RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 IRF8Q02556 426 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 SPIDRQ14159 915 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 TARBP2Q15633 366 aaKnown RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 FAM153CQ494X1 144 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 TMEM154Q6P9G4 183 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 KCTD13Q8WZ19 329 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 ABTB1Q969K4 478 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 CSPG4P5Q96PW8 444 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 CPXM1Q96SM3 734 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 C9orf16Q9BUW7 83 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 GBA3Q9H227 469 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 RHOJQ9H4E5 214 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 SLC28A3Q9HAS3 691 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 ZFYVE1Q9HBF4 777 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 GLOD4Q9HC38 313 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 GTF2IRD1Q9UHL9 959 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 RAB23Q9ULC3 237 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 PNMA8BQ9ULN7 279 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 SNX8Q9Y5X2 465 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 SETD1AO15047 1707 aaKnown RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 PKD1L3Q7Z443 1732 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 MYH9P35579 1960 aaKnown RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 UBXN8O00124 270 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 KIF1CO43896 1103 aaKnown RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 HS6ST1O60243 411 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 ZNF682O95780 498 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 CST3P01034 146 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 PRNPP04156 253 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 ITGA2BP08514 1039 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 CLCNKBP51801 687 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 CRYMQ14894 314 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 TRIP4Q15650 581 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 PFKFB4Q16877 469 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 FBXW10Q5XX13 1052 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 RNF43Q68DV7 783 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 DRICH1Q6PGQ1 229 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 SYT12Q8IV01 421 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 NLGN2Q8NFZ4 835 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 HDAC7Q8WUI4 952 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 ASZ1Q8WWH4 475 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 QKIQ96PU8 341 aaKnown RBP eCLIP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 TMEM245Q9H330 911 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 EIF2B3Q9NR50 452 aaKnown RBP4.9□□□□□ -1.63
SCN3A-202ENST00000360093 RPS6KA6Q9UK32 745 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 INVSQ9Y283 1065 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 SNX13Q9Y5W8 968 aa4.9□□□□□ -1.63
SCN3A-202ENST00000360093 EPHB6O15197 1021 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 AVILO75366 819 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ULK1O75385 1050 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 KRT75O95678 551 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GJB1P08034 283 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PTPN2P17706 415 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 IGFBP4P22692 258 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 BRCC3P46736 316 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 EVX2Q03828 476 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ALG11Q2TAA5 492 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 TMEM26Q6ZUK4 368 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 IRF2BP1Q8IU81 584 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ADHFE1Q8IWW8 467 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SVOPQ8N4V2 548 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PROX1Q92786 737 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ABHD14A-ACY1A0A1B0GW23 586 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 E9PAM4 449 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 FCHO1O14526 889 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 MAP2K7O14733 419 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 INHAP05111 366 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 EIF2S1P05198 315 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ATP6V1C1P21283 382 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PPIBP23284 216 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 CORO1AP31146 461 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 RPA3P35244 121 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 AP1S1P61966 158 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 RGS1Q08116 209 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ZNHIT3Q15649 155 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 YTHDF3Q7Z739 585 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ATG16L2Q8NAA4 619 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GLMNQ92990 594 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 RERGQ96A58 199 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 CXorf40BQ96DE9 158 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 RIPOR3Q96MK2 946 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 CATSPER2Q96P56 530 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 DEC1Q9P2X7 70 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 NUDT5Q9UKK9 219 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 UBOX5O94941 541 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 C1RP00736 705 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 IDO1P14902 403 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 VAC14Q08AM6 782 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 IRF5Q13568 498 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 TBCELQ5QJ74 424 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 VARS2Q5ST30 1063 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GPR158Q5T848 1215 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 CES3Q6UWW8 571 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ZBTB49Q6ZSB9 765 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GRIN3AQ8TCU5 1115 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 MYO19Q96H55 970 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PCED1BQ96HM7 432 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SYBUQ9NX95 663 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PER2O15055 1255 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 USP12O75317 370 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 LRCH4O75427 683 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms