RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 NSMCE1Q8WV22 266 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 TFB1MQ8WVM0 346 aaKnown RBP31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 MAML1Q92585 1016 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 PBKQ96KB5 322 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 C16orf45Q96MC5 204 aaPredicted RBP31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 CEP41Q9BYV8 373 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 GJB3O75712 270 aa31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 CCNB1P14635 433 aa31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 GKP32189 559 aa31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 EIF3EP60228 445 aaKnown RBP31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 HEATR6Q6AI08 1181 aaKnown RBP31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 SYT10Q6XYQ8 523 aa31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 TMPRSS6Q8IU80 811 aa31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 RYBPQ8N488 228 aaPredicted RBP31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 MRGPRX1Q96LB2 322 aa31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 SMARCAL1Q9NZC9 954 aa31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 SEPT10Q9P0V9 454 aa31.07■■■□□ 2.56
CSNK1E-206ENST00000413574 CTAGE9A4FU28 777 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 H7C0C1 242 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 RNF103O00237 685 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 APBB3O95704 486 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 TDGF1P13385 188 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 MMP13P45452 471 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 ATP5OP48047 213 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 CCNHP51946 323 aaPredicted RBP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 HNRNPDQ14103 355 aaKnown RBP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 ELAVL3Q14576 367 aaKnown RBP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 ZNF235Q14590 738 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 MMAAQ8IVH4 418 aaKnown RBP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 PGBD3Q8N328 593 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 CAMKK1Q8N5S9 505 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 TEX26Q8N6G2 289 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 OR2AP1Q8NGE2 309 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 ATG4AQ8WYN0 398 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 RSPH9Q9H1X1 276 aaPredicted RBP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 BCCIPQ9P287 314 aaKnown RBP eCLIP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 SEPT3Q9UH03 358 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 EML5Q05BV3 1969 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 TTC24A2A3L6 582 aaPredicted RBP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 CTSLP07711 333 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 RECQLP46063 649 aaPredicted RBP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 ZBTB17Q13105 803 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 ANGPT1Q15389 498 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 SIX1Q15475 284 aaPredicted RBP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 LONRF2Q1L5Z9 754 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 PAPD7Q5XG87 772 aaKnown RBP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 FATE1Q969F0 183 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 QKIQ96PU8 341 aaKnown RBP eCLIP31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 PSKH2Q96QS6 385 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 TPSD1Q9BZJ3 242 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 BRD8Q9H0E9 1235 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 NT5MQ9NPB1 228 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 SARDHQ9UL12 918 aa31.06■■■□□ 2.56
CSNK1E-206ENST00000413574 ANKRD36A6QL64 1941 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 MCF2LO15068 1137 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 INSIG1O15503 277 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 GSRP00390 522 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 JCHAINP01591 159 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 RBP3P10745 1247 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 RENBPP51606 427 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 MAXP61244 160 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 SNRPD1P62314 119 aaKnown RBP31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 XRCC4Q13426 336 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 SLC45A4Q5BKX6 768 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 RASGEF1CQ8N431 466 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 TTC13Q8NBP0 860 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 GRIN3AQ8TCU5 1115 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 C1orf54Q8WWF1 131 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 OR8D1Q8WZ84 308 aa31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 RBM22Q9NW64 420 aaKnown RBP eCLIP31.05■■■□□ 2.562e-6■□□□□ 9.4
CSNK1E-206ENST00000413574 EVLQ9UI08 416 aaPredicted RBP31.05■■■□□ 2.56
CSNK1E-206ENST00000413574 GALR2O43603 387 aaPredicted RBP31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 ALDH1A2O94788 518 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 IGSF6O95976 241 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 RPS14P62263 151 aaKnown RBP31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 ZNF33AQ06730 810 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 KIAA1324Q6UXG2 1013 aaKnown RBP31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 RASSF3Q86WH2 238 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 VOPP1Q96AW1 172 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 CCDC114Q96M63 670 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 GDAP1L1Q96MZ0 367 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 ZDHHC6Q9H6R6 413 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 CD93Q9NPY3 652 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 USP34Q70CQ2 3546 aa31.04■■■□□ 2.56
CSNK1E-206ENST00000413574 IL1BP01584 269 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 RBL1P28749 1068 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 CHRNA3P32297 505 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 METAP1P53582 386 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 MYLK3Q32MK0 819 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 POM121L1PQ3SYA9 428 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 IL12RB2Q99665 862 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 DNPEPQ9ULA0 475 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 FARP1Q9Y4F1 1045 aaPredicted RBP31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 TTLL3Q9Y4R7 772 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 WASF2Q9Y6W5 498 aa31.03■■■□□ 2.56
CSNK1E-206ENST00000413574 HACD1B0YJ81 288 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 KRIT1O00522 736 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 HLA-DQB2P05538 268 aa31.02■■■□□ 2.56
CSNK1E-206ENST00000413574 CASQ1P31415 396 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms