RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ECT2LQ008S8 904 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 HLTFQ14527 1009 aaKnown RBP eCLIP6.72□□□□□ -1.33
HDAC3-206ENST00000471968 SNAP47Q5SQN1 464 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 GALNT17Q6IS24 598 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 MMS22LQ6ZRQ5 1243 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 LIMS2Q7Z4I7 341 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 ACOT1Q86TX2 421 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 FAM35AQ86V20 835 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 NT5DC4Q86YG4 428 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 MFN1Q8IWA4 741 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 ACBD4Q8NC06 268 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 B3GALNT2Q8NCR0 500 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 CXorf38Q8TB03 319 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 TSACCQ96A04 125 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-206ENST00000471968 STAMBPL1Q96FJ0 436 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 SCARF2Q96GP6 870 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-206ENST00000471968 ZNF559Q9BR84 538 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 RUSC1Q9BVN2 902 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 PDE7BQ9NP56 450 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 TMEM63CQ9P1W3 806 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 STIM2Q9P246 746 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 SCML2Q9UQR0 700 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 BTRCQ9Y297 605 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 ATP8B3O60423 1300 aa6.72□□□□□ -1.33
HDAC3-206ENST00000471968 MDC1Q14676 2089 aaKnown RBP6.72□□□□□ -1.33
HDAC3-206ENST00000471968 SSU72P8A0A1W2PR75 194 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 SERINC4A6NH21 518 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 SLC27A2O14975 620 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 POLR1CO15160 346 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-206ENST00000471968 PHF1O43189 567 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-206ENST00000471968 BEST1O76090 585 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 KIF20AO95235 890 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 IFNA2P01563 188 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 RALAP11233 206 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 PLS3P13797 630 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 AGAP20933 346 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 CSF2RBP32927 897 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 SPAM1P38567 509 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 BLKP51451 505 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 SMSP52788 366 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 HK3P52790 923 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 WNT7BP56706 349 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 RPS21P63220 83 aaKnown RBP6.71□□□□□ -1.34
HDAC3-206ENST00000471968 RBP5P82980 135 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 IL10RAQ13651 578 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 PCOLCEQ15113 449 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 NTRK3Q16288 839 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 KYNUQ16719 465 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 CLPPQ16740 277 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-206ENST00000471968 LONRF1Q17RB8 773 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 EARS2Q5JPH6 523 aaKnown RBP6.71□□□□□ -1.34
HDAC3-206ENST00000471968 PITRM1Q5JRX3 1037 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 VWA5B1Q5TIE3 1220 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 ADALQ6DHV7 355 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 FAAH2Q6GMR7 532 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 SLC39A4Q6P5W5 647 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 MACC1Q6ZN28 852 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 GPRIN1Q7Z2K8 1008 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 ACRBPQ8NEB7 543 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 FAM46DQ8NEK8 389 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 ZMIZ2Q8NF64 920 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 ERMNQ8TAM6 284 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 RUFY2Q8WXA3 655 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 SEC14L1Q92503 715 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 JAKMIP2Q96AA8 810 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 SMARCD1Q96GM5 515 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 LMLNQ96KR4 655 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 AIFM3Q96NN9 605 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 RUFY1Q96T51 708 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 KLF6Q99612 283 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-206ENST00000471968 TREX2Q9BQ50 279 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-206ENST00000471968 SPRTNQ9H040 489 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-206ENST00000471968 FBXO8Q9NRD0 319 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 KRT82Q9NSB4 513 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 C5AR2Q9P296 337 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 SIX4Q9UIU6 781 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 ITGA11Q9UKX5 1188 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 R3HCC1Q9Y3T6 440 aaKnown RBP6.71□□□□□ -1.34
HDAC3-206ENST00000471968 FHOD1Q9Y613 1164 aa6.71□□□□□ -1.34
HDAC3-206ENST00000471968 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.71□□□□□ -1.345e-7■■■■■ 30.2
HDAC3-206ENST00000471968 NYNRINQ9P2P1 1898 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 RHPN2P1A8MT19 583 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 KPNA3O00505 521 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 SMAD7O15105 426 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 BNIP3LO60238 219 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 NEMFO60524 1076 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 ZWINTO95229 277 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 IL18RAPO95256 599 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 IFNAR1P17181 557 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 PDIA3P30101 505 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 NNMTP40261 264 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 MAZP56270 477 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 MAP3K7CLP57077 242 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 ZNF445P59923 1031 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 EXOSC10Q01780 885 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 CENPCQ03188 943 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 CCDC15Q0P6D6 951 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 SGCGQ13326 291 aa6.7□□□□□ -1.34
HDAC3-206ENST00000471968 LBRQ14739 615 aaKnown RBP6.7□□□□□ -1.34
HDAC3-206ENST00000471968 RFWD3Q6PCD5 774 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms