RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SLC8A2Q9UPR5 921 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ERVW-1Q9UQF0 538 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 DOCK4Q8N1I0 1966 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 TYW5A2RUC4 315 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 PRR23AA6NEV1 266 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 GOLGA6L3A6NEY3 463 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 MYO1FO00160 1098 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 PRPSAP2O60256 369 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 BUB1BO60566 1050 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 ATG13O75143 517 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 ZNF821O75541 412 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 RNF8O76064 485 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 POLR2EP19388 210 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 AMPD1P23109 780 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 EPHB2P29323 1055 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 OR1E1P30953 314 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 GJC1P36383 396 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 METAP1P53582 386 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 AIF1P55008 147 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 CCZ1BP86790 482 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 CCZ1P86791 482 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 ECT2LQ008S8 904 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 GNA12Q03113 381 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 MTA1Q13330 715 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 DPYSQ14117 519 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 ACAP1Q15027 740 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 DPYSL2Q16555 572 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 PREPLQ4J6C6 727 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 FNDC3BQ53EP0 1204 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 PPP6R3Q5H9R7 873 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 EOGTQ5NDL2 527 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 FAM182AQ5T1J6 154 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 SERPINA13PQ6UXR4 307 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 ARHGAP36Q6ZRI8 547 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 ARHGAP12Q8IWW6 846 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 RTL3Q8N8U3 475 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 TMEM102Q8N9M5 508 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 TSTD1Q8NFU3 115 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 FAM71BQ8TC56 605 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 FRS2Q8WU20 508 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 HMGB4Q8WW32 186 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 RLN3Q8WXF3 142 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 ARHGEF2Q92974 986 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 HMCESQ96FZ2 354 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 MRGPRX1Q96LB2 322 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 ACE2Q9BYF1 805 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 MUC3BQ9H195 1237 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 PCDH18Q9HCL0 1135 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 PRSS16Q9NQE7 514 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 ENAMQ9NRM1 1142 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 VPS28Q9UK41 221 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 INTUQ9ULD6 942 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 DCHS1Q96JQ0 3298 aa9.68□□□□□ -0.86
NPLOC4-219ENST00000576713 BPTFQ12830 3046 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 ILVBLA1L0T0 632 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 C3orf70A6NLC5 250 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 WASH4PA8MWX3 477 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 M0R082 166 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 PDE2AO00408 941 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 EEF2KO00418 725 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 BUB1O43683 1085 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 SMNDC1O75940 238 aaKnown RBP eCLIP9.67□□□□□ -0.863e-8■□□□□ 9.1
NPLOC4-219ENST00000576713 APBB3O95704 486 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 EPHX1P07099 455 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 SRCP12931 536 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 HOXB4P17483 251 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 ERCC2P18074 760 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 BCKDHBP21953 392 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 HOXA6P31267 233 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 CYLC1P35663 651 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 MARCKSL1P49006 195 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 DGKEP52429 567 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 HADHBP55084 474 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 TPI1P60174 286 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 CAMK2GQ13555 558 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 SLC12A1Q13621 1099 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 HSF5Q4G112 596 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 C9orf64Q5T6V5 341 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 AFMIDQ63HM1 303 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 C8orf86Q6ZUL3 223 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 RFX8Q6ZV50 586 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 POLNQ7Z5Q5 900 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 SETD3Q86TU7 594 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 WDR5BQ86VZ2 330 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 LONP2Q86WA8 852 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 ZSCAN1Q8NBB4 408 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 ZNF417Q8TAU3 575 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 RAPGEF5Q92565 580 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 PTPRN2Q92932 1015 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 CELF6Q96J87 481 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 FRMD6Q96NE9 622 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 CSPG4P5Q96PW8 444 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 ZNF587Q96SQ5 575 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 TCF12Q99081 682 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 LRRC19Q9H756 370 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 LIN7BQ9HAP6 207 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 ZSCAN32Q9NX65 697 aa9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 MBD1Q9UIS9 605 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-219ENST00000576713 PIEZO1Q92508 2521 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms