RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 CHRNA1P02708 482 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 HNRNPLP14866 589 aaKnown RBP eCLIP17.99■□□□□ 0.478e-8■□□□□ 10.5
TSPAN17-201ENST00000298564 ZNF26P17031 533 aaPredicted RBP17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 AIF1P55008 147 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 GJA9P57773 515 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 PTK2BQ14289 1009 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 AGMOQ6ZNB7 445 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 BHLHA9Q7RTU4 235 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 KCTD4Q8WVF5 259 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 OR12D3Q9UGF7 316 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 RSL24D1Q9UHA3 163 aaKnown RBP17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 VANGL2Q9ULK5 521 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 ZNF510Q9Y2H8 683 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 TRPV2Q9Y5S1 764 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 TLL2Q9Y6L7 1015 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 UGT1A6P19224 532 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 CD68P34810 354 aaPredicted RBP17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 RPL14P50914 215 aaKnown RBP17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 ZBTB17Q13105 803 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 LPIN1Q14693 890 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 ARL13BQ3SXY8 428 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 CST9Q5W186 159 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 KRT80Q6KB66 452 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 GDF6Q6KF10 455 aaPredicted RBP17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 ACE2Q9BYF1 805 aaPredicted RBP17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 CDH9Q9ULB4 789 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 COPG1Q9Y678 874 aaKnown RBP17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 NEMP2A6NFY4 417 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 E7ENX8 843 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 TPST1O60507 370 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 AP2A1O95782 977 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 GNAO1P09471 354 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 CCR3P51677 355 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 HUNKP57058 714 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 ZNF280DQ6N043 979 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 ADCY4Q8NFM4 1077 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 SMARCD1Q96GM5 515 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 RBBP8Q99708 897 aa17.99■□□□□ 0.47
TSPAN17-201ENST00000298564 FAM149AA5PLN7 773 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 HDAC3O15379 428 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 STAMBPO95630 424 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 PPARGP37231 505 aaPredicted RBP17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 SPANXN3Q5MJ09 141 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 STXBP5Q5T5C0 1151 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 MYLPFQ96A32 169 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 CELF6Q96J87 481 aaKnown RBP17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 LRRC40Q9H9A6 602 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 AGO3Q9H9G7 860 aaKnown RBP17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 BFARQ9NZS9 450 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 RUVBL2Q9Y230 463 aaKnown RBP17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 PRSS51A0A1B0GVH4 220 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 ACOT8O14734 319 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 TIPRLO75663 272 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 LRIG2O94898 1065 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 BDNFP23560 247 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 GARSP41250 739 aaKnown RBP17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 HCAR3P49019 387 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 PLOD1Q02809 727 aaPredicted RBP17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 GRM3Q14832 879 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 CCDC153Q494R4 210 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 HASPINQ8TF76 798 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 PGAP3Q96FM1 320 aaPredicted RBP17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 RPL10LQ96L21 214 aaKnown RBP17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 RTP3Q9BQQ7 232 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 MLPHQ9BV36 600 aaPredicted RBP17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 CCDC167Q9P0B6 97 aa17.98■□□□□ 0.47
TSPAN17-201ENST00000298564 PGK1P00558 417 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 POMCP01189 267 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 NME5P56597 212 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 PDAP1Q13442 181 aaKnown RBP17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 NAB1Q13506 487 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 PPP1R3AQ16821 1122 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 UPP1Q16831 310 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 KDELC2Q7Z4H8 507 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 CLVS1Q8IUQ0 354 aaPredicted RBP17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 TRPV1Q8NER1 839 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 RP9Q8TA86 221 aaKnown RBP17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 RNF34Q969K3 372 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 CPNE1Q99829 537 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 TRIM8Q9BZR9 551 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 IL1RL2Q9HB29 575 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 RRN3Q9NYV6 651 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 AP4S1Q9Y587 144 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 PTCH2Q9Y6C5 1203 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 NUP205Q92621 2012 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 TCAF2A6NFQ2 919 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 SAC3D1A6NKF1 404 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 C9JVG2 144 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 NCAM2O15394 837 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 B3GAT3O94766 335 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 SBK3P0C264 359 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 IMPDH2P12268 514 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 AKR1A1P14550 325 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 TSPAN8P19075 237 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 NFKB1P19838 968 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 SPRP35270 261 aaPredicted RBP17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 CTBSQ01459 385 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 FAM47BQ8NA70 645 aa17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.97■□□□□ 0.47
TSPAN17-201ENST00000298564 CYP4F12Q9HCS2 524 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms