RNA–Protein interactions for RNA: ENST00000413879.1

AC004987.3-201, humanhuman

BASIC

Gene AC004987.3, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.3-201ENST00000413879 CIITAP33076 1130 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 GABRB2P47870 512 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 PGDP52209 483 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 POLGP54098 1239 aaPredicted RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 MFAP4P55083 255 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 KRTAP10-9P60411 292 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 POLR2FP61218 127 aaKnown RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 YPEL5P62699 121 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 TLE3Q04726 772 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 RNASELQ05823 741 aaKnown RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 SLFN5Q08AF3 891 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 CSTF3Q12996 717 aaKnown RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 NFE2L1Q14494 772 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 TEX35Q5T0J7 233 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 STRIP1Q5VSL9 837 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 ETFRF1Q6IPR1 90 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 MSANTD2Q6P1R3 559 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 WDR93Q6P2C0 686 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 OLFM4Q6UX06 510 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 SYNE3Q6ZMZ3 975 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 DENND5BQ6ZUT9 1274 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 ZNF551Q7Z340 670 aaPredicted RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 VRK3Q8IV63 474 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 FSTL5Q8N475 847 aaPredicted RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 RTL3Q8N8U3 475 aaKnown RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 ATAD1Q8NBU5 361 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 ZNF540Q8NDQ6 660 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 TMIEQ8NEW7 156 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 Q8NFD4 153 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 SUN3Q8TAQ9 357 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 CTNNBL1Q8WYA6 563 aaPredicted RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 HDAC11Q96DB2 347 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 EEF2KMTQ96G04 330 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 RBM18Q96H35 190 aaKnown RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 SLC46A1Q96NT5 459 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 TMEM237Q96Q45 408 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 ABHD1Q96SE0 405 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 NAA11Q9BSU3 229 aaPredicted RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 KIFC3Q9BVG8 833 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 FBRSL1Q9HCM7 1045 aaKnown RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 POLE3Q9NRF9 147 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 TAS2R3Q9NYW6 316 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 COQ3Q9NZJ6 369 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 AKAP7Q9P0M2 348 aaPredicted RBP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 TSPYL4Q9UJ04 414 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 AGAP1Q9UPQ3 857 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 FPGT-TNNI3KV9GXZ4 949 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 ADGRF5Q8IZF2 1346 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 IGSF1Q8N6C5 1336 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 TOP2BQ02880 1626 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 TNIKQ9UKE5 1360 aa4.38□□□□□ -1.71
AC004987.3-201ENST00000413879 LOC105369274A0A096LPK9 316 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 LOC102723532A0A0G2JNH3 316 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 LRRC53A6NM62 1247 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 DRGXA6NNA5 263 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 FAM86B1E9PN63 330 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 IFIT3O14879 490 aaKnown RBP4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 MCF2LO15068 1137 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 TGFB1I1O43294 461 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 CTIFO43310 598 aaKnown RBP4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 TSC22D2O75157 780 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 SOCS5O75159 536 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 NDUFS3O75489 264 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 FTCDO95954 541 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 HLA-DOAP06340 250 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 IRF1P10914 325 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 CDK4P11802 303 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 ZNF37AP17032 561 aaPredicted RBP4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 ARF4P18085 180 aaPredicted RBP4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 KCNA3P22001 575 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 PPIFP30405 207 aaKnown RBP4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 ADSSP30520 456 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 HSPA4P34932 840 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 TNNT2P45379 298 aaPredicted RBP4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 GATMP50440 423 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 RAB28P51157 221 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 CHN2P52757 468 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 CAPZA1P52907 286 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 RCAN1P53805 252 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 SLC12A3P55017 1021 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 EFNB1P98172 346 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 TUBB3Q13509 450 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 HYAL4Q2M3T9 481 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 KRT79Q5XKE5 535 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 DRICH1Q6PGQ1 229 aaPredicted RBP4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 OTOAQ7RTW8 1153 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 PLPPR4Q7Z2D5 763 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 GPRIN1Q7Z2K8 1008 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 MIER3Q7Z3K6 550 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 MRGPREQ86SM8 312 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 PEX5LQ8IYB4 626 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 OR4N4Q8N0Y3 316 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 SIX6OS1Q8N1H7 587 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 SYNE4Q8N205 404 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 MRPL43Q8N983 215 aaKnown RBP4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 IQUBQ8NA54 791 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 PDPRQ8NCN5 879 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 MDGA1Q8NFP4 955 aa4.37□□□□□ -1.71
AC004987.3-201ENST00000413879 TSPAN14Q8NG11 270 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms