RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 KLQ9UEF7 1012 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 MAPRE3Q9UPY8 281 aa17.25■□□□□ 0.35
TRAPPC11-201ENST00000334690 SMIM31A0A1B0GVY4 71 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 BUD23O43709 281 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 CYP2A6P11509 494 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 XIAPP98170 497 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 GRIK3Q13003 919 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 PWP1Q13610 501 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 NEDD8Q15843 81 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 CCDC142Q17RM4 750 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 USP45Q70EL2 814 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 FITM2Q8N6M3 262 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 NKX2-3Q8TAU0 364 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 UTP15Q8TED0 518 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 RCN3Q96D15 328 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 SERAC1Q96JX3 654 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 PPP3R2Q96LZ3 170 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 NDNQ99608 321 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 DLGAP3O95886 979 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 UNGP13051 313 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 TYMPP19971 482 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 PSMD7P51665 324 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 ALDH6A1Q02252 535 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 BNIP2Q12982 314 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 TRMT11Q7Z4G4 463 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 FAM228AQ86W67 206 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 MED8Q96G25 268 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 AFDNP55196 1824 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 HGFP14210 728 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 NOMO2Q5JPE7 1267 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 PPP1R15BQ5SWA1 713 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 TREML2Q5T2D2 321 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 MAGEC3Q8TD91 643 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 LRRN4Q8WUT4 740 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 SELENOMQ8WWX9 145 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 ASB8Q9H765 288 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 ARL8BQ9NVJ2 186 aa17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 HBS1LQ9Y450 684 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-201ENST00000334690 CES1P23141 567 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 IRF8Q02556 426 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 PRAMEF19Q5SWL8 479 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 ZCCHC7Q8N3Z6 543 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 DCUN1D5Q9BTE7 237 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 TMEM216Q9P0N5 145 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 STXBP5LQ9Y2K9 1186 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 LYPLA1O75608 230 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 WEE1P30291 646 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 RPL5P46777 297 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 SLC16A1P53985 500 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 TUSC3Q13454 348 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 INTS6LQ5JSJ4 861 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 PHACTR4Q8IZ21 702 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 DAW1Q8N136 415 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 KRT78Q8N1N4 520 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 HDAC10Q969S8 669 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 MIEF2Q96C03 454 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 NDEL1Q9GZM8 345 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 PAIP1Q9H074 479 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 DDX18Q9NVP1 670 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 RPTORQ8N122 1335 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 PRR23AA6NEV1 266 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 C5orf60A6NFR6 353 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 AZIN1O14977 448 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 KCNH1O95259 989 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 GSTM1P09488 218 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 LPOP22079 712 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 HIRAP54198 1017 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 FASTKD3Q14CZ7 662 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 PDK3Q15120 406 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 TXNDC11Q6PKC3 985 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 ZNF621Q6ZSS3 439 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 ANKS1BQ7Z6G8 1248 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 SYT12Q8IV01 421 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 ZNF276Q8N554 614 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 SDCBP2Q9H190 292 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 HPS4Q9NQG7 708 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 PNPOQ9NVS9 261 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 TRPC4Q9UBN4 977 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 IPPQ9Y573 584 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 PCDHA2Q9Y5H9 948 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 AKAP12Q02952 1782 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 GPR25O00155 361 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 CSH1P0DML2 217 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 CSH2P0DML3 217 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 PTPN3P26045 913 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 ADSSP30520 456 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 NR1H2P55055 460 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 USP4Q13107 963 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 MARK2Q7KZI7 788 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 POP5Q969H6 163 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 QKIQ96PU8 341 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 FTHL17Q9BXU8 183 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 HMX1Q9NP08 348 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 FETUBQ9UGM5 382 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 ITM2BQ9Y287 266 aa17.23■□□□□ 0.35
TRAPPC11-201ENST00000334690 MSCO60682 206 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 FAM20BO75063 409 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 ULK1O75385 1050 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 MAPKAPK3Q16644 382 aa17.22■□□□□ 0.35
TRAPPC11-201ENST00000334690 OSBPL7Q9BZF2 842 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms