RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 TWNKQ96RR1 684 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 SF3B5Q9BWJ5 86 aaKnown RBP3.36□□□□□ -1.87
RBM28-207ENST00000488249 NPLQ9BXD5 320 aaPredicted RBP3.36□□□□□ -1.87
RBM28-207ENST00000488249 KLHL31Q9H511 634 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 BLOC1S4Q9NUP1 217 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 MRGBPQ9NV56 204 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 NCKIPSDQ9NZQ3 722 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 NLKQ9UBE8 527 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 SEL1LQ9UBV2 794 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 SUFUQ9UMX1 484 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 INSL5Q9Y5Q6 135 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 MAGED1Q9Y5V3 778 aaPredicted RBP3.36□□□□□ -1.87
RBM28-207ENST00000488249 EVPLQ92817 2033 aa3.36□□□□□ -1.87
RBM28-207ENST00000488249 PROB1E7EW31 1015 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 I6L893 689 aaPredicted RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 KLK10O43240 276 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 TSPAN3O60637 253 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 IL1AP01583 271 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 LCATP04180 440 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 TPM2P07951 284 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 IFIT1P09914 478 aaKnown RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 WEE2P0C1S8 567 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 ENO3P13929 434 aaPredicted RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 HSD3B1P14060 373 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 CAPN3P20807 821 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 YWHAQP27348 245 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 RFC1P35251 1148 aaPredicted RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 CDKN2AP42771 156 aaKnown RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 RAD52P43351 418 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 PTPN9P43378 593 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 MAPK9P45984 424 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 KCNJ4P48050 445 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 RFX5P48382 616 aaPredicted RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 PPP3CCP48454 512 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 ENTPD1P49961 510 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 ZNF132P52740 706 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 NANOS2P60321 138 aaKnown RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 ROR2Q01974 943 aaKnown RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 RPE65Q16518 533 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 MAP3K21Q5TCX8 1036 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 OTUD1Q5VV17 481 aaPredicted RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 NAPEPLDQ6IQ20 393 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 ZNF449Q6P9G9 518 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 GALNT5Q7Z7M9 940 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 TBC1D1Q86TI0 1168 aaPredicted RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 TMC8Q8IU68 726 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 CADM3Q8N126 398 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 ARL10Q8N8L6 244 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 B4GALNT2Q8NHY0 566 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 OIT3Q8WWZ8 545 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 ANP32BQ92688 251 aaKnown RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 SH3KBP1Q96B97 665 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 MARK4Q96L34 752 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 REEP2Q9BRK0 252 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 STN1Q9H668 368 aaKnown RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 CATSPERBQ9H7T0 1116 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 PRKRIP1Q9H875 184 aaPredicted RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 TTC12Q9H892 705 aaPredicted RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 ZCCHC17Q9NP64 241 aaKnown RBP3.35□□□□□ -1.87
RBM28-207ENST00000488249 ATP8A2Q9NTI2 1148 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 HIF1ANQ9NWT6 349 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 PLK2Q9NYY3 685 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 PCDHA7Q9UN72 937 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 TTLL3Q9Y4R7 772 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 CLDN16Q9Y5I7 305 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 SNX5Q9Y5X3 404 aa3.35□□□□□ -1.87
RBM28-207ENST00000488249 A0A1B0GVC2 190 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 OR6C75A6NL08 312 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 FAM157AC9JC47 383 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 INAFM1C9JVW0 142 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 MS4A18H0YCH9 400 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 PEX12O00623 359 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 SMAD6O43541 496 aaKnown RBP3.34□□□□□ -1.87
RBM28-207ENST00000488249 RGS14O43566 566 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 SPRY3O43610 288 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 GFPT2O94808 682 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 MBD4O95243 580 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 CLDN7O95471 211 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 SERPINC1P01008 464 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 PYGLP06737 847 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 MMP3P08254 477 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 CKMT1AP12532 417 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 ITGB6P18564 788 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 CD72P21854 359 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 CCKARP32238 428 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 TNNT2P45379 298 aaPredicted RBP3.34□□□□□ -1.87
RBM28-207ENST00000488249 CDH12P55289 794 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 BPIFB3P59826 476 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 IRX3P78415 501 aaPredicted RBP3.34□□□□□ -1.87
RBM28-207ENST00000488249 TBL3Q12788 808 aaKnown RBP3.34□□□□□ -1.87
RBM28-207ENST00000488249 GPS2Q13227 327 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 PRKG2Q13237 762 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 G3BP1Q13283 466 aaKnown RBP eCLIP3.34□□□□□ -1.87
RBM28-207ENST00000488249 E2F5Q15329 346 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 SLC18A3Q16572 532 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 FBXO43Q4G163 708 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 CCDC158Q5M9N0 1113 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 DNTTIP2Q5QJE6 756 aaKnown RBP3.34□□□□□ -1.87
RBM28-207ENST00000488249 CCDC129Q6ZRS4 1044 aa3.34□□□□□ -1.87
RBM28-207ENST00000488249 Q6ZSV7 163 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms