RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 VPS35Q96QK1 796 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 ZNF385DQ9H6B1 395 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 ZBTB26Q9HCK0 441 aa10.3□□□□□ -0.76
SPIDR-224ENST00000524126 HEATR9A2RTY3 570 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 TMEM150BA6NC51 233 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 SPDYE2BA6NHP3 402 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 ZBBXA8MT70 800 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 A8MV72 311 aaPredicted RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 DDX39AO00148 427 aaKnown RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 MEN1O00255 615 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 PMM2O15305 246 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 CHADO15335 359 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 ITGBL1O95965 494 aaPredicted RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 SPDYE6P0CI01 402 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 ATP5OP48047 213 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 POLD2P49005 469 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 SERPINB9P50453 376 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 GCNT1Q02742 428 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 DGKZQ13574 1117 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 RFTN1Q14699 578 aaPredicted RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 HERC3Q15034 1050 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 NPTX1Q15818 432 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 PPP1R3AQ16821 1122 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 TBCELQ5QJ74 424 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 TWF2Q6IBS0 349 aaKnown RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 PADI6Q6TGC4 694 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 HAUS6Q7Z4H7 955 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 ZNF677Q86XU0 584 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 SIAH1Q8IUQ4 282 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 NIM1KQ8IY84 436 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 NDNFQ8TB73 568 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 CNDP2Q96KP4 475 aaKnown RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 CITED4Q96RK1 184 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 LXNQ9BS40 222 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 SEZ6LQ9BYH1 1024 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 MTMR12Q9C0I1 747 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 CLPBQ9H078 707 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 C2orf40Q9H1Z8 148 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 ADAMTS10Q9H324 1103 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 DDX28Q9NUL7 540 aaKnown RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 PKD2L2Q9NZM6 624 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 TESMINQ9Y4I5 508 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 GJA3Q9Y6H8 435 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 MAU2Q9Y6X3 613 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 PTPRFP10586 1907 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 TRIM24O15164 1050 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 KCNN4O15554 427 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 USP12O75317 370 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 YBX3P16989 372 aaKnown RBP eCLIP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 HOXD10P28358 340 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 SHMT2P34897 504 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 SREBF1P36956 1147 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 CAPGP40121 348 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 ACOT2P49753 483 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 SLC25A11Q02978 314 aaKnown RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 C1QBPQ07021 282 aaKnown RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 ZIK1Q3SY52 487 aaPredicted RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 CYBRD1Q53TN4 286 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 GLRA4Q5JXX5 417 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 FAM219BQ5XKK7 198 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 DESI1Q6ICB0 168 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 PMF1Q6P1K2 205 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 GLRX5Q86SX6 157 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 GATAD2AQ86YP4 633 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 KIAA0319LQ8IZA0 1049 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 CADM2Q8N3J6 435 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 DHRSXQ8N5I4 330 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 TMEM35BQ8NCS4 154 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 RPL10LQ96L21 214 aaKnown RBP10.29□□□□□ -0.76
SPIDR-224ENST00000524126 DMRTB1Q96MA1 342 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 RMDN3Q96TC7 470 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 DHRS9Q9BPW9 319 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 MXRA8Q9BRK3 442 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 EFHD1Q9BUP0 239 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 PMF1-BGLAPU3KQ54 211 aa10.29□□□□□ -0.76
SPIDR-224ENST00000524126 IGKV6D-41A0A0C4DH26 115 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 H0Y858 1186 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 GRID2O43424 1007 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 DEAF1O75398 565 aaPredicted RBP10.28□□□□□ -0.76
SPIDR-224ENST00000524126 TADA2AO75478 443 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 GPC4O75487 556 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 KRT8P05787 483 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 ASNSP08243 561 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 ITIH1P19827 911 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 PSMA2P25787 234 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 ABCG1P45844 678 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 CCNA1P78396 465 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 MRPS15P82914 257 aaKnown RBP10.28□□□□□ -0.76
SPIDR-224ENST00000524126 IRF9Q00978 393 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 AP3B2Q13367 1082 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 GEN1Q17RS7 908 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 BRDTQ58F21 947 aaPredicted RBP10.28□□□□□ -0.76
SPIDR-224ENST00000524126 STXBP5Q5T5C0 1151 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 SEL1L3Q68CR1 1132 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 FKBP9P1Q75LS8 142 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 C12orf56Q8IXR9 622 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 CMTR2Q8IYT2 770 aaKnown RBP10.28□□□□□ -0.76
SPIDR-224ENST00000524126 POC5Q8NA72 575 aa10.28□□□□□ -0.76
SPIDR-224ENST00000524126 TP53I13Q8NBR0 393 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms