK5Q9Y6K8 562 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 PSIP1O75475 530 aaKnown RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 WEE1P30291 646 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 PTGS2P35354 604 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 IDH2P48735 452 aaKnown RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 CCSAPQ6IQ19 270 aaPredicted RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ANKRD13AQ8IZ07 590 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 KAT5Q92993 513 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 LENG9Q96B70 501 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 DCUN1D5Q9BTE7 237 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 TFR2Q9UP52 801 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 PCDHA3Q9Y5H8 950 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 NOL4O94818 638 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 SGPL1O95470 568 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 SLC26A2P50443 739 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 BEND5Q7L4P6 421 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 C17orf50Q8WW18 174 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ZKSCAN4Q969J2 545 aaPredicted RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 MAP3K14Q99558 947 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 MED14O60244 1454 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 SLC6A2P23975 617 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 OTUB2Q96DC9 234 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 DGCR6LQ9BY27 220 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 IL22Q9GZX6 179 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 LEF1Q9UJU2 399 aaPredicted RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 CARD8Q9Y2G2 431 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 CCNT2O60583 730 aaKnown RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 CATP04040 527 aaKnown RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ANXA5P08758 320 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 VDRP11473 427 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ACO1P21399 889 aaKnown RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 THOP1P52888 689 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 TAS2R41P59536 307 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 MARC1Q5VT66 337 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 SYT12Q8IV01 421 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ETNPPLQ8TBG4 499 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 TMCO6Q96DC7 493 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 PAFAH2Q99487 392 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 ABCB10Q9NRK6 738 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 AGPAT3Q9NRZ7 376 aa14.84□□□□□ -0.03
CCDC50-201ENST00000392455 MRPS7Q9Y2R9 242 aaKnown RBP14.84□□□□□ -0.03
CCDC50-201ENST00000392455 XYLBO75191 536 aa14.83□□□□□ -0.03
CCDC50-201ENST00000392455 SASH3O75995 380 aa14.83□□□□□ -0.03
CCDC50-201ENST00000392455 TYMPP19971 482 aa14.83□□□□□ -0.03
CCDC50-201ENST00000392455 GLRBP48167 497 aa14.83□□□□□ -0.03
CCDC50-201ENST00000392455 LCN1P1Q5VSP4 162 aa14.83□□□□□ -0.03
CCDC50-201ENST00000392455 SNX20Q7Z614 316 aa14.83□□□□□ -0.03
CCDC50-201ENST00000392455 CHERPQ8IWX8 916 aaKnown RBP14.83□□□□□ -0.03
CCDC50-201ENST00000392455 VCPIP1Q96JH7 1222 aa14.83□□□□□ -0.03
CCDC50-201ENST00000392455 CHMP1AQ9HD42 196 aaPredicted RBP14.83□□□□□ -0.03
CCDC50-201ENST00000392455 OGTO15294 1046 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 STYK1Q6J9G0 422 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 FAM81AQ8TBF8 368 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 PRMT6Q96LA8 375 aaPredicted RBP14.83□□□□□ -0.04
CCDC50-201ENST00000392455 C15orf41Q9Y2V0 281 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 SUPT20HL2P0C7V6 817 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 CCNCP24863 283 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 CDK9P50750 372 aaKnown RBP14.83□□□□□ -0.04
CCDC50-201ENST00000392455 RPP38P78345 283 aaKnown RBP14.83□□□□□ -0.04
CCDC50-201ENST00000392455 PSMD5Q16401 504 aa14.83□□□□□ -0.04
CCDC50-201ENST00000392455 RNF43Q68DV7 783 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 200.6 ms